RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 RAB11FIP3O75154 756 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 GCKRQ14397 625 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 HDAC5Q9UQL6 1122 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 NWD2Q9ULI1 1742 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 SDSP20132 328 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 PLBD2Q8NHP8 589 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 ATG3Q9NT62 314 aa20.82■□□□□ 0.92
SREK1-212ENST00000522912 NUP188Q5SRE5 1749 aa20.81■□□□□ 0.92
SREK1-212ENST00000522912 TTLL7Q6ZT98 887 aa20.8■□□□□ 0.92
SREK1-212ENST00000522912 BCL9O00512 1426 aa20.8■□□□□ 0.92
SREK1-212ENST00000522912 RHPN1Q8TCX5 695 aa20.8■□□□□ 0.92
SREK1-212ENST00000522912 BICC1Q9H694 974 aaKnown RBP20.8■□□□□ 0.92
SREK1-212ENST00000522912 IL1RAPL2Q9NP60 686 aa20.8■□□□□ 0.92
SREK1-212ENST00000522912 SLIT2O94813 1529 aa20.79■□□□□ 0.92
SREK1-212ENST00000522912 MX1P20591 662 aa20.79■□□□□ 0.92
SREK1-212ENST00000522912 TSHZ3Q63HK5 1081 aa20.79■□□□□ 0.92
SREK1-212ENST00000522912 THRAP3Q9Y2W1 955 aaKnown RBP20.79■□□□□ 0.92
SREK1-212ENST00000522912 CDCA7Q9BWT1 371 aaPredicted RBP20.78■□□□□ 0.92
SREK1-212ENST00000522912 STAP2Q9UGK3 403 aa20.78■□□□□ 0.92
SREK1-212ENST00000522912 ATP5J2-PTCD1G3V325 749 aa20.78■□□□□ 0.92
SREK1-212ENST00000522912 KIF1BPQ96EK5 621 aa20.78■□□□□ 0.92
SREK1-212ENST00000522912 DAXXQ9UER7 740 aaPredicted RBP20.78■□□□□ 0.92
SREK1-212ENST00000522912 SPATA31A5Q5VU36 1347 aa20.78■□□□□ 0.92
SREK1-212ENST00000522912 SPATA31A7Q8IWB4 1347 aa20.78■□□□□ 0.92
SREK1-212ENST00000522912 DOT1LQ8TEK3 1739 aa20.77■□□□□ 0.92
SREK1-212ENST00000522912 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
SREK1-212ENST00000522912 VSIG10Q8N0Z9 540 aa20.77■□□□□ 0.92
SREK1-212ENST00000522912 RBM25P49756 843 aaKnown RBP20.77■□□□□ 0.91
SREK1-212ENST00000522912 HSP90AB4PQ58FF6 505 aa20.77■□□□□ 0.91
SREK1-212ENST00000522912 JARID2Q92833 1246 aaPredicted RBP20.77■□□□□ 0.91
SREK1-212ENST00000522912 PA2G4Q9UQ80 394 aaKnown RBP20.77■□□□□ 0.91
SREK1-212ENST00000522912 EPHA10Q5JZY3 1008 aa20.76■□□□□ 0.91
SREK1-212ENST00000522912 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
SREK1-212ENST00000522912 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.75■□□□□ 0.91
SREK1-212ENST00000522912 DDB1Q16531 1140 aa20.75■□□□□ 0.91
SREK1-212ENST00000522912 NUTM1Q86Y26 1132 aa20.75■□□□□ 0.91
SREK1-212ENST00000522912 TEX13AQ9BXU3 409 aaPredicted RBP20.75■□□□□ 0.91
SREK1-212ENST00000522912 PRIM1P49642 420 aaKnown RBP20.74■□□□□ 0.91
SREK1-212ENST00000522912 SLC4A9Q96Q91 983 aa20.74■□□□□ 0.91
SREK1-212ENST00000522912 SYTL4Q96C24 671 aaPredicted RBP20.73■□□□□ 0.91
SREK1-212ENST00000522912 CASP7P55210 303 aa20.73■□□□□ 0.91
SREK1-212ENST00000522912 OS9Q13438 667 aaPredicted RBP20.73■□□□□ 0.91
SREK1-212ENST00000522912 UBE3BQ7Z3V4 1068 aa20.73■□□□□ 0.91
SREK1-212ENST00000522912 ZBTB3Q9H5J0 574 aa20.73■□□□□ 0.91
SREK1-212ENST00000522912 AOX1Q06278 1338 aa20.73■□□□□ 0.91
SREK1-212ENST00000522912 A0A087WZG4 1122 aa20.72■□□□□ 0.91
SREK1-212ENST00000522912 BECN1Q14457 450 aa20.72■□□□□ 0.91
SREK1-212ENST00000522912 CCDC9Q9Y3X0 531 aaKnown RBP20.72■□□□□ 0.91
SREK1-212ENST00000522912 COL15A1P39059 1388 aa20.72■□□□□ 0.91
SREK1-212ENST00000522912 TJP1Q07157 1748 aa20.72■□□□□ 0.91
SREK1-212ENST00000522912 BARGINQ6ZT62 677 aa20.71■□□□□ 0.91
SREK1-212ENST00000522912 MARCH10Q8NA82 808 aaPredicted RBP20.71■□□□□ 0.91
SREK1-212ENST00000522912 JCADQ9P266 1359 aa20.7■□□□□ 0.9
SREK1-212ENST00000522912 STARD3NLO95772 234 aa20.7■□□□□ 0.9
SREK1-212ENST00000522912 TBC1D2Q9BYX2 928 aa20.7■□□□□ 0.9
SREK1-212ENST00000522912 H7C1W4 665 aa20.7■□□□□ 0.9
SREK1-212ENST00000522912 UNC5CLQ8IV45 518 aa20.7■□□□□ 0.9
SREK1-212ENST00000522912 RABL6Q3YEC7 729 aaPredicted RBP20.69■□□□□ 0.9
SREK1-212ENST00000522912 ERC1Q8IUD2 1116 aa20.69■□□□□ 0.9
SREK1-212ENST00000522912 PI4K2BQ8TCG2 481 aa20.69■□□□□ 0.9
SREK1-212ENST00000522912 KIF2CQ99661 725 aa20.69■□□□□ 0.9
SREK1-212ENST00000522912 CWC25Q9NXE8 425 aaPredicted RBP20.69■□□□□ 0.9
SREK1-212ENST00000522912 SASH1O94885 1247 aa20.68■□□□□ 0.9
SREK1-212ENST00000522912 CYP19A1P11511 503 aaPredicted RBP20.68■□□□□ 0.9
SREK1-212ENST00000522912 CASC1Q6TDU7 716 aa20.68■□□□□ 0.9
SREK1-212ENST00000522912 AK9Q5TCS8 1911 aa20.68■□□□□ 0.9
SREK1-212ENST00000522912 EIF5BO60841 1220 aaKnown RBP20.68■□□□□ 0.9
SREK1-212ENST00000522912 KLHDC4Q8TBB5 520 aa20.68■□□□□ 0.9
SREK1-212ENST00000522912 C8orf37Q96NL8 207 aa20.68■□□□□ 0.9
SREK1-212ENST00000522912 ZNF330Q9Y3S2 320 aaPredicted RBP20.68■□□□□ 0.9
SREK1-212ENST00000522912 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.68■□□□□ 0.9
SREK1-212ENST00000522912 BCL9LQ86UU0 1499 aa20.68■□□□□ 0.9
SREK1-212ENST00000522912 USP42Q9H9J4 1324 aaKnown RBP20.67■□□□□ 0.9
SREK1-212ENST00000522912 RFX5P48382 616 aaPredicted RBP20.67■□□□□ 0.9
SREK1-212ENST00000522912 G3BP1Q13283 466 aaKnown RBP eCLIP20.67■□□□□ 0.9
SREK1-212ENST00000522912 CLASRPQ8N2M8 674 aaKnown RBP20.67■□□□□ 0.9
SREK1-212ENST00000522912 ACSBG1Q96GR2 724 aa20.67■□□□□ 0.9
SREK1-212ENST00000522912 USP26Q9BXU7 913 aa20.67■□□□□ 0.9
SREK1-212ENST00000522912 TRIM6-TRIM34B2RNG4 842 aa20.66■□□□□ 0.9
SREK1-212ENST00000522912 CCDC191Q8NCU4 936 aa20.66■□□□□ 0.9
SREK1-212ENST00000522912 NGLY1Q96IV0 654 aa20.66■□□□□ 0.9
SREK1-212ENST00000522912 SIL1Q9H173 461 aa20.66■□□□□ 0.9
SREK1-212ENST00000522912 RILPL2Q969X0 211 aa20.66■□□□□ 0.9
SREK1-212ENST00000522912 ISCA1Q9BUE6 129 aa20.66■□□□□ 0.9
SREK1-212ENST00000522912 FOXO4P98177 505 aa20.65■□□□□ 0.9
SREK1-212ENST00000522912 TCIRG1Q13488 830 aa20.65■□□□□ 0.9
SREK1-212ENST00000522912 COPRSQ9NQ92 184 aa20.65■□□□□ 0.9
SREK1-212ENST00000522912 PTPN12Q05209 780 aaKnown RBP20.64■□□□□ 0.89
SREK1-212ENST00000522912 VPS72Q15906 364 aa20.64■□□□□ 0.89
SREK1-212ENST00000522912 RTL5Q5HYW3 569 aaPredicted RBP20.64■□□□□ 0.89
SREK1-212ENST00000522912 KIF6Q6ZMV9 814 aa20.64■□□□□ 0.89
SREK1-212ENST00000522912 TTC41PQ6P2S7 1318 aa20.64■□□□□ 0.89
SREK1-212ENST00000522912 ERC2O15083 957 aa20.63■□□□□ 0.89
SREK1-212ENST00000522912 CHMLP26374 656 aa20.63■□□□□ 0.89
SREK1-212ENST00000522912 FAM98CQ17RN3 349 aaKnown RBP20.63■□□□□ 0.89
SREK1-212ENST00000522912 ZBTB1Q9Y2K1 713 aa20.63■□□□□ 0.89
SREK1-212ENST00000522912 A0A0G2JS52 829 aa20.63■□□□□ 0.89
SREK1-212ENST00000522912 MAP4K4O95819 1239 aaPredicted RBP20.63■□□□□ 0.89
SREK1-212ENST00000522912 LMBR1LQ6UX01 489 aa20.63■□□□□ 0.89
SREK1-212ENST00000522912 AACSQ86V21 672 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms