RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 U2SURPO15042 1029 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 DIAPH1O60610 1272 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 TMPOP42166 694 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 NKX1-1Q15270 411 aaPredicted RBP10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 ATF7IPQ6VMQ6 1270 aa10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 HSCBQ8IWL3 235 aa10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 ATG3Q9NT62 314 aa10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 PCDHB15Q9Y5E8 787 aa10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 ADCY9O60503 1353 aa10.77□□□□□ -0.69
CTNNA1-223ENST00000520520 CICQ96RK0 1608 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 A0A0G2JLW4 131 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 HSPA6P17066 643 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 LMOD3Q0VAK6 560 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 EIF4A2Q14240 407 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 TRAPPC3LQ5T215 181 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 ARHGAP27Q6ZUM4 889 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 ITPRIPQ8IWB1 547 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 FAM43AQ8N2R8 423 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 IL27Q8NEV9 243 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 POLKQ9UBT6 870 aa10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 ISY1Q9ULR0 285 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 RTCBQ9Y3I0 505 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-223ENST00000520520 DDX11L8A8MPP1 907 aa10.75□□□□□ -0.69
CTNNA1-223ENST00000520520 RLBP1P12271 317 aa10.75□□□□□ -0.69
CTNNA1-223ENST00000520520 BCL2L13Q9BXK5 485 aa10.75□□□□□ -0.69
CTNNA1-223ENST00000520520 C22orf23Q9BZE7 217 aa10.75□□□□□ -0.69
CTNNA1-223ENST00000520520 PTCD1O75127 700 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 FCHSD2O94868 740 aa10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 RFC4P35249 363 aa10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 CABP4P57796 275 aa10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 EXOSC9Q06265 439 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 ZNF530Q6P9A1 599 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 SMC5Q8IY18 1101 aa10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 PLEKHF1Q96S99 279 aa10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 NCAPD2Q15021 1401 aa10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 PXDNLA1KZ92 1463 aa10.74□□□□□ -0.69
CTNNA1-223ENST00000520520 KIF3CO14782 793 aa10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 TRIM27P14373 513 aa10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 DPEP1P16444 411 aa10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 BRPF1P55201 1214 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 ARHGEF1Q92888 912 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 SLKQ9H2G2 1235 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 PARP3Q9Y6F1 533 aa10.73□□□□□ -0.69
CTNNA1-223ENST00000520520 RIPK4P57078 832 aa10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 SSH1Q8WYL5 1049 aa10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 GCC1Q96CN9 775 aa10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 TBC1D2Q9BYX2 928 aa10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 ANTXR1Q9H6X2 564 aa10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 CCDC87Q9NVE4 849 aa10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.72□□□□□ -0.691e-12■■□□□ 12.3
CTNNA1-223ENST00000520520 SRP68Q9UHB9 627 aaKnown RBP10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 BRPF3Q9ULD4 1205 aa10.72□□□□□ -0.69
CTNNA1-223ENST00000520520 SEC24BO95487 1268 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 GYS1P13807 737 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 KDRP35968 1356 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 C1orf141Q5JVX7 400 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 AEBP1Q8IUX7 1158 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 NLGN1Q8N2Q7 840 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 ARHGAP45Q92619 1136 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 NMRK2Q9NPI5 230 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.69
CTNNA1-223ENST00000520520 C4AP0C0L4 1744 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 KIAA1551Q9HCM1 1747 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 KDM6AO15550 1401 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 C10orf71Q711Q0 1435 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 ERVV-2B6SEH9 535 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 HSP90AB1P08238 724 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 MFAP1P55081 439 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 TGFB2P61812 414 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 GNAI1P63096 354 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 SNX21Q969T3 373 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 DCAF5Q96JK2 942 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 GBP4Q96PP9 640 aa10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 COL5A3P25940 1745 aaPredicted RBP10.7□□□□□ -0.7
CTNNA1-223ENST00000520520 RPS6KA4O75676 772 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 CRKLP46109 303 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 RBM25P49756 843 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 HTRA3P83110 453 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 NUCB1Q02818 461 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 NFE2L2Q16236 605 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 C9orf131Q5VYM1 1079 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 C16orf71Q8IYS4 520 aaPredicted RBP10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 NFATC2IPQ8NCF5 419 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 API5Q9BZZ5 524 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 RSPH6AQ9H0K4 717 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 ZBTB40Q9NUA8 1239 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 NOB1Q9ULX3 412 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 KIF13BQ9NQT8 1826 aa10.69□□□□□ -0.7
CTNNA1-223ENST00000520520 CNTNAP4Q9C0A0 1308 aa10.68□□□□□ -0.7
CTNNA1-223ENST00000520520 CHRNA5P30532 468 aa10.68□□□□□ -0.7
CTNNA1-223ENST00000520520 MCM4P33991 863 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms