RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 F13A1P00488 732 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 VSIG10Q8N0Z9 540 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 USP25Q9UHP3 1055 aa19.91■□□□□ 0.78
PCDHGA11-202ENST00000518882 SMC3Q9UQE7 1217 aa19.91■□□□□ 0.78
PCDHGA11-202ENST00000518882 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.91■□□□□ 0.78
PCDHGA11-202ENST00000518882 TTC41PQ6P2S7 1318 aa19.91■□□□□ 0.78
PCDHGA11-202ENST00000518882 GLRX3O76003 335 aaKnown RBP19.91■□□□□ 0.78
PCDHGA11-202ENST00000518882 OS9Q13438 667 aaPredicted RBP19.91■□□□□ 0.78
PCDHGA11-202ENST00000518882 FIBPO43427 364 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 HOXB7P09629 217 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 UBE2HP62256 183 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 HSP90AB4PQ58FF6 505 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 CCDC83Q8IWF9 413 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 FAM184AQ8NB25 1140 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 LMO7Q8WWI1 1683 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 HCLS1P14317 486 aaPredicted RBP19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 DIAPH3Q9NSV4 1193 aa19.9■□□□□ 0.78
PCDHGA11-202ENST00000518882 IP6K1Q92551 441 aa19.89■□□□□ 0.77
PCDHGA11-202ENST00000518882 FAM13BQ9NYF5 915 aa19.89■□□□□ 0.77
PCDHGA11-202ENST00000518882 PA2G4Q9UQ80 394 aaKnown RBP19.89■□□□□ 0.77
PCDHGA11-202ENST00000518882 NFAT5O94916 1531 aa19.89■□□□□ 0.77
PCDHGA11-202ENST00000518882 ST3GAL1Q11201 340 aa19.88■□□□□ 0.77
PCDHGA11-202ENST00000518882 MTX1Q13505 466 aa19.88■□□□□ 0.77
PCDHGA11-202ENST00000518882 UVSSAQ2YD98 709 aa19.88■□□□□ 0.77
PCDHGA11-202ENST00000518882 PRPF40BQ6NWY9 871 aaKnown RBP19.88■□□□□ 0.77
PCDHGA11-202ENST00000518882 JAKMIP1Q96N16 626 aaKnown RBP19.88■□□□□ 0.77
PCDHGA11-202ENST00000518882 ZNF830Q96NB3 372 aaPredicted RBP19.88■□□□□ 0.77
PCDHGA11-202ENST00000518882 GJB2P29033 226 aa19.88■□□□□ 0.77
PCDHGA11-202ENST00000518882 BTBD11A6QL63 1104 aa19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 KIAA2012Q0VF49 1180 aa19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 CLASRPQ8N2M8 674 aaKnown RBP19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 DNM1Q05193 864 aaKnown RBP19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 PROSER3Q2NL68 480 aa19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 MPRIPQ6WCQ1 1025 aa19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 ECHDC1Q9NTX5 307 aa19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 PDRG1Q9NUG6 133 aa19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 MTMR6Q9Y217 621 aa19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.87■□□□□ 0.77
PCDHGA11-202ENST00000518882 ADCY5O95622 1261 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 COL9A3Q14050 684 aaPredicted RBP19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 VPS53Q5VIR6 699 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 SASS6Q6UVJ0 657 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 LRRC59Q96AG4 307 aaKnown RBP19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 ZSWIM6Q9HCJ5 1215 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 MAP3K2Q9Y2U5 619 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 ZBTB7CA1YPR0 619 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 TEFQ10587 303 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 RUFY2Q8WXA3 655 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 FUCA2Q9BTY2 467 aa19.86■□□□□ 0.77
PCDHGA11-202ENST00000518882 CWF19L2Q2TBE0 894 aaKnown RBP19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 KCNB2Q92953 911 aa19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 CHD2O14647 1828 aaKnown RBP19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 LETM1O95202 739 aaPredicted RBP19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 NECTIN1Q15223 517 aa19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 ME3Q16798 604 aa19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
PCDHGA11-202ENST00000518882 TTC12Q9H892 705 aaPredicted RBP19.84■□□□□ 0.77
PCDHGA11-202ENST00000518882 C9orf78Q9NZ63 289 aaPredicted RBP19.84■□□□□ 0.77
PCDHGA11-202ENST00000518882 DBF4Q9UBU7 674 aaPredicted RBP19.84■□□□□ 0.77
PCDHGA11-202ENST00000518882 ATP6V1DQ9Y5K8 247 aa19.84■□□□□ 0.77
PCDHGA11-202ENST00000518882 CYP46A1Q9Y6A2 500 aa19.84■□□□□ 0.77
PCDHGA11-202ENST00000518882 PXDNQ92626 1479 aa19.84■□□□□ 0.77
PCDHGA11-202ENST00000518882 CCDC171Q6TFL3 1326 aa19.84■□□□□ 0.77
PCDHGA11-202ENST00000518882 PRAMEF22A3QJZ6 481 aa19.83■□□□□ 0.77
PCDHGA11-202ENST00000518882 THEMISQ8N1K5 641 aaPredicted RBP19.83■□□□□ 0.77
PCDHGA11-202ENST00000518882 NECAB1Q8N987 351 aa19.83■□□□□ 0.77
PCDHGA11-202ENST00000518882 TM6SF1Q9BZW5 370 aa19.83■□□□□ 0.77
PCDHGA11-202ENST00000518882 PHF8Q9UPP1 1060 aa19.83■□□□□ 0.77
PCDHGA11-202ENST00000518882 IFIT2P09913 472 aaKnown RBP19.83■□□□□ 0.76
PCDHGA11-202ENST00000518882 AKAP4Q5JQC9 854 aa19.83■□□□□ 0.76
PCDHGA11-202ENST00000518882 FAM227BQ96M60 508 aa19.83■□□□□ 0.76
PCDHGA11-202ENST00000518882 DYNC1I1O14576 645 aa19.82■□□□□ 0.76
PCDHGA11-202ENST00000518882 AACSQ86V21 672 aa19.82■□□□□ 0.76
PCDHGA11-202ENST00000518882 ZMYND15Q9H091 742 aa19.82■□□□□ 0.76
PCDHGA11-202ENST00000518882 C17orf53Q8N3J3 647 aaPredicted RBP19.82■□□□□ 0.76
PCDHGA11-202ENST00000518882 EVI5LQ96CN4 794 aa19.82■□□□□ 0.76
PCDHGA11-202ENST00000518882 SH2B1Q9NRF2 756 aaPredicted RBP19.82■□□□□ 0.76
PCDHGA11-202ENST00000518882 RBM8AQ9Y5S9 174 aaKnown RBP19.82■□□□□ 0.76
PCDHGA11-202ENST00000518882 VPS37CA5D8V6 355 aaPredicted RBP19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 AP5Z1O43299 807 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 KDM4AO75164 1064 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 PIBF1Q8WXW3 757 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 KAZALD1Q96I82 304 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 ZSCAN31Q96LW9 406 aaPredicted RBP19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 TPCN1Q9ULQ1 816 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 FER1L4A9Z1Z3 1794 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 GIGYF1O75420 1035 aaPredicted RBP19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 ALDH1L1O75891 902 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 SASH1O94885 1247 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 CREB3L3Q68CJ9 461 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 KSR2Q6VAB6 950 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 CHMP4AQ9BY43 222 aa19.81■□□□□ 0.76
PCDHGA11-202ENST00000518882 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
PCDHGA11-202ENST00000518882 EAF2Q96CJ1 260 aaPredicted RBP19.8■□□□□ 0.76
PCDHGA11-202ENST00000518882 GPATCH3Q96I76 525 aa19.8■□□□□ 0.76
PCDHGA11-202ENST00000518882 NMIQ13287 307 aaPredicted RBP19.79■□□□□ 0.76
PCDHGA11-202ENST00000518882 ERC1Q8IUD2 1116 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms