RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ARFGEF2Q9Y6D5 1785 aa22.79■■□□□ 1.24
FAM49B-214ENST00000519540 HSP90AB4PQ58FF6 505 aa22.78■■□□□ 1.24
FAM49B-214ENST00000519540 RHPN1Q8TCX5 695 aa22.78■■□□□ 1.24
FAM49B-214ENST00000519540 CDCA7Q9BWT1 371 aaPredicted RBP22.78■■□□□ 1.24
FAM49B-214ENST00000519540 THRAP3Q9Y2W1 955 aaKnown RBP22.78■■□□□ 1.24
FAM49B-214ENST00000519540 MX1P20591 662 aa22.77■■□□□ 1.24
FAM49B-214ENST00000519540 ATG3Q9NT62 314 aa22.77■■□□□ 1.24
FAM49B-214ENST00000519540 STAP2Q9UGK3 403 aa22.77■■□□□ 1.24
FAM49B-214ENST00000519540 LRP6O75581 1613 aa22.77■■□□□ 1.24
FAM49B-214ENST00000519540 RBM25P49756 843 aaKnown RBP22.77■■□□□ 1.24
FAM49B-214ENST00000519540 KIF1BPQ96EK5 621 aa22.77■■□□□ 1.24
FAM49B-214ENST00000519540 IL1RAPL2Q9NP60 686 aa22.77■■□□□ 1.24
FAM49B-214ENST00000519540 VSIG10Q8N0Z9 540 aa22.76■■□□□ 1.23
FAM49B-214ENST00000519540 BICC1Q9H694 974 aaKnown RBP22.76■■□□□ 1.23
FAM49B-214ENST00000519540 UBAP1LF5GYI3 381 aa22.75■■□□□ 1.23
FAM49B-214ENST00000519540 BCL9O00512 1426 aa22.75■■□□□ 1.23
FAM49B-214ENST00000519540 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
FAM49B-214ENST00000519540 BECN1Q14457 450 aa22.74■■□□□ 1.23
FAM49B-214ENST00000519540 TTLL7Q6ZT98 887 aa22.74■■□□□ 1.23
FAM49B-214ENST00000519540 EIF5BO60841 1220 aaKnown RBP22.74■■□□□ 1.23
FAM49B-214ENST00000519540 AFDNP55196 1824 aaKnown RBP22.73■■□□□ 1.23
FAM49B-214ENST00000519540 SLIT2O94813 1529 aa22.73■■□□□ 1.23
FAM49B-214ENST00000519540 ATP5J2-PTCD1G3V325 749 aa22.73■■□□□ 1.23
FAM49B-214ENST00000519540 TSHZ3Q63HK5 1081 aa22.73■■□□□ 1.23
FAM49B-214ENST00000519540 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
FAM49B-214ENST00000519540 SPATA31A5Q5VU36 1347 aa22.73■■□□□ 1.23
FAM49B-214ENST00000519540 SPATA31A7Q8IWB4 1347 aa22.73■■□□□ 1.23
FAM49B-214ENST00000519540 AOX1Q06278 1338 aa22.72■■□□□ 1.23
FAM49B-214ENST00000519540 DNAJC10Q8IXB1 793 aa22.72■■□□□ 1.23
FAM49B-214ENST00000519540 TUBGCP6Q96RT7 1819 aa22.72■■□□□ 1.23
FAM49B-214ENST00000519540 DDB1Q16531 1140 aa22.71■■□□□ 1.23
FAM49B-214ENST00000519540 NUTM1Q86Y26 1132 aa22.71■■□□□ 1.23
FAM49B-214ENST00000519540 RBM42Q9BTD8 480 aaKnown RBP22.71■■□□□ 1.23
FAM49B-214ENST00000519540 PA2G4Q9UQ80 394 aaKnown RBP22.71■■□□□ 1.23
FAM49B-214ENST00000519540 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
FAM49B-214ENST00000519540 OS9Q13438 667 aaPredicted RBP22.7■■□□□ 1.23
FAM49B-214ENST00000519540 EPHA10Q5JZY3 1008 aa22.7■■□□□ 1.23
FAM49B-214ENST00000519540 CASC1Q6TDU7 716 aa22.7■■□□□ 1.23
FAM49B-214ENST00000519540 COL15A1P39059 1388 aa22.7■■□□□ 1.22
FAM49B-214ENST00000519540 A0A087WZG4 1122 aa22.69■■□□□ 1.22
FAM49B-214ENST00000519540 ERC1Q8IUD2 1116 aa22.69■■□□□ 1.22
FAM49B-214ENST00000519540 PRIM1P49642 420 aaKnown RBP22.69■■□□□ 1.22
FAM49B-214ENST00000519540 UBE3BQ7Z3V4 1068 aa22.69■■□□□ 1.22
FAM49B-214ENST00000519540 JARID2Q92833 1246 aaPredicted RBP22.69■■□□□ 1.22
FAM49B-214ENST00000519540 SYTL4Q96C24 671 aaPredicted RBP22.69■■□□□ 1.22
FAM49B-214ENST00000519540 STARD3NLO95772 234 aa22.68■■□□□ 1.22
FAM49B-214ENST00000519540 CASP7P55210 303 aa22.68■■□□□ 1.22
FAM49B-214ENST00000519540 BARGINQ6ZT62 677 aa22.68■■□□□ 1.22
FAM49B-214ENST00000519540 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
FAM49B-214ENST00000519540 ZBTB3Q9H5J0 574 aa22.68■■□□□ 1.22
FAM49B-214ENST00000519540 KAT6BQ8WYB5 2073 aa22.68■■□□□ 1.22
FAM49B-214ENST00000519540 H7C1W4 665 aa22.67■■□□□ 1.22
FAM49B-214ENST00000519540 SLC4A9Q96Q91 983 aa22.67■■□□□ 1.22
FAM49B-214ENST00000519540 CCDC9Q9Y3X0 531 aaKnown RBP22.67■■□□□ 1.22
FAM49B-214ENST00000519540 DOT1LQ8TEK3 1739 aa22.66■■□□□ 1.22
FAM49B-214ENST00000519540 RABL6Q3YEC7 729 aaPredicted RBP22.66■■□□□ 1.22
FAM49B-214ENST00000519540 CLASRPQ8N2M8 674 aaKnown RBP22.66■■□□□ 1.22
FAM49B-214ENST00000519540 G3BP1Q13283 466 aaKnown RBP eCLIP22.65■■□□□ 1.22
FAM49B-214ENST00000519540 MARCH10Q8NA82 808 aaPredicted RBP22.65■■□□□ 1.22
FAM49B-214ENST00000519540 CWC25Q9NXE8 425 aaPredicted RBP22.65■■□□□ 1.22
FAM49B-214ENST00000519540 UNC5CLQ8IV45 518 aa22.65■■□□□ 1.22
FAM49B-214ENST00000519540 PI4K2BQ8TCG2 481 aa22.65■■□□□ 1.22
FAM49B-214ENST00000519540 KIF2CQ99661 725 aa22.65■■□□□ 1.22
FAM49B-214ENST00000519540 JCADQ9P266 1359 aa22.65■■□□□ 1.22
FAM49B-214ENST00000519540 TRIM6-TRIM34B2RNG4 842 aa22.64■■□□□ 1.22
FAM49B-214ENST00000519540 SASH1O94885 1247 aa22.64■■□□□ 1.22
FAM49B-214ENST00000519540 CCDC191Q8NCU4 936 aa22.64■■□□□ 1.22
FAM49B-214ENST00000519540 USP26Q9BXU7 913 aa22.64■■□□□ 1.22
FAM49B-214ENST00000519540 USP42Q9H9J4 1324 aaKnown RBP22.64■■□□□ 1.22
FAM49B-214ENST00000519540 CYP19A1P11511 503 aaPredicted RBP22.64■■□□□ 1.21
FAM49B-214ENST00000519540 RILPL2Q969X0 211 aa22.64■■□□□ 1.21
FAM49B-214ENST00000519540 TTC41PQ6P2S7 1318 aa22.62■■□□□ 1.21
FAM49B-214ENST00000519540 RFX5P48382 616 aaPredicted RBP22.62■■□□□ 1.21
FAM49B-214ENST00000519540 COPRSQ9NQ92 184 aa22.62■■□□□ 1.21
FAM49B-214ENST00000519540 ZNF330Q9Y3S2 320 aaPredicted RBP22.62■■□□□ 1.21
FAM49B-214ENST00000519540 ERC2O15083 957 aa22.62■■□□□ 1.21
FAM49B-214ENST00000519540 KLHDC4Q8TBB5 520 aa22.62■■□□□ 1.21
FAM49B-214ENST00000519540 REC8O95072 547 aa22.61■■□□□ 1.21
FAM49B-214ENST00000519540 TCIRG1Q13488 830 aa22.61■■□□□ 1.21
FAM49B-214ENST00000519540 NGLY1Q96IV0 654 aa22.61■■□□□ 1.21
FAM49B-214ENST00000519540 ISCA1Q9BUE6 129 aa22.61■■□□□ 1.21
FAM49B-214ENST00000519540 SIL1Q9H173 461 aa22.61■■□□□ 1.21
FAM49B-214ENST00000519540 TJP1Q07157 1748 aa22.61■■□□□ 1.21
FAM49B-214ENST00000519540 CHMLP26374 656 aa22.6■■□□□ 1.21
FAM49B-214ENST00000519540 FOXO4P98177 505 aa22.6■■□□□ 1.21
FAM49B-214ENST00000519540 KIF6Q6ZMV9 814 aa22.6■■□□□ 1.21
FAM49B-214ENST00000519540 C8orf37Q96NL8 207 aa22.6■■□□□ 1.21
FAM49B-214ENST00000519540 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.6■■□□□ 1.21
FAM49B-214ENST00000519540 BCL9LQ86UU0 1499 aa22.6■■□□□ 1.21
FAM49B-214ENST00000519540 PTPN12Q05209 780 aaKnown RBP22.6■■□□□ 1.21
FAM49B-214ENST00000519540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.6■■□□□ 1.21
FAM49B-214ENST00000519540 IFIT2P09913 472 aaKnown RBP22.59■■□□□ 1.21
FAM49B-214ENST00000519540 TRIM28Q13263 835 aaKnown RBP22.58■■□□□ 1.21
FAM49B-214ENST00000519540 VPS72Q15906 364 aa22.58■■□□□ 1.21
FAM49B-214ENST00000519540 LMBR1LQ6UX01 489 aa22.58■■□□□ 1.21
FAM49B-214ENST00000519540 AACSQ86V21 672 aa22.58■■□□□ 1.21
FAM49B-214ENST00000519540 SNX21Q969T3 373 aa22.58■■□□□ 1.21
FAM49B-214ENST00000519540 ACSBG1Q96GR2 724 aa22.58■■□□□ 1.21
FAM49B-214ENST00000519540 ESYT1Q9BSJ8 1104 aa22.58■■□□□ 1.21
FAM49B-214ENST00000519540 ECHDC1Q9NTX5 307 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms