RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 DBF4Q9UBU7 674 aaPredicted RBP8.03□□□□□ -1.12
CDH12-203ENST00000517378 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.03□□□□□ -1.12
CDH12-203ENST00000517378 C5P01031 1676 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 AMOTQ4VCS5 1084 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 FOXD4L5Q5VV16 416 aaPredicted RBP8.03□□□□□ -1.12
CDH12-203ENST00000517378 RASEFQ8IZ41 740 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 RUFY2Q8WXA3 655 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 FOXD4L4Q8WXT5 416 aaPredicted RBP8.03□□□□□ -1.12
CDH12-203ENST00000517378 HDAC5Q9UQL6 1122 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 SCN11AQ9UI33 1791 aa8.03□□□□□ -1.12
CDH12-203ENST00000517378 LETM1O95202 739 aaPredicted RBP8.02□□□□□ -1.12
CDH12-203ENST00000517378 CSPP1Q1MSJ5 1256 aa8.02□□□□□ -1.12
CDH12-203ENST00000517378 CCDC183Q5T5S1 534 aa8.02□□□□□ -1.12
CDH12-203ENST00000517378 VPS53Q5VIR6 699 aa8.02□□□□□ -1.12
CDH12-203ENST00000517378 NOL8Q76FK4 1167 aaKnown RBP8.02□□□□□ -1.12
CDH12-203ENST00000517378 LTV1Q96GA3 475 aaPredicted RBP8.02□□□□□ -1.12
CDH12-203ENST00000517378 HYPKQ9NX55 129 aa8.02□□□□□ -1.12
CDH12-203ENST00000517378 JCADQ9P266 1359 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 KIF1AQ12756 1690 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 BTBD11A6QL63 1104 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 GADD45BO75293 160 aaPredicted RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 UBE2HP62256 183 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 ZSWIM6Q9HCJ5 1215 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 SH2B1Q9NRF2 756 aaPredicted RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 ECHDC1Q9NTX5 307 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 RNMTO43148 476 aaKnown RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 KCNQ3O43525 872 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 STX6O43752 255 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 F13A1P00488 732 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 PDIA4P13667 645 aaKnown RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 EIF2S2P20042 333 aaKnown RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 HSP90AA2PQ14568 343 aaPredicted RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 PLEKHO1Q53GL0 409 aaPredicted RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 CLASRPQ8N2M8 674 aaKnown RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 GPATCH3Q96I76 525 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 ZSCAN31Q96LW9 406 aaPredicted RBP8.02□□□□□ -1.13
CDH12-203ENST00000517378 ATP6V1DQ9Y5K8 247 aa8.02□□□□□ -1.13
CDH12-203ENST00000517378 GIGYF1O75420 1035 aaPredicted RBP8.01□□□□□ -1.13
CDH12-203ENST00000517378 MAP4K4O95819 1239 aaPredicted RBP8.01□□□□□ -1.13
CDH12-203ENST00000517378 SYT1P21579 422 aa8.01□□□□□ -1.13
CDH12-203ENST00000517378 TEFQ10587 303 aa8.01□□□□□ -1.13
CDH12-203ENST00000517378 ZNF530Q6P9A1 599 aaPredicted RBP8.01□□□□□ -1.13
CDH12-203ENST00000517378 CWC27Q6UX04 472 aaKnown RBP8.01□□□□□ -1.13
CDH12-203ENST00000517378 KSR2Q6VAB6 950 aa8.01□□□□□ -1.13
CDH12-203ENST00000517378 EVI5LQ96CN4 794 aa8.01□□□□□ -1.13
CDH12-203ENST00000517378 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
CDH12-203ENST00000517378 NECTIN1Q15223 517 aa8.01□□□□□ -1.13
CDH12-203ENST00000517378 DIAPH3Q9NSV4 1193 aa8.01□□□□□ -1.13
CDH12-203ENST00000517378 ALS2Q96Q42 1657 aa8□□□□□ -1.13
CDH12-203ENST00000517378 CCDC171Q6TFL3 1326 aa8□□□□□ -1.13
CDH12-203ENST00000517378 HIP1O00291 1037 aa8□□□□□ -1.13
CDH12-203ENST00000517378 CASTP20810 708 aaKnown RBP8□□□□□ -1.13
CDH12-203ENST00000517378 FUCA2Q9BTY2 467 aa8□□□□□ -1.13
CDH12-203ENST00000517378 GDPD2Q9HCC8 539 aa8□□□□□ -1.13
CDH12-203ENST00000517378 MAP3K2Q9Y2U5 619 aa8□□□□□ -1.13
CDH12-203ENST00000517378 RGPD5Q99666 1765 aa8□□□□□ -1.13
CDH12-203ENST00000517378 MED23Q9ULK4 1368 aa8□□□□□ -1.13
CDH12-203ENST00000517378 LARGE1O95461 756 aa8□□□□□ -1.13
CDH12-203ENST00000517378 PTH1RQ03431 593 aa8□□□□□ -1.13
CDH12-203ENST00000517378 ARHGEF25Q86VW2 580 aa8□□□□□ -1.13
CDH12-203ENST00000517378 LINS1Q8NG48 757 aa8□□□□□ -1.13
CDH12-203ENST00000517378 ALDH8A1Q9H2A2 487 aaPredicted RBP8□□□□□ -1.13
CDH12-203ENST00000517378 SPG7Q9UQ90 795 aa8□□□□□ -1.13
CDH12-203ENST00000517378 SMC3Q9UQE7 1217 aa8□□□□□ -1.13
CDH12-203ENST00000517378 MTMR6Q9Y217 621 aa8□□□□□ -1.13
CDH12-203ENST00000517378 CNPY2Q9Y2B0 182 aa8□□□□□ -1.13
CDH12-203ENST00000517378 NPHP4O75161 1426 aaPredicted RBP8□□□□□ -1.13
CDH12-203ENST00000517378 SETD1BQ9UPS6 1966 aaKnown RBP8□□□□□ -1.13
CDH12-203ENST00000517378 COL15A1P39059 1388 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 ST3GAL1Q11201 340 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 RNF214Q8ND24 703 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 MAP4K1Q92918 833 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 DNAJC5Q9H3Z4 198 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 PDRG1Q9NUG6 133 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 LAMB4A4D0S4 1761 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 RFX7Q2KHR2 1363 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 XPCQ01831 940 aaPredicted RBP7.99□□□□□ -1.13
CDH12-203ENST00000517378 ADCK5Q3MIX3 580 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 C1orf141Q5JVX7 400 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 KAZALD1Q96I82 304 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 CYP46A1Q9Y6A2 500 aa7.99□□□□□ -1.13
CDH12-203ENST00000517378 GRM8O00222 908 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 IFIT2P09913 472 aaKnown RBP7.98□□□□□ -1.13
CDH12-203ENST00000517378 GJB2P29033 226 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 OS9Q13438 667 aaPredicted RBP7.98□□□□□ -1.13
CDH12-203ENST00000517378 PROSER3Q2NL68 480 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 MPRIPQ6WCQ1 1025 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 LRRC59Q96AG4 307 aaKnown RBP7.98□□□□□ -1.13
CDH12-203ENST00000517378 PDCL3Q9H2J4 239 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 C9orf78Q9NZ63 289 aaPredicted RBP7.98□□□□□ -1.13
CDH12-203ENST00000517378 GLI3P10071 1580 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 PARP4Q9UKK3 1724 aaKnown RBP7.98□□□□□ -1.13
CDH12-203ENST00000517378 ANXA1P04083 346 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 PDIA6Q15084 440 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 GLIPR1L2Q4G1C9 344 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 PKD1L3Q7Z443 1732 aa7.98□□□□□ -1.13
CDH12-203ENST00000517378 JAKMIP1Q96N16 626 aaKnown RBP7.98□□□□□ -1.13
CDH12-203ENST00000517378 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
CDH12-203ENST00000517378 ARFGEF2Q9Y6D5 1785 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms