RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 DUSP27Q5VZP5 1158 aa12.27□□□□□ -0.45
CLK4-209ENST00000521621 KIF6Q6ZMV9 814 aa12.26□□□□□ -0.45
CLK4-209ENST00000521621 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
CLK4-209ENST00000521621 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
CLK4-209ENST00000521621 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
CLK4-209ENST00000521621 HSP90AB3PQ58FF7 597 aa12.26□□□□□ -0.45
CLK4-209ENST00000521621 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
CLK4-209ENST00000521621 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
CLK4-209ENST00000521621 SERPINB2P05120 415 aa12.25□□□□□ -0.45
CLK4-209ENST00000521621 TBC1D9BQ66K14 1250 aa12.25□□□□□ -0.45
CLK4-209ENST00000521621 COL11A2P13942 1736 aaPredicted RBP12.25□□□□□ -0.45
CLK4-209ENST00000521621 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
CLK4-209ENST00000521621 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
CLK4-209ENST00000521621 BRIP1Q9BX63 1249 aa12.25□□□□□ -0.45
CLK4-209ENST00000521621 FANCIQ9NVI1 1328 aa12.25□□□□□ -0.45
CLK4-209ENST00000521621 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 CCDC30Q5VVM6 783 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 ZNF428Q96B54 188 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 SETDB2Q96T68 719 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 TBC1D2BQ9UPU7 963 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 CHD4Q14839 1912 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
CLK4-209ENST00000521621 FAM9BQ8IZU0 186 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 PLBD2Q8NHP8 589 aa12.24□□□□□ -0.45
CLK4-209ENST00000521621 KCNA3P22001 575 aa12.23□□□□□ -0.45
CLK4-209ENST00000521621 GOLGA2Q08379 1002 aa12.23□□□□□ -0.45
CLK4-209ENST00000521621 C8orf58Q8NAV2 365 aa12.23□□□□□ -0.45
CLK4-209ENST00000521621 NLGN2Q8NFZ4 835 aa12.23□□□□□ -0.45
CLK4-209ENST00000521621 E9PSI1 815 aa12.23□□□□□ -0.45
CLK4-209ENST00000521621 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
CLK4-209ENST00000521621 PDE6BP35913 854 aa12.23□□□□□ -0.45
CLK4-209ENST00000521621 LAS1LQ9Y4W2 734 aaKnown RBP12.23□□□□□ -0.45
CLK4-209ENST00000521621 SLC10A5Q5PT55 438 aa12.22□□□□□ -0.45
CLK4-209ENST00000521621 PRR5LQ6MZQ0 368 aa12.22□□□□□ -0.45
CLK4-209ENST00000521621 CHPF2Q9P2E5 772 aa12.22□□□□□ -0.45
CLK4-209ENST00000521621 STYK1Q6J9G0 422 aa12.21□□□□□ -0.45
CLK4-209ENST00000521621 TPTE2Q6XPS3 522 aa12.21□□□□□ -0.45
CLK4-209ENST00000521621 TTLL7Q6ZT98 887 aa12.21□□□□□ -0.45
CLK4-209ENST00000521621 ST5P78524 1137 aa12.21□□□□□ -0.46
CLK4-209ENST00000521621 HLFQ16534 295 aa12.21□□□□□ -0.46
CLK4-209ENST00000521621 KRT24Q2M2I5 525 aa12.21□□□□□ -0.46
CLK4-209ENST00000521621 PROSER3Q2NL68 480 aa12.21□□□□□ -0.46
CLK4-209ENST00000521621 TWISTNBQ3B726 338 aaPredicted RBP12.21□□□□□ -0.46
CLK4-209ENST00000521621 VAMP4O75379 141 aa12.2□□□□□ -0.46
CLK4-209ENST00000521621 TCIRG1Q13488 830 aa12.2□□□□□ -0.46
CLK4-209ENST00000521621 ISCA1Q9BUE6 129 aa12.2□□□□□ -0.46
CLK4-209ENST00000521621 TNRC6CQ9HCJ0 1690 aaKnown RBP12.2□□□□□ -0.46
CLK4-209ENST00000521621 DDX60Q8IY21 1712 aaKnown RBP12.2□□□□□ -0.46
CLK4-209ENST00000521621 EIF2S2P20042 333 aaKnown RBP12.2□□□□□ -0.46
CLK4-209ENST00000521621 SLFN5Q08AF3 891 aa12.2□□□□□ -0.46
CLK4-209ENST00000521621 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
CLK4-209ENST00000521621 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
CLK4-209ENST00000521621 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
CLK4-209ENST00000521621 MYL6BP14649 208 aa12.19□□□□□ -0.46
CLK4-209ENST00000521621 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
CLK4-209ENST00000521621 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
CLK4-209ENST00000521621 PIM2Q9P1W9 311 aa12.19□□□□□ -0.46
CLK4-209ENST00000521621 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLK4-209ENST00000521621 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
CLK4-209ENST00000521621 MIER1Q8N108 512 aa12.19□□□□□ -0.46
CLK4-209ENST00000521621 NTSR2O95665 410 aa12.18□□□□□ -0.46
CLK4-209ENST00000521621 DPEP1P16444 411 aa12.18□□□□□ -0.46
CLK4-209ENST00000521621 UBN2Q6ZU65 1347 aa12.18□□□□□ -0.46
CLK4-209ENST00000521621 DDX58O95786 925 aaKnown RBP12.18□□□□□ -0.46
CLK4-209ENST00000521621 PIP4K2AP48426 406 aaPredicted RBP12.18□□□□□ -0.46
CLK4-209ENST00000521621 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
CLK4-209ENST00000521621 TSPYL6Q8N831 410 aa12.18□□□□□ -0.46
CLK4-209ENST00000521621 TSR2Q969E8 191 aaKnown RBP12.18□□□□□ -0.46
CLK4-209ENST00000521621 HOXA10P31260 410 aaPredicted RBP12.18□□□□□ -0.46
CLK4-209ENST00000521621 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
CLK4-209ENST00000521621 NBPF5PQ86XG9 351 aaPredicted RBP12.18□□□□□ -0.46
CLK4-209ENST00000521621 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
CLK4-209ENST00000521621 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
CLK4-209ENST00000521621 LRRC37AA6NMS7 1700 aa12.17□□□□□ -0.46
CLK4-209ENST00000521621 H0YIN7 160 aa12.17□□□□□ -0.46
CLK4-209ENST00000521621 YBX3P16989 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLK4-209ENST00000521621 STK31Q9BXU1 1019 aa12.17□□□□□ -0.46
CLK4-209ENST00000521621 ADCY9O60503 1353 aa12.17□□□□□ -0.46
CLK4-209ENST00000521621 NLRP10Q86W26 655 aa12.17□□□□□ -0.46
CLK4-209ENST00000521621 LTBP3Q9NS15 1303 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 SRGNP10124 158 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
CLK4-209ENST00000521621 NPR1P16066 1061 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
CLK4-209ENST00000521621 SOGA3Q5TF21 947 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 CNKSR1Q969H4 720 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 MASTLQ96GX5 879 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 ZNF330Q9Y3S2 320 aaPredicted RBP12.16□□□□□ -0.46
CLK4-209ENST00000521621 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
CLK4-209ENST00000521621 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
CLK4-209ENST00000521621 METTL22Q9BUU2 404 aaPredicted RBP12.16□□□□□ -0.46
CLK4-209ENST00000521621 UTP14AQ9BVJ6 771 aaKnown RBP12.16□□□□□ -0.46
CLK4-209ENST00000521621 ZC3H4Q9UPT8 1303 aaKnown RBP12.15□□□□□ -0.46
CLK4-209ENST00000521621 SUSD4Q5VX71 490 aa12.15□□□□□ -0.46
CLK4-209ENST00000521621 C2CD5Q86YS7 1000 aa12.15□□□□□ -0.46
CLK4-209ENST00000521621 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
CLK4-209ENST00000521621 ZBTB3Q9H5J0 574 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms