RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
SPIDR-212ENST00000519661 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
SPIDR-212ENST00000519661 KLRG2A4D1S0 409 aaPredicted RBP14.93□□□□□ -0.02
SPIDR-212ENST00000519661 PIP4K2AP48426 406 aaPredicted RBP14.93□□□□□ -0.02
SPIDR-212ENST00000519661 TTLL7Q6ZT98 887 aa14.93□□□□□ -0.02
SPIDR-212ENST00000519661 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
SPIDR-212ENST00000519661 NLGN2Q8NFZ4 835 aa14.93□□□□□ -0.02
SPIDR-212ENST00000519661 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
SPIDR-212ENST00000519661 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
SPIDR-212ENST00000519661 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
SPIDR-212ENST00000519661 RNF123Q5XPI4 1314 aa14.92□□□□□ -0.02
SPIDR-212ENST00000519661 SERPINB2P05120 415 aa14.92□□□□□ -0.02
SPIDR-212ENST00000519661 ZNF34Q8IZ26 560 aa14.92□□□□□ -0.02
SPIDR-212ENST00000519661 TSPYL6Q8N831 410 aa14.92□□□□□ -0.02
SPIDR-212ENST00000519661 TSR2Q969E8 191 aaKnown RBP14.92□□□□□ -0.02
SPIDR-212ENST00000519661 CHPF2Q9P2E5 772 aa14.92□□□□□ -0.02
SPIDR-212ENST00000519661 AFDNP55196 1824 aaKnown RBP14.92□□□□□ -0.02
SPIDR-212ENST00000519661 EIF2S2P20042 333 aaKnown RBP14.91□□□□□ -0.02
SPIDR-212ENST00000519661 KCNA3P22001 575 aa14.91□□□□□ -0.02
SPIDR-212ENST00000519661 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
SPIDR-212ENST00000519661 TRIM28Q13263 835 aaKnown RBP14.91□□□□□ -0.02
SPIDR-212ENST00000519661 HLFQ16534 295 aa14.91□□□□□ -0.02
SPIDR-212ENST00000519661 KIF6Q6ZMV9 814 aa14.91□□□□□ -0.02
SPIDR-212ENST00000519661 SETDB2Q96T68 719 aa14.91□□□□□ -0.02
SPIDR-212ENST00000519661 E9PSI1 815 aa14.9□□□□□ -0.02
SPIDR-212ENST00000519661 VAMP4O75379 141 aa14.9□□□□□ -0.02
SPIDR-212ENST00000519661 TWISTNBQ3B726 338 aaPredicted RBP14.9□□□□□ -0.02
SPIDR-212ENST00000519661 CCDC30Q5VVM6 783 aa14.9□□□□□ -0.02
SPIDR-212ENST00000519661 PRR5LQ6MZQ0 368 aa14.9□□□□□ -0.02
SPIDR-212ENST00000519661 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
SPIDR-212ENST00000519661 BRCA1P38398 1863 aaKnown RBP14.9□□□□□ -0.02
SPIDR-212ENST00000519661 MYL6BP14649 208 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 PARP10Q53GL7 1025 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 HSP90AB3PQ58FF7 597 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 COPS6Q7L5N1 327 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 PLBD2Q8NHP8 589 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 XAGE3Q8WTP9 111 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
SPIDR-212ENST00000519661 UBN2Q6ZU65 1347 aa14.89□□□□□ -0.03
SPIDR-212ENST00000519661 DLEC1Q9Y238 1755 aa14.88□□□□□ -0.03
SPIDR-212ENST00000519661 NUP98P52948 1817 aa14.88□□□□□ -0.03
SPIDR-212ENST00000519661 ANXA1P04083 346 aa14.87□□□□□ -0.03
SPIDR-212ENST00000519661 TCIRG1Q13488 830 aa14.87□□□□□ -0.03
SPIDR-212ENST00000519661 CNBD1Q8NA66 436 aa14.87□□□□□ -0.03
SPIDR-212ENST00000519661 NIP7Q9Y221 180 aaKnown RBP eCLIP14.87□□□□□ -0.03
SPIDR-212ENST00000519661 ANKRD31Q8N7Z5 1873 aa14.86□□□□□ -0.03
SPIDR-212ENST00000519661 CT47B1P0C2W7 299 aaPredicted RBP14.86□□□□□ -0.03
SPIDR-212ENST00000519661 EXOSC9Q06265 439 aaKnown RBP14.86□□□□□ -0.03
SPIDR-212ENST00000519661 CRY2Q49AN0 593 aa14.86□□□□□ -0.03
SPIDR-212ENST00000519661 SLC10A5Q5PT55 438 aa14.86□□□□□ -0.03
SPIDR-212ENST00000519661 TPTE2Q6XPS3 522 aa14.86□□□□□ -0.03
SPIDR-212ENST00000519661 ANKRD13DQ6ZTN6 518 aa14.86□□□□□ -0.03
SPIDR-212ENST00000519661 ISCA1Q9BUE6 129 aa14.86□□□□□ -0.03
SPIDR-212ENST00000519661 NYXQ9GZU5 481 aa14.86□□□□□ -0.03
SPIDR-212ENST00000519661 ANKRD36CQ5JPF3 1778 aa14.85□□□□□ -0.03
SPIDR-212ENST00000519661 GRIN3BO60391 1043 aa14.85□□□□□ -0.03
SPIDR-212ENST00000519661 NTSR2O95665 410 aa14.85□□□□□ -0.03
SPIDR-212ENST00000519661 DPEP1P16444 411 aa14.85□□□□□ -0.03
SPIDR-212ENST00000519661 YBX3P16989 372 aaKnown RBP eCLIP14.85□□□□□ -0.03
SPIDR-212ENST00000519661 PDE6BP35913 854 aa14.85□□□□□ -0.03
SPIDR-212ENST00000519661 ZBTB3Q9H5J0 574 aa14.85□□□□□ -0.03
SPIDR-212ENST00000519661 CACNA1FO60840 1977 aa14.85□□□□□ -0.03
SPIDR-212ENST00000519661 ELL2O00472 640 aaPredicted RBP14.84□□□□□ -0.03
SPIDR-212ENST00000519661 NLRP10Q86W26 655 aa14.84□□□□□ -0.03
SPIDR-212ENST00000519661 NBPF5PQ86XG9 351 aaPredicted RBP14.84□□□□□ -0.03
SPIDR-212ENST00000519661 SRGNP10124 158 aa14.83□□□□□ -0.04
SPIDR-212ENST00000519661 ST5P78524 1137 aa14.83□□□□□ -0.04
SPIDR-212ENST00000519661 BICDL1Q6ZP65 573 aa14.83□□□□□ -0.04
SPIDR-212ENST00000519661 NECTIN2Q92692 538 aa14.83□□□□□ -0.04
SPIDR-212ENST00000519661 STK31Q9BXU1 1019 aa14.83□□□□□ -0.04
SPIDR-212ENST00000519661 PHAXQ9H814 394 aaKnown RBP14.83□□□□□ -0.04
SPIDR-212ENST00000519661 PIM2Q9P1W9 311 aa14.83□□□□□ -0.04
SPIDR-212ENST00000519661 SALL2Q9Y467 1007 aaPredicted RBP14.83□□□□□ -0.04
SPIDR-212ENST00000519661 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 A0A0G2JLW4 131 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
SPIDR-212ENST00000519661 BRPF1P55201 1214 aaPredicted RBP14.82□□□□□ -0.04
SPIDR-212ENST00000519661 SUSD4Q5VX71 490 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 STYK1Q6J9G0 422 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 KSR2Q6VAB6 950 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 PPP1R42Q7Z4L9 355 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 COL11A2P13942 1736 aaPredicted RBP14.82□□□□□ -0.04
SPIDR-212ENST00000519661 ARFGEF2Q9Y6D5 1785 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 ADCY9O60503 1353 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 ABCC12Q96J65 1359 aa14.82□□□□□ -0.04
SPIDR-212ENST00000519661 N4BP2Q86UW6 1770 aaPredicted RBP14.81□□□□□ -0.04
SPIDR-212ENST00000519661 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
SPIDR-212ENST00000519661 DDX58O95786 925 aaKnown RBP14.81□□□□□ -0.04
SPIDR-212ENST00000519661 METTL22Q9BUU2 404 aaPredicted RBP14.81□□□□□ -0.04
SPIDR-212ENST00000519661 H0YIN7 160 aa14.8□□□□□ -0.04
SPIDR-212ENST00000519661 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
SPIDR-212ENST00000519661 FLIIQ13045 1269 aa14.8□□□□□ -0.04
SPIDR-212ENST00000519661 KLHL34Q8N239 644 aa14.8□□□□□ -0.04
SPIDR-212ENST00000519661 CCDC191Q8NCU4 936 aa14.8□□□□□ -0.04
SPIDR-212ENST00000519661 ZBED9Q6R2W3 1325 aa14.8□□□□□ -0.04
SPIDR-212ENST00000519661 CHRNA5P30532 468 aa14.79□□□□□ -0.04
SPIDR-212ENST00000519661 AIMP1Q12904 312 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms