RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.75■□□□□ 0.43
UBR5-207ENST00000520539 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 APBB1IPQ7Z5R6 666 aaPredicted RBP17.75■□□□□ 0.43
UBR5-207ENST00000520539 OGFRQ9NZT2 677 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 SATB2Q9UPW6 733 aa17.75■□□□□ 0.43
UBR5-207ENST00000520539 DHX29Q7Z478 1369 aaKnown RBP17.75■□□□□ 0.43
UBR5-207ENST00000520539 HDXQ7Z353 690 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 GABPB1Q06547 395 aaPredicted RBP17.74■□□□□ 0.43
UBR5-207ENST00000520539 STXBP4Q6ZWJ1 553 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 CHMP2AO43633 222 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
UBR5-207ENST00000520539 MRPS9P82933 396 aaKnown RBP17.74■□□□□ 0.43
UBR5-207ENST00000520539 HSP90AA5PQ58FG0 334 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 AKAP2Q9Y2D5 859 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 USP37Q86T82 979 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 PRKRIP1Q9H875 184 aaPredicted RBP17.74■□□□□ 0.43
UBR5-207ENST00000520539 SLC4A8Q2Y0W8 1093 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 INTS8Q75QN2 995 aaKnown RBP17.74■□□□□ 0.43
UBR5-207ENST00000520539 ANKRD24Q8TF21 1146 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 CALCOCO2Q13137 446 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 PDE3AQ14432 1141 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 ZHX3Q9H4I2 956 aa17.74■□□□□ 0.43
UBR5-207ENST00000520539 CTAGE15A4D2H0 777 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 CTAGE8P0CG41 777 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 CTAGE4Q8IX94 777 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 TSGA10Q9BZW7 698 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 PLIN1O60240 522 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 HAUS8Q9BT25 410 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 LARSQ9P2J5 1176 aaKnown RBP17.73■□□□□ 0.43
UBR5-207ENST00000520539 EID1Q9Y6B2 187 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 SEC63Q9UGP8 760 aaKnown RBP17.73■□□□□ 0.43
UBR5-207ENST00000520539 SNX16P57768 344 aa17.73■□□□□ 0.43
UBR5-207ENST00000520539 PPFIA1Q13136 1202 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 FAN1Q9Y2M0 1017 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 VAV2P52735 878 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 SMG6Q86US8 1419 aaKnown RBP17.72■□□□□ 0.43
UBR5-207ENST00000520539 NDC80O14777 642 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 CCDC65Q8IXS2 484 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 CLCN1P35523 988 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 PDCD2Q16342 344 aaPredicted RBP17.72■□□□□ 0.43
UBR5-207ENST00000520539 TRIM4Q9C037 500 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 SLC8A1P32418 973 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 STK26Q9P289 416 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 CARMIL2Q6F5E8 1435 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 SERPINA10Q9UK55 444 aa17.72■□□□□ 0.43
UBR5-207ENST00000520539 CCDC12Q8WUD4 166 aaPredicted RBP17.71■□□□□ 0.43
UBR5-207ENST00000520539 ZNF622Q969S3 477 aaKnown RBP eCLIP17.71■□□□□ 0.431e-7■■□□□ 12.6
UBR5-207ENST00000520539 HDAC9Q9UKV0 1011 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 CLUL1Q15846 466 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 STRN4Q9NRL3 753 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 SATB1Q01826 763 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 TBC1D5Q92609 795 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 RUFY3Q7L099 469 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 CEP85LQ5SZL2 805 aa17.71■□□□□ 0.43
UBR5-207ENST00000520539 CCDC170Q8IYT3 715 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 BANK1Q8NDB2 785 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 PRPF31Q8WWY3 499 aaKnown RBP17.7■□□□□ 0.42
UBR5-207ENST00000520539 ATP6V1AP38606 617 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 FERMT2Q96AC1 680 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 CEP104O60308 925 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 AMPD3Q01432 767 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 TUBB2AQ13885 445 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 TUBB2BQ9BVA1 445 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 NEUROD6Q96NK8 337 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 MTRF1LQ9UGC7 380 aaKnown RBP17.7■□□□□ 0.42
UBR5-207ENST00000520539 LRRC27Q9C0I9 530 aa17.7■□□□□ 0.42
UBR5-207ENST00000520539 BLOC1S2Q6QNY1 142 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 MCUR1Q96AQ8 359 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 AK9Q5TCS8 1911 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 ATP2B1P20020 1258 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 UBAC1Q9BSL1 405 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 NKIRAS1Q9NYS0 192 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 MPHOSPH9Q99550 1183 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 CETN3O15182 167 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 PDE1CQ14123 709 aaPredicted RBP17.69■□□□□ 0.42
UBR5-207ENST00000520539 ARMC9Q7Z3E5 817 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 SPAG5Q96R06 1193 aa17.69■□□□□ 0.42
UBR5-207ENST00000520539 RNF10Q8N5U6 811 aaKnown RBP17.69■□□□□ 0.42
UBR5-207ENST00000520539 GABPB2Q8TAK5 448 aaPredicted RBP17.69■□□□□ 0.42
UBR5-207ENST00000520539 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
UBR5-207ENST00000520539 GCKP35557 465 aa17.68■□□□□ 0.42
UBR5-207ENST00000520539 SMARCC2Q8TAQ2 1214 aa17.68■□□□□ 0.42
UBR5-207ENST00000520539 RRP7AQ9Y3A4 280 aaKnown RBP17.68■□□□□ 0.42
UBR5-207ENST00000520539 TDRD12Q587J7 1177 aaKnown RBP17.68■□□□□ 0.42
UBR5-207ENST00000520539 BACH2Q9BYV9 841 aa17.68■□□□□ 0.42
UBR5-207ENST00000520539 INPP5BP32019 993 aa17.68■□□□□ 0.42
UBR5-207ENST00000520539 NAA16Q6N069 864 aaPredicted RBP17.68■□□□□ 0.42
UBR5-207ENST00000520539 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
UBR5-207ENST00000520539 U3KPZ7 1027 aaPredicted RBP17.67■□□□□ 0.42
UBR5-207ENST00000520539 BICDL2A1A5D9 508 aa17.67■□□□□ 0.42
UBR5-207ENST00000520539 GPR161Q8N6U8 529 aaKnown RBP17.67■□□□□ 0.42
UBR5-207ENST00000520539 RMND1Q9NWS8 449 aa17.67■□□□□ 0.42
UBR5-207ENST00000520539 PFDN1O60925 122 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms