RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 CICQ96RK0 1608 aaPredicted RBP10.08□□□□□ -0.8
CLK4-203ENST00000519583 CASZ1Q86V15 1759 aa10.08□□□□□ -0.8
CLK4-203ENST00000519583 SLC16A10Q8TF71 515 aa10.08□□□□□ -0.8
CLK4-203ENST00000519583 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
CLK4-203ENST00000519583 RFC4P35249 363 aa10.07□□□□□ -0.8
CLK4-203ENST00000519583 PIP4K2AP48426 406 aaPredicted RBP10.07□□□□□ -0.8
CLK4-203ENST00000519583 RGS3P49796 1198 aa10.07□□□□□ -0.8
CLK4-203ENST00000519583 MSL1Q68DK7 614 aa10.07□□□□□ -0.8
CLK4-203ENST00000519583 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
CLK4-203ENST00000519583 ADRA2BP18089 450 aa10.07□□□□□ -0.8
CLK4-203ENST00000519583 SOS1Q07889 1333 aaPredicted RBP10.07□□□□□ -0.8
CLK4-203ENST00000519583 PDE4AP27815 886 aa10.06□□□□□ -0.8
CLK4-203ENST00000519583 NPM2Q86SE8 214 aaKnown RBP10.06□□□□□ -0.8
CLK4-203ENST00000519583 ARHGAP45Q92619 1136 aa10.06□□□□□ -0.8
CLK4-203ENST00000519583 EIF2S2P20042 333 aaKnown RBP10.06□□□□□ -0.8
CLK4-203ENST00000519583 ARXQ96QS3 562 aa10.06□□□□□ -0.8
CLK4-203ENST00000519583 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
CLK4-203ENST00000519583 RWDD1Q9H446 243 aaPredicted RBP10.05□□□□□ -0.8
CLK4-203ENST00000519583 COL15A1P39059 1388 aa10.05□□□□□ -0.8
CLK4-203ENST00000519583 ZBTB40Q9NUA8 1239 aa10.05□□□□□ -0.8
CLK4-203ENST00000519583 SRP68Q9UHB9 627 aaKnown RBP10.05□□□□□ -0.8
CLK4-203ENST00000519583 BACH2Q9BYV9 841 aa10.05□□□□□ -0.8
CLK4-203ENST00000519583 PPP1R1BQ9UD71 204 aaPredicted RBP10.05□□□□□ -0.8
CLK4-203ENST00000519583 ABCC4O15439 1325 aa10.04□□□□□ -0.8
CLK4-203ENST00000519583 ZPR1O75312 459 aa10.04□□□□□ -0.8
CLK4-203ENST00000519583 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
CLK4-203ENST00000519583 EIF5P55010 431 aaKnown RBP10.04□□□□□ -0.8
CLK4-203ENST00000519583 API5Q9BZZ5 524 aaKnown RBP10.04□□□□□ -0.8
CLK4-203ENST00000519583 NBPF26B4DH59 902 aa10.04□□□□□ -0.8
CLK4-203ENST00000519583 POLD1P28340 1107 aa10.04□□□□□ -0.8
CLK4-203ENST00000519583 NBPF10Q6P3W6 841 aaKnown RBP10.04□□□□□ -0.8
CLK4-203ENST00000519583 NBPF15Q8N660 670 aa10.04□□□□□ -0.8
CLK4-203ENST00000519583 A0A087WZG4 1122 aa10.03□□□□□ -0.8
CLK4-203ENST00000519583 PTGER2P43116 358 aa10.03□□□□□ -0.8
CLK4-203ENST00000519583 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
CLK4-203ENST00000519583 MYL6BP14649 208 aa10.03□□□□□ -0.8
CLK4-203ENST00000519583 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
CLK4-203ENST00000519583 USP42Q9H9J4 1324 aaKnown RBP10.03□□□□□ -0.8
CLK4-203ENST00000519583 GYS1P13807 737 aa10.03□□□□□ -0.8
CLK4-203ENST00000519583 LAMB4A4D0S4 1761 aa10.03□□□□□ -0.8
CLK4-203ENST00000519583 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.8
CLK4-203ENST00000519583 NARFQ9UHQ1 456 aa10.02□□□□□ -0.8
CLK4-203ENST00000519583 SGIP1Q9BQI5 828 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 PDZRN3Q9UPQ7 1066 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 SRCAPQ6ZRS2 3230 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 ZBTB7BO15156 539 aaPredicted RBP10.02□□□□□ -0.81
CLK4-203ENST00000519583 ANXA1P04083 346 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 HOXB7P09629 217 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 HDAC1Q13547 482 aaPredicted RBP10.02□□□□□ -0.81
CLK4-203ENST00000519583 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
CLK4-203ENST00000519583 NLGN1Q8N2Q7 840 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 LRP5O75197 1615 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 C4AP0C0L4 1744 aa10.02□□□□□ -0.81
CLK4-203ENST00000519583 SLC4A2P04920 1241 aa10.01□□□□□ -0.81
CLK4-203ENST00000519583 ERBB4Q15303 1308 aa10.01□□□□□ -0.81
CLK4-203ENST00000519583 KLHL34Q8N239 644 aa10.01□□□□□ -0.81
CLK4-203ENST00000519583 C1orf115Q9H7X2 142 aa10.01□□□□□ -0.81
CLK4-203ENST00000519583 MMP10P09238 476 aa10.01□□□□□ -0.81
CLK4-203ENST00000519583 PROSER3Q2NL68 480 aa10.01□□□□□ -0.81
CLK4-203ENST00000519583 CHPF2Q9P2E5 772 aa10□□□□□ -0.81
CLK4-203ENST00000519583 PDIA6Q15084 440 aa10□□□□□ -0.81
CLK4-203ENST00000519583 FAM161AQ3B820 660 aa10□□□□□ -0.81
CLK4-203ENST00000519583 G2E3Q7L622 706 aa10□□□□□ -0.81
CLK4-203ENST00000519583 CHMP4BQ9H444 224 aaKnown RBP10□□□□□ -0.81
CLK4-203ENST00000519583 PTPRCP08575 1304 aa10□□□□□ -0.81
CLK4-203ENST00000519583 CAMTA2O94983 1202 aa9.99□□□□□ -0.81
CLK4-203ENST00000519583 BICDL1Q6ZP65 573 aa9.99□□□□□ -0.81
CLK4-203ENST00000519583 BCL2L12Q9HB09 334 aa9.99□□□□□ -0.81
CLK4-203ENST00000519583 DDX21Q9NR30 783 aaKnown RBP eCLIP9.99□□□□□ -0.81
CLK4-203ENST00000519583 C8orf34Q49A92 452 aa9.99□□□□□ -0.81
CLK4-203ENST00000519583 KIF6Q6ZMV9 814 aa9.99□□□□□ -0.81
CLK4-203ENST00000519583 TTLL7Q6ZT98 887 aa9.99□□□□□ -0.81
CLK4-203ENST00000519583 ANP32AP39687 249 aaKnown RBP9.99□□□□□ -0.81
CLK4-203ENST00000519583 AIMP1Q12904 312 aaKnown RBP9.99□□□□□ -0.81
CLK4-203ENST00000519583 INTS3Q68E01 1043 aaKnown RBP9.99□□□□□ -0.81
CLK4-203ENST00000519583 STK31Q9BXU1 1019 aa9.99□□□□□ -0.81
CLK4-203ENST00000519583 DBF4Q9UBU7 674 aaPredicted RBP9.98□□□□□ -0.81
CLK4-203ENST00000519583 PARP3Q9Y6F1 533 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 CCDC30Q5VVM6 783 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 NFIXQ14938 502 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 COPS6Q7L5N1 327 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 XAGE3Q8WTP9 111 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 CHMP4AQ9BY43 222 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 FHDC1Q9C0D6 1143 aaPredicted RBP9.98□□□□□ -0.81
CLK4-203ENST00000519583 ZBTB3Q9H5J0 574 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 ZNF652Q9Y2D9 606 aa9.98□□□□□ -0.81
CLK4-203ENST00000519583 DDR1Q08345 913 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 TBC1D9BQ66K14 1250 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 LRP10Q7Z4F1 713 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 COL24A1Q17RW2 1714 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 F6X3S4 739 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 TM4SF1P30408 202 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 HLFQ16534 295 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 MAP3K15Q6ZN16 1313 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 HYPKQ9NX55 129 aa9.97□□□□□ -0.81
CLK4-203ENST00000519583 SCN7AQ01118 1682 aa9.96□□□□□ -0.82
CLK4-203ENST00000519583 POLRMTO00411 1230 aaKnown RBP9.96□□□□□ -0.82
CLK4-203ENST00000519583 FLIIQ13045 1269 aa9.96□□□□□ -0.82
CLK4-203ENST00000519583 SLC4A10Q6U841 1118 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms