RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ERBB4Q15303 1308 aa22.34■■□□□ 1.17
SQLE-205ENST00000521232 HLFQ16534 295 aa22.34■■□□□ 1.17
SQLE-205ENST00000521232 CCDC24Q8N4L8 307 aa22.34■■□□□ 1.17
SQLE-205ENST00000521232 ERVV-1B6SEH8 477 aa22.33■■□□□ 1.17
SQLE-205ENST00000521232 NGEFQ8N5V2 710 aa22.33■■□□□ 1.17
SQLE-205ENST00000521232 NIP7Q9Y221 180 aaKnown RBP eCLIP22.33■■□□□ 1.17
SQLE-205ENST00000521232 MYL6BP14649 208 aa22.32■■□□□ 1.16
SQLE-205ENST00000521232 ST5P78524 1137 aa22.32■■□□□ 1.16
SQLE-205ENST00000521232 NBPF5PQ86XG9 351 aaPredicted RBP22.32■■□□□ 1.16
SQLE-205ENST00000521232 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
SQLE-205ENST00000521232 NPHP1O15259 732 aa22.31■■□□□ 1.16
SQLE-205ENST00000521232 C1QTNF8P60827 252 aa22.31■■□□□ 1.16
SQLE-205ENST00000521232 TPTE2Q6XPS3 522 aa22.31■■□□□ 1.16
SQLE-205ENST00000521232 TTLL7Q6ZT98 887 aa22.31■■□□□ 1.16
SQLE-205ENST00000521232 MAP3K15Q6ZN16 1313 aa22.31■■□□□ 1.16
SQLE-205ENST00000521232 EIF2S2P20042 333 aaKnown RBP22.3■■□□□ 1.16
SQLE-205ENST00000521232 PDIA6Q15084 440 aa22.3■■□□□ 1.16
SQLE-205ENST00000521232 NUP98P52948 1817 aa22.29■■□□□ 1.16
SQLE-205ENST00000521232 SBF1O95248 1867 aa22.29■■□□□ 1.16
SQLE-205ENST00000521232 APAF1O14727 1248 aa22.29■■□□□ 1.16
SQLE-205ENST00000521232 C9orf131Q5VYM1 1079 aa22.29■■□□□ 1.16
SQLE-205ENST00000521232 KIF6Q6ZMV9 814 aa22.29■■□□□ 1.16
SQLE-205ENST00000521232 LRP10Q7Z4F1 713 aa22.29■■□□□ 1.16
SQLE-205ENST00000521232 ZNF622Q969S3 477 aaKnown RBP eCLIP22.29■■□□□ 1.16
SQLE-205ENST00000521232 CCDC184Q52MB2 194 aa22.28■■□□□ 1.16
SQLE-205ENST00000521232 ZNF526Q8TF50 670 aaPredicted RBP22.28■■□□□ 1.16
SQLE-205ENST00000521232 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
SQLE-205ENST00000521232 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
SQLE-205ENST00000521232 KLRG2A4D1S0 409 aaPredicted RBP22.27■■□□□ 1.16
SQLE-205ENST00000521232 SRGNP10124 158 aa22.27■■□□□ 1.16
SQLE-205ENST00000521232 COL11A2P13942 1736 aaPredicted RBP22.26■■□□□ 1.15
SQLE-205ENST00000521232 STYK1Q6J9G0 422 aa22.26■■□□□ 1.15
SQLE-205ENST00000521232 MASTLQ96GX5 879 aa22.26■■□□□ 1.15
SQLE-205ENST00000521232 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
SQLE-205ENST00000521232 CNKSR1Q969H4 720 aa22.25■■□□□ 1.15
SQLE-205ENST00000521232 ZBTB3Q9H5J0 574 aa22.25■■□□□ 1.15
SQLE-205ENST00000521232 FAM177BA6PVY3 158 aa22.24■■□□□ 1.15
SQLE-205ENST00000521232 ZNF853P0CG23 659 aa22.24■■□□□ 1.15
SQLE-205ENST00000521232 PROSER3Q2NL68 480 aa22.24■■□□□ 1.15
SQLE-205ENST00000521232 GIGYF2Q6Y7W6 1299 aaKnown RBP22.24■■□□□ 1.15
SQLE-205ENST00000521232 RNF181Q9P0P0 153 aa22.24■■□□□ 1.15
SQLE-205ENST00000521232 HOXB7P09629 217 aa22.23■■□□□ 1.15
SQLE-205ENST00000521232 ZNF34Q8IZ26 560 aa22.23■■□□□ 1.15
SQLE-205ENST00000521232 NYXQ9GZU5 481 aa22.23■■□□□ 1.15
SQLE-205ENST00000521232 ANP32CO43423 234 aa22.22■■□□□ 1.15
SQLE-205ENST00000521232 C21orf2O43822 256 aa22.22■■□□□ 1.15
SQLE-205ENST00000521232 ANXA1P04083 346 aa22.22■■□□□ 1.15
SQLE-205ENST00000521232 GTF2E1P29083 439 aaPredicted RBP22.22■■□□□ 1.15
SQLE-205ENST00000521232 RASSF7Q02833 373 aa22.22■■□□□ 1.15
SQLE-205ENST00000521232 NECTIN2Q92692 538 aa22.22■■□□□ 1.15
SQLE-205ENST00000521232 DDX21Q9NR30 783 aaKnown RBP eCLIP22.22■■□□□ 1.15
SQLE-205ENST00000521232 SLX4Q8IY92 1834 aa22.22■■□□□ 1.15
SQLE-205ENST00000521232 NFKBIEO00221 500 aa22.21■■□□□ 1.15
SQLE-205ENST00000521232 NPR1P16066 1061 aa22.21■■□□□ 1.15
SQLE-205ENST00000521232 LMNB1P20700 586 aa22.21■■□□□ 1.15
SQLE-205ENST00000521232 PRELPP51888 382 aa22.21■■□□□ 1.15
SQLE-205ENST00000521232 CALD1Q05682 793 aaKnown RBP22.21■■□□□ 1.15
SQLE-205ENST00000521232 MBIPQ9NS73 344 aa22.21■■□□□ 1.15
SQLE-205ENST00000521232 IFT57Q9NWB7 429 aa22.21■■□□□ 1.15
SQLE-205ENST00000521232 KIF3CO14782 793 aa22.2■■□□□ 1.14
SQLE-205ENST00000521232 GPTP24298 496 aa22.2■■□□□ 1.14
SQLE-205ENST00000521232 PRPF40BQ6NWY9 871 aaKnown RBP22.2■■□□□ 1.14
SQLE-205ENST00000521232 COPS6Q7L5N1 327 aa22.2■■□□□ 1.14
SQLE-205ENST00000521232 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.14
SQLE-205ENST00000521232 CCDC88AQ3V6T2 1871 aa22.2■■□□□ 1.14
SQLE-205ENST00000521232 GNAI1P63096 354 aa22.19■■□□□ 1.14
SQLE-205ENST00000521232 SUSD4Q5VX71 490 aa22.19■■□□□ 1.14
SQLE-205ENST00000521232 ZNF219Q9P2Y4 722 aaPredicted RBP22.19■■□□□ 1.14
SQLE-205ENST00000521232 IBTKQ9P2D0 1353 aaPredicted RBP22.19■■□□□ 1.14
SQLE-205ENST00000521232 ARFGEF2Q9Y6D5 1785 aa22.19■■□□□ 1.14
SQLE-205ENST00000521232 FER1L6Q2WGJ9 1857 aa22.18■■□□□ 1.14
SQLE-205ENST00000521232 ZC3H4Q9UPT8 1303 aaKnown RBP22.18■■□□□ 1.14
SQLE-205ENST00000521232 ERFEQ4G0M1 354 aa22.18■■□□□ 1.14
SQLE-205ENST00000521232 HDGFL1Q5TGJ6 251 aa22.18■■□□□ 1.14
SQLE-205ENST00000521232 DUSP27Q5VZP5 1158 aa22.18■■□□□ 1.14
SQLE-205ENST00000521232 NUTM1Q86Y26 1132 aa22.18■■□□□ 1.14
SQLE-205ENST00000521232 XAGE3Q8WTP9 111 aa22.18■■□□□ 1.14
SQLE-205ENST00000521232 C7orf43Q8WVR3 580 aa22.18■■□□□ 1.14
SQLE-205ENST00000521232 AIMP1Q12904 312 aaKnown RBP22.17■■□□□ 1.14
SQLE-205ENST00000521232 PARP10Q53GL7 1025 aa22.17■■□□□ 1.14
SQLE-205ENST00000521232 SOGA3Q5TF21 947 aa22.17■■□□□ 1.14
SQLE-205ENST00000521232 MRS2Q9HD23 443 aa22.17■■□□□ 1.14
SQLE-205ENST00000521232 CHPF2Q9P2E5 772 aa22.17■■□□□ 1.14
SQLE-205ENST00000521232 CACNA1SQ13698 1873 aa22.17■■□□□ 1.14
SQLE-205ENST00000521232 NTSR2O95665 410 aa22.16■■□□□ 1.14
SQLE-205ENST00000521232 ALDH1B1P30837 517 aa22.16■■□□□ 1.14
SQLE-205ENST00000521232 CRY2Q49AN0 593 aa22.16■■□□□ 1.14
SQLE-205ENST00000521232 PPP1R42Q7Z4L9 355 aa22.16■■□□□ 1.14
SQLE-205ENST00000521232 DBF4Q9UBU7 674 aaPredicted RBP22.16■■□□□ 1.14
SQLE-205ENST00000521232 ABCC12Q96J65 1359 aa22.15■■□□□ 1.14
SQLE-205ENST00000521232 LTBP3Q9NS15 1303 aa22.15■■□□□ 1.14
SQLE-205ENST00000521232 CCDC27Q2M243 656 aa22.15■■□□□ 1.14
SQLE-205ENST00000521232 HSP90AB3PQ58FF7 597 aa22.15■■□□□ 1.14
SQLE-205ENST00000521232 NMRK2Q9NPI5 230 aa22.15■■□□□ 1.14
SQLE-205ENST00000521232 RIC1Q4ADV7 1423 aa22.14■■□□□ 1.14
SQLE-205ENST00000521232 KDM2BQ8NHM5 1336 aa22.14■■□□□ 1.14
SQLE-205ENST00000521232 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
SQLE-205ENST00000521232 SENP3-EIF4A1A0A087X0R7 540 aa22.13■■□□□ 1.13
SQLE-205ENST00000521232 TCIRG1Q13488 830 aa22.13■■□□□ 1.13
SQLE-205ENST00000521232 SLC10A5Q5PT55 438 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms