RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 NGLY1Q96IV0 654 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 TUT1Q9H6E5 874 aaKnown RBP5.44□□□□□ -1.54
SKP1-203ENST00000517625 GMPR2Q9P2T1 348 aaKnown RBP5.44□□□□□ -1.54
SKP1-203ENST00000517625 PARP3Q9Y6F1 533 aa5.44□□□□□ -1.54
SKP1-203ENST00000517625 SENP3-EIF4A1A0A087X0R7 540 aa5.43□□□□□ -1.54
SKP1-203ENST00000517625 ZNF211Q13398 564 aaPredicted RBP5.43□□□□□ -1.54
SKP1-203ENST00000517625 DGKZQ13574 1117 aa5.43□□□□□ -1.54
SKP1-203ENST00000517625 NAA30Q147X3 362 aaPredicted RBP5.43□□□□□ -1.54
SKP1-203ENST00000517625 CAPN12Q6ZSI9 719 aa5.43□□□□□ -1.54
SKP1-203ENST00000517625 ZIC5Q96T25 663 aa5.43□□□□□ -1.54
SKP1-203ENST00000517625 GZF1Q9H116 711 aaPredicted RBP5.43□□□□□ -1.54
SKP1-203ENST00000517625 NEUROD4Q9HD90 331 aa5.43□□□□□ -1.54
SKP1-203ENST00000517625 C11orf16Q9NQ32 467 aa5.43□□□□□ -1.54
SKP1-203ENST00000517625 LRFN2Q9ULH4 789 aa5.43□□□□□ -1.54
SKP1-203ENST00000517625 A0A1W2PNR3 127 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 C11orf95C9JLR9 678 aaPredicted RBP5.42□□□□□ -1.54
SKP1-203ENST00000517625 RPLP1P05386 114 aaKnown RBP5.42□□□□□ -1.54
SKP1-203ENST00000517625 ERCC3P19447 782 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 NOM1Q5C9Z4 860 aaKnown RBP5.42□□□□□ -1.54
SKP1-203ENST00000517625 ARSJQ5FYB0 599 aaPredicted RBP5.42□□□□□ -1.54
SKP1-203ENST00000517625 NPAS3Q8IXF0 933 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 TRIM22Q8IYM9 498 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 CCDC155Q8N6L0 562 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 IFT43Q96FT9 208 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 SUSD3Q96L08 255 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 CITED4Q96RK1 184 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 SAP130Q9H0E3 1048 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 CCDC9Q9Y3X0 531 aaKnown RBP5.42□□□□□ -1.54
SKP1-203ENST00000517625 GJA3Q9Y6H8 435 aa5.42□□□□□ -1.54
SKP1-203ENST00000517625 LCE2BO14633 110 aa5.41□□□□□ -1.54
SKP1-203ENST00000517625 EPB42P16452 691 aa5.41□□□□□ -1.54
SKP1-203ENST00000517625 SCNN1AP37088 669 aa5.41□□□□□ -1.54
SKP1-203ENST00000517625 USP5P45974 858 aa5.41□□□□□ -1.54
SKP1-203ENST00000517625 LAMC2Q13753 1193 aa5.41□□□□□ -1.54
SKP1-203ENST00000517625 CCDC27Q2M243 656 aa5.41□□□□□ -1.54
SKP1-203ENST00000517625 BIN2Q9UBW5 565 aaPredicted RBP5.41□□□□□ -1.54
SKP1-203ENST00000517625 NDUFB5O43674 189 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 FAM157BP0CG42 384 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 SNRPBP14678 240 aaKnown RBP5.4□□□□□ -1.54
SKP1-203ENST00000517625 PCSK2P16519 638 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 ITGA6P23229 1130 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 MPSTP25325 297 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 ARSDP51689 593 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 ARHGAP4P98171 946 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 GAS2L1Q99501 681 aaPredicted RBP5.4□□□□□ -1.54
SKP1-203ENST00000517625 NUCKS1Q9H1E3 243 aaKnown RBP5.4□□□□□ -1.54
SKP1-203ENST00000517625 GPAMQ9HCL2 828 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 PODXL2Q9NZ53 605 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 KLK14Q9P0G3 267 aa5.4□□□□□ -1.54
SKP1-203ENST00000517625 SOBPA7XYQ1 873 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 MICAL2O94851 1124 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 MZF1P28698 734 aaPredicted RBP5.39□□□□□ -1.55
SKP1-203ENST00000517625 ZAP70P43403 619 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 EIF1AXP47813 144 aaKnown RBP5.39□□□□□ -1.55
SKP1-203ENST00000517625 ECM1Q16610 540 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 FOXR1Q6PIV2 292 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 BTLAQ7Z6A9 289 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 TREML1Q86YW5 311 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 ETFBKMTQ8IXQ9 262 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 NANOS1Q8WY41 292 aaKnown RBP5.39□□□□□ -1.55
SKP1-203ENST00000517625 RUBCNLQ9H714 662 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 EFCC1Q9HA90 598 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 DMGDHQ9UI17 866 aaKnown RBP5.39□□□□□ -1.55
SKP1-203ENST00000517625 DCTN4Q9UJW0 460 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 PHF24Q9UPV7 400 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 BCS1LQ9Y276 419 aa5.39□□□□□ -1.55
SKP1-203ENST00000517625 IDH3AP50213 366 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 MARSP56192 900 aaKnown RBP5.38□□□□□ -1.55
SKP1-203ENST00000517625 KCNQ4P56696 695 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 TYRO3Q06418 890 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 EHHADHQ08426 723 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 PDE3BQ13370 1112 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 MTMR3Q13615 1198 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 LRRC69Q6ZNQ3 347 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 RIPOR1Q6ZS17 1223 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 ZSCAN29Q8IWY8 852 aaPredicted RBP5.38□□□□□ -1.55
SKP1-203ENST00000517625 PIK3R5Q8WYR1 880 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 ZNF837Q96EG3 531 aaPredicted RBP5.38□□□□□ -1.55
SKP1-203ENST00000517625 HSH2DQ96JZ2 352 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 RBCK1Q9BYM8 510 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 ANO2Q9NQ90 1003 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 BRPF3Q9ULD4 1205 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 PCDHGC4Q9Y5F7 938 aa5.38□□□□□ -1.55
SKP1-203ENST00000517625 ATXN7O15265 892 aaPredicted RBP5.37□□□□□ -1.55
SKP1-203ENST00000517625 EFSO43281 561 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 PPFIA3O75145 1194 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 INPP5BP32019 993 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 MFAP1P55081 439 aaKnown RBP5.37□□□□□ -1.55
SKP1-203ENST00000517625 COL19A1Q14993 1142 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 ZNF280CQ8ND82 737 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 DMRTB1Q96MA1 342 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 TRERF1Q96PN7 1200 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 CFHR5Q9BXR6 569 aa5.37□□□□□ -1.55
SKP1-203ENST00000517625 ATXN7L1Q9ULK2 861 aaPredicted RBP5.37□□□□□ -1.55
SKP1-203ENST00000517625 FNDC3AQ9Y2H6 1198 aaKnown RBP5.37□□□□□ -1.55
SKP1-203ENST00000517625 FZD6O60353 706 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 EGFRP00533 1210 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 UBAP2LQ14157 1087 aaKnown RBP5.36□□□□□ -1.55
SKP1-203ENST00000517625 FAM182BQ5T319 152 aa5.36□□□□□ -1.55
SKP1-203ENST00000517625 SV2AQ7L0J3 742 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms