RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 CARMIL3Q8ND23 1372 aa13.52□□□□□ -0.24
SH2D4A-202ENST00000518040 WDR33Q9C0J8 1336 aaKnown RBP13.52□□□□□ -0.24
SH2D4A-202ENST00000518040 SLC52A2Q9HAB3 445 aa13.52□□□□□ -0.25
SH2D4A-202ENST00000518040 ZBTB1Q9Y2K1 713 aa13.52□□□□□ -0.25
SH2D4A-202ENST00000518040 AKAP4Q5JQC9 854 aa13.51□□□□□ -0.25
SH2D4A-202ENST00000518040 STYK1Q6J9G0 422 aa13.51□□□□□ -0.25
SH2D4A-202ENST00000518040 HACL1Q9UJ83 578 aa13.51□□□□□ -0.25
SH2D4A-202ENST00000518040 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
SH2D4A-202ENST00000518040 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
SH2D4A-202ENST00000518040 FXR2P51116 673 aaKnown RBP eCLIP13.5□□□□□ -0.25
SH2D4A-202ENST00000518040 EAPPQ56P03 285 aaPredicted RBP13.5□□□□□ -0.25
SH2D4A-202ENST00000518040 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
SH2D4A-202ENST00000518040 STARD3NLO95772 234 aa13.5□□□□□ -0.25
SH2D4A-202ENST00000518040 ECE1P42892 770 aa13.5□□□□□ -0.25
SH2D4A-202ENST00000518040 TNNT2P45379 298 aaPredicted RBP13.5□□□□□ -0.25
SH2D4A-202ENST00000518040 BICDL1Q6ZP65 573 aa13.5□□□□□ -0.25
SH2D4A-202ENST00000518040 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
SH2D4A-202ENST00000518040 CNTROBQ8N137 903 aa13.49□□□□□ -0.25
SH2D4A-202ENST00000518040 MASTLQ96GX5 879 aa13.49□□□□□ -0.25
SH2D4A-202ENST00000518040 ABT1Q9ULW3 272 aaKnown RBP13.49□□□□□ -0.25
SH2D4A-202ENST00000518040 ANKRD31Q8N7Z5 1873 aa13.48□□□□□ -0.25
SH2D4A-202ENST00000518040 NPHP1O15259 732 aa13.48□□□□□ -0.25
SH2D4A-202ENST00000518040 EPHX2P34913 555 aa13.48□□□□□ -0.25
SH2D4A-202ENST00000518040 EIF5P55010 431 aaKnown RBP13.48□□□□□ -0.25
SH2D4A-202ENST00000518040 ST5P78524 1137 aa13.48□□□□□ -0.25
SH2D4A-202ENST00000518040 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
SH2D4A-202ENST00000518040 MRC1P22897 1456 aa13.48□□□□□ -0.25
SH2D4A-202ENST00000518040 SRGNP10124 158 aa13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 CANXP27824 592 aaKnown RBP13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 CCDC93Q567U6 631 aa13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 CNBD1Q8NA66 436 aa13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 ADAMTSL1Q8N6G6 1762 aa13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 SULT6B1Q6IMI4 303 aa13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 NPM2Q86SE8 214 aaKnown RBP13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 AEBP1Q8IUX7 1158 aa13.47□□□□□ -0.25
SH2D4A-202ENST00000518040 COL11A2P13942 1736 aaPredicted RBP13.46□□□□□ -0.25
SH2D4A-202ENST00000518040 ARFGEF2Q9Y6D5 1785 aa13.46□□□□□ -0.25
SH2D4A-202ENST00000518040 CA12O43570 354 aa13.46□□□□□ -0.26
SH2D4A-202ENST00000518040 SLC39A6Q13433 755 aa13.46□□□□□ -0.26
SH2D4A-202ENST00000518040 SETDB2Q96T68 719 aa13.46□□□□□ -0.26
SH2D4A-202ENST00000518040 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.26
SH2D4A-202ENST00000518040 THSD7BQ9C0I4 1608 aa13.46□□□□□ -0.26
SH2D4A-202ENST00000518040 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
SH2D4A-202ENST00000518040 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
SH2D4A-202ENST00000518040 MAP1SQ66K74 1059 aaPredicted RBP13.45□□□□□ -0.26
SH2D4A-202ENST00000518040 DDX21Q9NR30 783 aaKnown RBP eCLIP13.45□□□□□ -0.26
SH2D4A-202ENST00000518040 SLX4Q8IY92 1834 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 MAP2K2P36507 400 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 RTKN2Q8IZC4 609 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 TTC5Q8N0Z6 440 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 GPC2Q8N158 579 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 CAPNS2Q96L46 248 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 GPR101Q96P66 508 aaPredicted RBP13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 SCN7AQ01118 1682 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 IL6STP40189 918 aaPredicted RBP13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 C7orf43Q8WVR3 580 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 LGR6Q9HBX8 967 aa13.44□□□□□ -0.26
SH2D4A-202ENST00000518040 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
SH2D4A-202ENST00000518040 CFAP44Q96MT7 982 aa13.43□□□□□ -0.26
SH2D4A-202ENST00000518040 ZNF541Q9H0D2 1346 aa13.43□□□□□ -0.26
SH2D4A-202ENST00000518040 FZD9O00144 591 aa13.42□□□□□ -0.26
SH2D4A-202ENST00000518040 NPR1P16066 1061 aa13.42□□□□□ -0.26
SH2D4A-202ENST00000518040 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
SH2D4A-202ENST00000518040 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
SH2D4A-202ENST00000518040 LMOD1P29536 600 aaPredicted RBP13.41□□□□□ -0.26
SH2D4A-202ENST00000518040 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
SH2D4A-202ENST00000518040 TBC1D2BQ9UPU7 963 aa13.41□□□□□ -0.26
SH2D4A-202ENST00000518040 UBR2Q8IWV8 1755 aa13.41□□□□□ -0.26
SH2D4A-202ENST00000518040 CACNA1SQ13698 1873 aa13.41□□□□□ -0.26
SH2D4A-202ENST00000518040 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
SH2D4A-202ENST00000518040 JDP2Q8WYK2 163 aa13.4□□□□□ -0.26
SH2D4A-202ENST00000518040 MCOLN1Q9GZU1 580 aa13.4□□□□□ -0.26
SH2D4A-202ENST00000518040 ZNF277Q9NRM2 450 aaPredicted RBP13.4□□□□□ -0.26
SH2D4A-202ENST00000518040 IL13P35225 146 aa13.4□□□□□ -0.26
SH2D4A-202ENST00000518040 ZNF330Q9Y3S2 320 aaPredicted RBP13.4□□□□□ -0.26
SH2D4A-202ENST00000518040 KLRG2A4D1S0 409 aaPredicted RBP13.39□□□□□ -0.27
SH2D4A-202ENST00000518040 ALDH1B1P30837 517 aa13.39□□□□□ -0.27
SH2D4A-202ENST00000518040 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
SH2D4A-202ENST00000518040 CYP4F22Q6NT55 531 aa13.39□□□□□ -0.27
SH2D4A-202ENST00000518040 CLEC4GQ6UXB4 293 aa13.39□□□□□ -0.27
SH2D4A-202ENST00000518040 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
SH2D4A-202ENST00000518040 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
SH2D4A-202ENST00000518040 HEG1Q9ULI3 1381 aa13.38□□□□□ -0.27
SH2D4A-202ENST00000518040 CAMTA2O94983 1202 aa13.38□□□□□ -0.27
SH2D4A-202ENST00000518040 USP50Q70EL3 339 aaPredicted RBP13.38□□□□□ -0.27
SH2D4A-202ENST00000518040 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
SH2D4A-202ENST00000518040 HHIPL1Q96JK4 782 aa13.38□□□□□ -0.27
SH2D4A-202ENST00000518040 ZNF652Q9Y2D9 606 aa13.38□□□□□ -0.27
SH2D4A-202ENST00000518040 GRM1Q13255 1194 aa13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 CC2D2BQ6DHV5 1058 aa13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 PSMD1Q99460 953 aa13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 RGL2O15211 777 aa13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 BRPF1P55201 1214 aaPredicted RBP13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 TPTE2Q6XPS3 522 aa13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
SH2D4A-202ENST00000518040 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
SH2D4A-202ENST00000518040 DGKZQ13574 1117 aa13.36□□□□□ -0.27
SH2D4A-202ENST00000518040 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms