RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NBPF15Q8N660 670 aa31.78■■■□□ 2.68
COL13A1-214ENST00000522165 USP26Q9BXU7 913 aa31.78■■■□□ 2.68
COL13A1-214ENST00000522165 BICC1Q9H694 974 aaKnown RBP31.78■■■□□ 2.68
COL13A1-214ENST00000522165 HSCBQ8IWL3 235 aa31.77■■■□□ 2.68
COL13A1-214ENST00000522165 ANTXR1Q9H6X2 564 aa31.77■■■□□ 2.68
COL13A1-214ENST00000522165 ARFGEF2Q9Y6D5 1785 aa31.77■■■□□ 2.68
COL13A1-214ENST00000522165 PLBD2Q8NHP8 589 aa31.77■■■□□ 2.68
COL13A1-214ENST00000522165 SLKQ9H2G2 1235 aaPredicted RBP31.76■■■□□ 2.68
COL13A1-214ENST00000522165 TMOD3Q9NYL9 352 aa31.76■■■□□ 2.67
COL13A1-214ENST00000522165 PTCD1O75127 700 aaKnown RBP31.75■■■□□ 2.67
COL13A1-214ENST00000522165 OS9Q13438 667 aaPredicted RBP31.75■■■□□ 2.67
COL13A1-214ENST00000522165 NFKBIBQ15653 356 aa31.75■■■□□ 2.67
COL13A1-214ENST00000522165 ERC2O15083 957 aa31.73■■■□□ 2.67
COL13A1-214ENST00000522165 PA2G4Q9UQ80 394 aaKnown RBP31.73■■■□□ 2.67
COL13A1-214ENST00000522165 REC8O95072 547 aa31.72■■■□□ 2.67
COL13A1-214ENST00000522165 ERC1Q8IUD2 1116 aa31.72■■■□□ 2.67
COL13A1-214ENST00000522165 PLCH1Q4KWH8 1693 aa31.72■■■□□ 2.67
COL13A1-214ENST00000522165 AFDNP55196 1824 aaKnown RBP31.72■■■□□ 2.67
COL13A1-214ENST00000522165 TRIM6-TRIM34B2RNG4 842 aa31.71■■■□□ 2.67
COL13A1-214ENST00000522165 A1BGP04217 495 aa31.71■■■□□ 2.67
COL13A1-214ENST00000522165 PI4K2BQ8TCG2 481 aa31.71■■■□□ 2.67
COL13A1-214ENST00000522165 RILPL2Q969X0 211 aa31.7■■■□□ 2.67
COL13A1-214ENST00000522165 USP42Q9H9J4 1324 aaKnown RBP31.7■■■□□ 2.66
COL13A1-214ENST00000522165 UNC5CLQ8IV45 518 aa31.69■■■□□ 2.66
COL13A1-214ENST00000522165 PIGBQ92521 554 aa31.69■■■□□ 2.66
COL13A1-214ENST00000522165 CLASRPQ8N2M8 674 aaKnown RBP31.68■■■□□ 2.66
COL13A1-214ENST00000522165 COL15A1P39059 1388 aa31.68■■■□□ 2.66
COL13A1-214ENST00000522165 PHLPP1O60346 1717 aa31.68■■■□□ 2.66
COL13A1-214ENST00000522165 CHMLP26374 656 aa31.68■■■□□ 2.66
COL13A1-214ENST00000522165 EPHA10Q5JZY3 1008 aa31.68■■■□□ 2.66
COL13A1-214ENST00000522165 ATP5J2-PTCD1G3V325 749 aa31.67■■■□□ 2.66
COL13A1-214ENST00000522165 TTLL7Q6ZT98 887 aa31.67■■■□□ 2.66
COL13A1-214ENST00000522165 ESYT1Q9BSJ8 1104 aa31.67■■■□□ 2.66
COL13A1-214ENST00000522165 RBM42Q9BTD8 480 aaKnown RBP31.67■■■□□ 2.66
COL13A1-214ENST00000522165 SPRYD3Q8NCJ5 442 aa31.66■■■□□ 2.66
COL13A1-214ENST00000522165 NUP188Q5SRE5 1749 aa31.66■■■□□ 2.66
COL13A1-214ENST00000522165 TTC41PQ6P2S7 1318 aa31.66■■■□□ 2.66
COL13A1-214ENST00000522165 ASAP1Q9ULH1 1129 aa31.65■■■□□ 2.66
COL13A1-214ENST00000522165 ITGB4P16144 1822 aa31.65■■■□□ 2.66
COL13A1-214ENST00000522165 G3BP1Q13283 466 aaKnown RBP eCLIP31.64■■■□□ 2.66
COL13A1-214ENST00000522165 RABEP1Q15276 862 aa31.64■■■□□ 2.66
COL13A1-214ENST00000522165 UBE3BQ7Z3V4 1068 aa31.64■■■□□ 2.66
COL13A1-214ENST00000522165 WNK3Q9BYP7 1800 aa31.63■■■□□ 2.65
COL13A1-214ENST00000522165 A0A087WZG4 1122 aa31.63■■■□□ 2.65
COL13A1-214ENST00000522165 VSIG10Q8N0Z9 540 aa31.63■■■□□ 2.65
COL13A1-214ENST00000522165 ATG3Q9NT62 314 aa31.63■■■□□ 2.65
COL13A1-214ENST00000522165 LRP6O75581 1613 aa31.63■■■□□ 2.65
COL13A1-214ENST00000522165 SASH1O94885 1247 aa31.63■■■□□ 2.65
COL13A1-214ENST00000522165 CD2BP2O95400 341 aaKnown RBP31.63■■■□□ 2.65
COL13A1-214ENST00000522165 CASP7P55210 303 aa31.63■■■□□ 2.65
COL13A1-214ENST00000522165 JARID2Q92833 1246 aaPredicted RBP31.63■■■□□ 2.65
COL13A1-214ENST00000522165 EXOC5O00471 708 aa31.62■■■□□ 2.65
COL13A1-214ENST00000522165 RABL6Q3YEC7 729 aaPredicted RBP31.62■■■□□ 2.65
COL13A1-214ENST00000522165 TEX13AQ9BXU3 409 aaPredicted RBP31.61■■■□□ 2.65
COL13A1-214ENST00000522165 GLRX3O76003 335 aaKnown RBP31.6■■■□□ 2.65
COL13A1-214ENST00000522165 BCL9O00512 1426 aa31.6■■■□□ 2.65
COL13A1-214ENST00000522165 ADAMTS2O95450 1211 aa31.6■■■□□ 2.65
COL13A1-214ENST00000522165 IFIT2P09913 472 aaKnown RBP31.6■■■□□ 2.65
COL13A1-214ENST00000522165 AK9Q5TCS8 1911 aa31.59■■■□□ 2.65
COL13A1-214ENST00000522165 FRAT2O75474 233 aaPredicted RBP31.59■■■□□ 2.65
COL13A1-214ENST00000522165 H7C1W4 665 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 MAP4K4O95819 1239 aaPredicted RBP31.58■■■□□ 2.65
COL13A1-214ENST00000522165 COPRSQ9NQ92 184 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 ECHDC1Q9NTX5 307 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 NRAPQ86VF7 1730 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 K7ELQ4 463 aaPredicted RBP31.58■■■□□ 2.65
COL13A1-214ENST00000522165 RFX5P48382 616 aaPredicted RBP31.58■■■□□ 2.65
COL13A1-214ENST00000522165 AACSQ86V21 672 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 DNAJC10Q8IXB1 793 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 CNTROBQ8N137 903 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 KLHDC4Q8TBB5 520 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 GPATCH3Q96I76 525 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 SIL1Q9H173 461 aa31.58■■■□□ 2.65
COL13A1-214ENST00000522165 ZBTB3Q9H5J0 574 aa31.57■■■□□ 2.64
COL13A1-214ENST00000522165 CWC25Q9NXE8 425 aaPredicted RBP31.57■■■□□ 2.64
COL13A1-214ENST00000522165 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.57■■■□□ 2.64
COL13A1-214ENST00000522165 CDCA7Q9BWT1 371 aaPredicted RBP31.56■■■□□ 2.64
COL13A1-214ENST00000522165 CHMP5Q9NZZ3 219 aa31.56■■■□□ 2.64
COL13A1-214ENST00000522165 EAF2Q96CJ1 260 aaPredicted RBP31.55■■■□□ 2.64
COL13A1-214ENST00000522165 SPATA31A1Q5TZJ5 1347 aa31.55■■■□□ 2.64
COL13A1-214ENST00000522165 TJP1Q07157 1748 aa31.54■■■□□ 2.64
COL13A1-214ENST00000522165 DDIT3P35638 169 aa31.54■■■□□ 2.64
COL13A1-214ENST00000522165 CCDC191Q8NCU4 936 aa31.54■■■□□ 2.64
COL13A1-214ENST00000522165 THRAP3Q9Y2W1 955 aaKnown RBP31.54■■■□□ 2.64
COL13A1-214ENST00000522165 STARD3NLO95772 234 aa31.53■■■□□ 2.64
COL13A1-214ENST00000522165 PTPN12Q05209 780 aaKnown RBP31.53■■■□□ 2.64
COL13A1-214ENST00000522165 TOM1O60784 492 aa31.52■■■□□ 2.64
COL13A1-214ENST00000522165 ANO2Q9NQ90 1003 aa31.52■■■□□ 2.64
COL13A1-214ENST00000522165 FOXO4P98177 505 aa31.52■■■□□ 2.64
COL13A1-214ENST00000522165 EPB41L2O43491 1005 aaKnown RBP31.5■■■□□ 2.63
COL13A1-214ENST00000522165 PIP4K2BP78356 416 aa31.5■■■□□ 2.63
COL13A1-214ENST00000522165 IL25Q9H293 177 aa31.5■■■□□ 2.63
COL13A1-214ENST00000522165 LMBR1LQ6UX01 489 aa31.5■■■□□ 2.63
COL13A1-214ENST00000522165 CCDC8Q9H0W5 538 aaPredicted RBP31.5■■■□□ 2.63
COL13A1-214ENST00000522165 ISCA1Q9BUE6 129 aa31.49■■■□□ 2.63
COL13A1-214ENST00000522165 NUTM2BA6NNL0 878 aaPredicted RBP31.48■■■□□ 2.63
COL13A1-214ENST00000522165 NUTM2EB1AL46 878 aaPredicted RBP31.48■■■□□ 2.63
COL13A1-214ENST00000522165 MCCP23508 829 aa31.48■■■□□ 2.63
COL13A1-214ENST00000522165 NUTM2AQ8IVF1 878 aaPredicted RBP31.48■■■□□ 2.63
COL13A1-214ENST00000522165 SLC4A9Q96Q91 983 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms