RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 A0A0G2JS52 829 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 IGFBP4P22692 258 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 ZNF784Q8NCA9 323 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 GIPC2Q8TF65 315 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 ZNF516Q92618 1163 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 FOXJ1Q92949 421 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 VTI1AQ96AJ9 217 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 ASB16Q96NS5 453 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 FCF1Q9Y324 198 aaKnown RBP7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 WASLO00401 505 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 FAM13AO94988 1023 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 MAPK1P28482 360 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 GGCXP38435 758 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 WNT7BP56706 349 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 NPAS4Q8IUM7 802 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 GTF3C2Q8WUA4 911 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 NGLY1Q96IV0 654 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 QTRT2Q9H974 415 aaKnown RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 XIRP1Q702N8 1843 aaKnown RBP7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 ABCA6Q8N139 1617 aa7.27□□□□□ -1.25
HMGB1P23-201ENST00000518743 ITSN2Q9NZM3 1697 aa7.26□□□□□ -1.25
HMGB1P23-201ENST00000518743 ZNF518AQ6AHZ1 1483 aa7.26□□□□□ -1.25
HMGB1P23-201ENST00000518743 UNCXA6NJT0 531 aa7.26□□□□□ -1.25
HMGB1P23-201ENST00000518743 REREQ9P2R6 1566 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 SH3BP2P78314 561 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 CC2D2BQ6DHV5 1058 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 VASH1Q7L8A9 365 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 NKX2-3Q8TAU0 364 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 HELQQ8TDG4 1101 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 CITED4Q96RK1 184 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 IGSF5Q9NSI5 407 aa7.25□□□□□ -1.25
HMGB1P23-201ENST00000518743 LRRC9Q6ZRR7 1453 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 PLEKHD1A6NEE1 506 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 NDUFB5O43674 189 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 S1PR4O95977 384 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ZNF211Q13398 564 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ESCO1Q5FWF5 840 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ALKBH2Q6NS38 261 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 RGL4Q8IZJ4 473 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 TSEN2Q8NCE0 465 aaKnown RBP7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 CHMP3Q9Y3E7 222 aa7.24□□□□□ -1.25
HMGB1P23-201ENST00000518743 ABCC1P33527 1531 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 TCF3P15923 654 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 ERVK-9P63128 1117 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 DEFB132Q7Z7B7 95 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 AFAP1Q8N556 730 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 C8orf37Q96NL8 207 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 ZNF358Q9NW07 568 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 NWD1Q149M9 1564 aa7.23□□□□□ -1.25
HMGB1P23-201ENST00000518743 CTTNBP2Q8WZ74 1663 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 NPR3P17342 541 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 FKBP5Q13451 457 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 EAPPQ56P03 285 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 INTS6LQ5JSJ4 861 aaKnown RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 CYP2U1Q7Z449 544 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 MPNDQ8N594 471 aa7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 KIAA1522Q9P206 1035 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 COL16A1Q07092 1604 aaPredicted RBP7.22□□□□□ -1.25
HMGB1P23-201ENST00000518743 PLCH2O75038 1416 aa7.21□□□□□ -1.25
HMGB1P23-201ENST00000518743 DEPDC5O75140 1603 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 RPIAP49247 311 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 TRIM32Q13049 653 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 THEMISQ8N1K5 641 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 STAG2Q8N3U4 1231 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 MKNK1Q9BUB5 465 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 RBCK1Q9BYM8 510 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 DNMT3AQ9Y6K1 912 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 SHPRHQ149N8 1683 aa7.21□□□□□ -1.26
HMGB1P23-201ENST00000518743 FGD6Q6ZV73 1430 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 MED14O60244 1454 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 GNRH1P01148 92 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 GDF10P55107 478 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 RAB15P59190 212 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 ARHGAP4P98171 946 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 FBXO33Q7Z6M2 555 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 ANO2Q9NQ90 1003 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 USP35Q9P2H5 1018 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 SEPT3Q9UH03 358 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 BRPF3Q9ULD4 1205 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 FAM135AQ9P2D6 1515 aa7.2□□□□□ -1.26
HMGB1P23-201ENST00000518743 KDM5DQ9BY66 1539 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 IGSF3O75054 1194 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 CD2BP2O95400 341 aaKnown RBP7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 INHAP05111 366 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 PDE3BQ13370 1112 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 NOM1Q5C9Z4 860 aaKnown RBP7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 EFCAB2Q5VUJ9 269 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 C16orf46Q6P387 395 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 NBPF15Q8N660 670 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 ABTB2Q8N961 1025 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 SCG3Q8WXD2 468 aaKnown RBP7.19□□□□□ -1.26
HMGB1P23-201ENST00000518743 DMRTB1Q96MA1 342 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms