RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PRR5LQ6MZQ0 368 aa17.38■□□□□ 0.37
VEGFA-219ENST00000518824 FAM9BQ8IZU0 186 aa17.38■□□□□ 0.37
VEGFA-219ENST00000518824 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-219ENST00000518824 BCS1LQ9Y276 419 aa17.37■□□□□ 0.37
VEGFA-219ENST00000518824 WWC1Q8IX03 1113 aa17.36■□□□□ 0.37
VEGFA-219ENST00000518824 SETDB2Q96T68 719 aa17.36■□□□□ 0.37
VEGFA-219ENST00000518824 ZBTB3Q9H5J0 574 aa17.36■□□□□ 0.37
VEGFA-219ENST00000518824 IFT57Q9NWB7 429 aa17.36■□□□□ 0.37
VEGFA-219ENST00000518824 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
VEGFA-219ENST00000518824 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
VEGFA-219ENST00000518824 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
VEGFA-219ENST00000518824 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
VEGFA-219ENST00000518824 CLEC4GQ6UXB4 293 aa17.35■□□□□ 0.37
VEGFA-219ENST00000518824 MAP3K15Q6ZN16 1313 aa17.35■□□□□ 0.37
VEGFA-219ENST00000518824 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
VEGFA-219ENST00000518824 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
VEGFA-219ENST00000518824 C8orf58Q8NAV2 365 aa17.34■□□□□ 0.37
VEGFA-219ENST00000518824 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
VEGFA-219ENST00000518824 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
VEGFA-219ENST00000518824 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
VEGFA-219ENST00000518824 DLEC1Q9Y238 1755 aa17.34■□□□□ 0.37
VEGFA-219ENST00000518824 GNAI1P63096 354 aa17.33■□□□□ 0.36
VEGFA-219ENST00000518824 CCDC27Q2M243 656 aa17.33■□□□□ 0.36
VEGFA-219ENST00000518824 TSPYL6Q8N831 410 aa17.33■□□□□ 0.36
VEGFA-219ENST00000518824 ARFGEF1Q9Y6D6 1849 aa17.33■□□□□ 0.36
VEGFA-219ENST00000518824 UBN2Q6ZU65 1347 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 ERVV-1B6SEH8 477 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 GPTP24298 496 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 AIMP1Q12904 312 aaKnown RBP17.32■□□□□ 0.36
VEGFA-219ENST00000518824 HDGFL1Q5TGJ6 251 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 C2CD5Q86YS7 1000 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 CNBD1Q8NA66 436 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 PIM2Q9P1W9 311 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 ZNF652Q9Y2D9 606 aa17.32■□□□□ 0.36
VEGFA-219ENST00000518824 KIF6Q6ZMV9 814 aa17.31■□□□□ 0.36
VEGFA-219ENST00000518824 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-219ENST00000518824 DDX21Q9NR30 783 aaKnown RBP eCLIP17.31■□□□□ 0.36
VEGFA-219ENST00000518824 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
VEGFA-219ENST00000518824 ZNF428Q96B54 188 aa17.3■□□□□ 0.36
VEGFA-219ENST00000518824 BRIP1Q9BX63 1249 aa17.3■□□□□ 0.36
VEGFA-219ENST00000518824 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
VEGFA-219ENST00000518824 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
VEGFA-219ENST00000518824 CALD1Q05682 793 aaKnown RBP17.29■□□□□ 0.36
VEGFA-219ENST00000518824 DALRD3Q5D0E6 543 aaKnown RBP17.29■□□□□ 0.36
VEGFA-219ENST00000518824 SUSD4Q5VX71 490 aa17.29■□□□□ 0.36
VEGFA-219ENST00000518824 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
VEGFA-219ENST00000518824 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
VEGFA-219ENST00000518824 ZNF34Q8IZ26 560 aa17.29■□□□□ 0.36
VEGFA-219ENST00000518824 ZNF784Q8NCA9 323 aaPredicted RBP17.29■□□□□ 0.36
VEGFA-219ENST00000518824 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
VEGFA-219ENST00000518824 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
VEGFA-219ENST00000518824 RGL2O15211 777 aa17.28■□□□□ 0.36
VEGFA-219ENST00000518824 HOXB7P09629 217 aa17.28■□□□□ 0.36
VEGFA-219ENST00000518824 ARHGAP27Q6ZUM4 889 aa17.28■□□□□ 0.36
VEGFA-219ENST00000518824 H0YIN7 160 aa17.27■□□□□ 0.36
VEGFA-219ENST00000518824 TCERG1O14776 1098 aaKnown RBP17.27■□□□□ 0.36
VEGFA-219ENST00000518824 NPHP1O15259 732 aa17.27■□□□□ 0.36
VEGFA-219ENST00000518824 ZNF622Q969S3 477 aaKnown RBP eCLIP17.27■□□□□ 0.363e-16■□□□□ 9
VEGFA-219ENST00000518824 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
VEGFA-219ENST00000518824 ANKRD36CQ5JPF3 1778 aa17.27■□□□□ 0.35
VEGFA-219ENST00000518824 SLX4Q8IY92 1834 aa17.26■□□□□ 0.35
VEGFA-219ENST00000518824 PDE6BP35913 854 aa17.26■□□□□ 0.35
VEGFA-219ENST00000518824 ST5P78524 1137 aa17.26■□□□□ 0.35
VEGFA-219ENST00000518824 ERFEQ4G0M1 354 aa17.26■□□□□ 0.35
VEGFA-219ENST00000518824 NTSR2O95665 410 aa17.25■□□□□ 0.35
VEGFA-219ENST00000518824 SRGNP10124 158 aa17.25■□□□□ 0.35
VEGFA-219ENST00000518824 PRELPP51888 382 aa17.25■□□□□ 0.35
VEGFA-219ENST00000518824 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
VEGFA-219ENST00000518824 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
VEGFA-219ENST00000518824 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
VEGFA-219ENST00000518824 ZNF219Q9P2Y4 722 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-219ENST00000518824 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-219ENST00000518824 IL16Q14005 1332 aa17.24■□□□□ 0.35
VEGFA-219ENST00000518824 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
VEGFA-219ENST00000518824 RASSF7Q02833 373 aa17.24■□□□□ 0.35
VEGFA-219ENST00000518824 C3orf67Q6ZVT6 689 aa17.24■□□□□ 0.35
VEGFA-219ENST00000518824 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
VEGFA-219ENST00000518824 ADCY9O60503 1353 aa17.24■□□□□ 0.35
VEGFA-219ENST00000518824 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
VEGFA-219ENST00000518824 SLC51AQ86UW1 340 aa17.23■□□□□ 0.35
VEGFA-219ENST00000518824 WDR63Q8IWG1 891 aa17.23■□□□□ 0.35
VEGFA-219ENST00000518824 SBF1O95248 1867 aa17.22■□□□□ 0.35
VEGFA-219ENST00000518824 KLRG2A4D1S0 409 aaPredicted RBP17.22■□□□□ 0.35
VEGFA-219ENST00000518824 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
VEGFA-219ENST00000518824 HYPKQ9NX55 129 aa17.22■□□□□ 0.35
VEGFA-219ENST00000518824 ZNF521Q96K83 1311 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 ATP5J2-PTCD1G3V325 749 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 C21orf2O43822 256 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 GTF2E1P29083 439 aaPredicted RBP17.21■□□□□ 0.35
VEGFA-219ENST00000518824 TWISTNBQ3B726 338 aaPredicted RBP17.21■□□□□ 0.35
VEGFA-219ENST00000518824 STYK1Q6J9G0 422 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 G2E3Q7L622 706 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 PLBD2Q8NHP8 589 aa17.21■□□□□ 0.35
VEGFA-219ENST00000518824 IBTKQ9P2D0 1353 aaPredicted RBP17.2■□□□□ 0.34
VEGFA-219ENST00000518824 NFKBIEO00221 500 aa17.2■□□□□ 0.34
VEGFA-219ENST00000518824 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms