RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 MIS18AQ9NYP9 233 aa27.66■■■□□ 2.02
PABPC1-218ENST00000521865 SBF1O95248 1867 aa27.66■■■□□ 2.02
PABPC1-218ENST00000521865 STYK1Q6J9G0 422 aa27.65■■■□□ 2.02
PABPC1-218ENST00000521865 DPY19L2Q6NUT2 758 aa27.65■■■□□ 2.02
PABPC1-218ENST00000521865 MASTLQ96GX5 879 aa27.65■■■□□ 2.02
PABPC1-218ENST00000521865 SRGNP10124 158 aa27.64■■■□□ 2.02
PABPC1-218ENST00000521865 ERFEQ4G0M1 354 aa27.64■■■□□ 2.02
PABPC1-218ENST00000521865 PRPF40BQ6NWY9 871 aaKnown RBP27.64■■■□□ 2.02
PABPC1-218ENST00000521865 TAOK3Q9H2K8 898 aa27.64■■■□□ 2.02
PABPC1-218ENST00000521865 TNRC6CQ9HCJ0 1690 aaKnown RBP27.64■■■□□ 2.02
PABPC1-218ENST00000521865 NBPF26B4DH59 902 aa27.63■■■□□ 2.01
PABPC1-218ENST00000521865 NBPF10Q6P3W6 841 aaKnown RBP27.63■■■□□ 2.01
PABPC1-218ENST00000521865 NBPF15Q8N660 670 aa27.63■■■□□ 2.01
PABPC1-218ENST00000521865 NIP7Q9Y221 180 aaKnown RBP eCLIP27.63■■■□□ 2.01
PABPC1-218ENST00000521865 FAM177BA6PVY3 158 aa27.62■■■□□ 2.01
PABPC1-218ENST00000521865 ANKRD31Q8N7Z5 1873 aa27.61■■■□□ 2.01
PABPC1-218ENST00000521865 SOGA3Q5TF21 947 aa27.61■■■□□ 2.01
PABPC1-218ENST00000521865 TPTE2Q6XPS3 522 aa27.61■■■□□ 2.01
PABPC1-218ENST00000521865 PNISRQ8TF01 805 aaKnown RBP27.61■■■□□ 2.01
PABPC1-218ENST00000521865 NGEFQ8N5V2 710 aa27.6■■■□□ 2.01
PABPC1-218ENST00000521865 COL11A2P13942 1736 aaPredicted RBP27.59■■■□□ 2.01
PABPC1-218ENST00000521865 BCORQ6W2J9 1755 aa27.58■■■□□ 2.01
PABPC1-218ENST00000521865 GTF2E1P29083 439 aaPredicted RBP27.58■■■□□ 2.01
PABPC1-218ENST00000521865 KLRG1Q96E93 195 aa27.58■■■□□ 2.01
PABPC1-218ENST00000521865 MAPK8IP3Q9UPT6 1336 aa27.58■■■□□ 2.01
PABPC1-218ENST00000521865 PNNQ9H307 717 aaKnown RBP27.57■■■□□ 2
PABPC1-218ENST00000521865 WDR90Q96KV7 1748 aa27.57■■■□□ 2
PABPC1-218ENST00000521865 LTBP3Q9NS15 1303 aa27.57■■■□□ 2
PABPC1-218ENST00000521865 TIAM2Q8IVF5 1701 aa27.56■■■□□ 2
PABPC1-218ENST00000521865 RGL2O15211 777 aa27.56■■■□□ 2
PABPC1-218ENST00000521865 NPR1P16066 1061 aa27.56■■■□□ 2
PABPC1-218ENST00000521865 NFE2L2Q16236 605 aa27.56■■■□□ 2
PABPC1-218ENST00000521865 HLFQ16534 295 aa27.55■■■□□ 2
PABPC1-218ENST00000521865 PLEKHF1Q96S99 279 aa27.55■■■□□ 2
PABPC1-218ENST00000521865 THUMPD2Q9BTF0 503 aaKnown RBP27.55■■■□□ 2
PABPC1-218ENST00000521865 RRP7AQ9Y3A4 280 aaKnown RBP27.55■■■□□ 2
PABPC1-218ENST00000521865 CCDC93Q567U6 631 aa27.54■■■□□ 2
PABPC1-218ENST00000521865 POTECB2RU33 542 aa27.52■■■□□ 2
PABPC1-218ENST00000521865 EIF4A1P60842 406 aaKnown RBP27.52■■■□□ 2
PABPC1-218ENST00000521865 KIF6Q6ZMV9 814 aa27.52■■■□□ 2
PABPC1-218ENST00000521865 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
PABPC1-218ENST00000521865 MYL6BP14649 208 aa27.51■■□□□ 1.99
PABPC1-218ENST00000521865 KLRG2A4D1S0 409 aaPredicted RBP27.5■■□□□ 1.99
PABPC1-218ENST00000521865 SLX4Q8IY92 1834 aa27.5■■□□□ 1.99
PABPC1-218ENST00000521865 C7orf43Q8WVR3 580 aa27.49■■□□□ 1.99
PABPC1-218ENST00000521865 NYXQ9GZU5 481 aa27.49■■□□□ 1.99
PABPC1-218ENST00000521865 ALDH1B1P30837 517 aa27.48■■□□□ 1.99
PABPC1-218ENST00000521865 CCDC88AQ3V6T2 1871 aa27.48■■□□□ 1.99
PABPC1-218ENST00000521865 MAP3K15Q6ZN16 1313 aa27.47■■□□□ 1.99
PABPC1-218ENST00000521865 FER1L6Q2WGJ9 1857 aa27.47■■□□□ 1.99
PABPC1-218ENST00000521865 ERVV-1B6SEH8 477 aa27.47■■□□□ 1.99
PABPC1-218ENST00000521865 FKBP4Q02790 459 aaKnown RBP eCLIP27.47■■□□□ 1.99
PABPC1-218ENST00000521865 TTLL7Q6ZT98 887 aa27.47■■□□□ 1.99
PABPC1-218ENST00000521865 JMYQ8N9B5 988 aa27.47■■□□□ 1.99
PABPC1-218ENST00000521865 OLFM4Q6UX06 510 aa27.46■■□□□ 1.99
PABPC1-218ENST00000521865 NUTM1Q86Y26 1132 aa27.46■■□□□ 1.99
PABPC1-218ENST00000521865 RTKN2Q8IZC4 609 aa27.46■■□□□ 1.99
PABPC1-218ENST00000521865 ZBTB3Q9H5J0 574 aa27.46■■□□□ 1.99
PABPC1-218ENST00000521865 ZNF277Q9NRM2 450 aaPredicted RBP27.46■■□□□ 1.99
PABPC1-218ENST00000521865 TSPYL4Q9UJ04 414 aa27.46■■□□□ 1.99
PABPC1-218ENST00000521865 GPTP24298 496 aa27.45■■□□□ 1.98
PABPC1-218ENST00000521865 CHADLQ6NUI6 762 aa27.44■■□□□ 1.98
PABPC1-218ENST00000521865 LAMB4A4D0S4 1761 aa27.43■■□□□ 1.98
PABPC1-218ENST00000521865 CACNA1SQ13698 1873 aa27.43■■□□□ 1.98
PABPC1-218ENST00000521865 IQCA1LA6NCM1 817 aa27.43■■□□□ 1.98
PABPC1-218ENST00000521865 RIPK4P57078 832 aa27.43■■□□□ 1.98
PABPC1-218ENST00000521865 RALBP1Q15311 655 aa27.42■■□□□ 1.98
PABPC1-218ENST00000521865 RPGRQ92834 1020 aaKnown RBP27.42■■□□□ 1.98
PABPC1-218ENST00000521865 ABCC12Q96J65 1359 aa27.42■■□□□ 1.98
PABPC1-218ENST00000521865 KDM3BQ7LBC6 1761 aa27.41■■□□□ 1.98
PABPC1-218ENST00000521865 POTEIP0CG38 1075 aa27.41■■□□□ 1.98
PABPC1-218ENST00000521865 POTEJP0CG39 1038 aa27.41■■□□□ 1.98
PABPC1-218ENST00000521865 ARFGEF2Q9Y6D5 1785 aa27.4■■□□□ 1.98
PABPC1-218ENST00000521865 EIF2S2P20042 333 aaKnown RBP27.4■■□□□ 1.98
PABPC1-218ENST00000521865 SYNE4Q8N205 404 aa27.4■■□□□ 1.98
PABPC1-218ENST00000521865 ERBB4Q15303 1308 aa27.4■■□□□ 1.98
PABPC1-218ENST00000521865 DLG5Q8TDM6 1919 aa27.39■■□□□ 1.98
PABPC1-218ENST00000521865 IARSP41252 1262 aaKnown RBP27.39■■□□□ 1.98
PABPC1-218ENST00000521865 DICER1Q9UPY3 1922 aaKnown RBP27.39■■□□□ 1.97
PABPC1-218ENST00000521865 UBN2Q6ZU65 1347 aa27.39■■□□□ 1.97
PABPC1-218ENST00000521865 CRY2Q49AN0 593 aa27.38■■□□□ 1.97
PABPC1-218ENST00000521865 SUSD4Q5VX71 490 aa27.38■■□□□ 1.97
PABPC1-218ENST00000521865 ZNF541Q9H0D2 1346 aa27.38■■□□□ 1.97
PABPC1-218ENST00000521865 LMOD3Q0VAK6 560 aa27.37■■□□□ 1.97
PABPC1-218ENST00000521865 GIGYF2Q6Y7W6 1299 aaKnown RBP27.37■■□□□ 1.97
PABPC1-218ENST00000521865 L3MBTL3Q96JM7 780 aaPredicted RBP27.37■■□□□ 1.97
PABPC1-218ENST00000521865 EAPPQ56P03 285 aaPredicted RBP27.36■■□□□ 1.97
PABPC1-218ENST00000521865 TAF1DQ9H5J8 278 aaPredicted RBP27.36■■□□□ 1.97
PABPC1-218ENST00000521865 IBTKQ9P2D0 1353 aaPredicted RBP27.35■■□□□ 1.97
PABPC1-218ENST00000521865 TMPOP42166 694 aaKnown RBP27.35■■□□□ 1.97
PABPC1-218ENST00000521865 PPP1R42Q7Z4L9 355 aa27.35■■□□□ 1.97
PABPC1-218ENST00000521865 LDHDQ86WU2 507 aa27.35■■□□□ 1.97
PABPC1-218ENST00000521865 ZNF34Q8IZ26 560 aa27.35■■□□□ 1.97
PABPC1-218ENST00000521865 JDP2Q8WYK2 163 aa27.35■■□□□ 1.97
PABPC1-218ENST00000521865 RBM17Q96I25 401 aaKnown RBP27.35■■□□□ 1.97
PABPC1-218ENST00000521865 TCERG1O14776 1098 aaKnown RBP27.34■■□□□ 1.97
PABPC1-218ENST00000521865 DDX10Q13206 875 aaKnown RBP27.34■■□□□ 1.97
PABPC1-218ENST00000521865 NEUROD2Q15784 382 aa27.34■■□□□ 1.97
PABPC1-218ENST00000521865 CC2D2BQ6DHV5 1058 aa27.34■■□□□ 1.97
PABPC1-218ENST00000521865 HACL1Q9UJ83 578 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms