RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 C3orf80F5H4A9 247 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 TATP17735 454 aaPredicted RBP7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 DDB1Q16531 1140 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 CSPP1Q1MSJ5 1256 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 SULT6B1Q6IMI4 303 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 RSBN1LQ6PCB5 846 aaPredicted RBP7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 KRT27Q7Z3Y8 459 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ZNF710Q8N1W2 664 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 BCL2L12Q9HB09 334 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 NWD2Q9ULI1 1742 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 MYBBP1AQ9BQG0 1328 aaKnown RBP7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 LTN1O94822 1766 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 COL18A1P39060 1754 aa7.74□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PLCH1Q4KWH8 1693 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 HMOX1P09601 288 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 POTEJP0CG39 1038 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 U2AF1L5P0DN76 240 aaPredicted RBP7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 DNAJB2P25686 324 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 U2AF1Q01081 240 aaKnown RBP eCLIP7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 FAM182BQ5T319 152 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 DDX54Q8TDD1 881 aaKnown RBP7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 TATDN2Q93075 761 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PNMA3Q9UL41 463 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 LMO7Q8WWI1 1683 aa7.73□□□□□ -1.17
SCARNA6.1-201ENST00000516989 RGPD5Q99666 1765 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PSDA5PKW4 1024 aaPredicted RBP7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PPP1R3GB7ZBB8 358 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 NDUFV2P19404 249 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PTPREP23469 700 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 IFFO2Q5TF58 517 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 DIEXFQ68CQ4 756 aaKnown RBP7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PACS2Q86VP3 889 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 AEBP1Q8IUX7 1158 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 MTMR14Q8NCE2 650 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ZCRB1Q8TBF4 217 aaKnown RBP7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 GDPD2Q9HCC8 539 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 PLSCR2Q9NRY7 297 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ABCC6O95255 1503 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 ANKRD26Q9UPS8 1709 aa7.72□□□□□ -1.17
SCARNA6.1-201ENST00000516989 NBPF26B4DH59 902 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 LILRB3O75022 631 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 GJA5P36382 358 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 QPCTQ16769 361 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PLEKHO1Q53GL0 409 aaPredicted RBP7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PCDHB15Q9Y5E8 787 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 NRAPQ86VF7 1730 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PEAK1Q9H792 1746 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 IGSF1Q8N6C5 1336 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 GLI3P10071 1580 aa7.71□□□□□ -1.18
SCARNA6.1-201ENST00000516989 CDK12Q9NYV4 1490 aaPredicted RBP7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 TRIM6-TRIM34B2RNG4 842 aa7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 AP1G2O75843 785 aa7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 RTL5Q5HYW3 569 aaPredicted RBP7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 POTEHQ6S545 545 aa7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 FAM196AQ6ZSG2 479 aa7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 MARCH10Q8NA82 808 aaPredicted RBP7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 SPG7Q9UQ90 795 aa7.7□□□□□ -1.18
SCARNA6.1-201ENST00000516989 RGS12O14924 1447 aa7.69□□□□□ -1.18
SCARNA6.1-201ENST00000516989 NEFMP07197 916 aa7.69□□□□□ -1.18
SCARNA6.1-201ENST00000516989 WDR43Q15061 677 aaKnown RBP eCLIP7.69□□□□□ -1.18
SCARNA6.1-201ENST00000516989 WWC1Q8IX03 1113 aa7.69□□□□□ -1.18
SCARNA6.1-201ENST00000516989 RDH13Q8NBN7 331 aa7.69□□□□□ -1.18
SCARNA6.1-201ENST00000516989 SP7Q8TDD2 431 aaPredicted RBP7.69□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PRM3Q9NNZ6 103 aa7.69□□□□□ -1.18
SCARNA6.1-201ENST00000516989 SMAPO00193 183 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PRKAR2BP31323 418 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 ABL2P42684 1182 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 SF3B2Q13435 895 aaKnown RBP7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 AMOTQ4VCS5 1084 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 CCDC184Q52MB2 194 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 IFNL2Q8IZJ0 200 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 ACSBG1Q96GR2 724 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PNNQ9H307 717 aaKnown RBP7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 MRS2Q9HD23 443 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 DISP2A7MBM2 1401 aa7.68□□□□□ -1.18
SCARNA6.1-201ENST00000516989 CYP27B1O15528 508 aa7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 KDM4AO75164 1064 aa7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 TRIM37O94972 964 aa7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 C1orf141Q5JVX7 400 aa7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 ZNF530Q6P9A1 599 aaPredicted RBP7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 SYTL4Q96C24 671 aaPredicted RBP7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 ADAMTS8Q9UP79 889 aa7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 MEGF6O75095 1541 aa7.67□□□□□ -1.18
SCARNA6.1-201ENST00000516989 POTEB2H3BUK9 544 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 HSP90AB1P08238 724 aaKnown RBP7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 MTHFSDQ2M296 383 aaKnown RBP7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PROX2Q3B8N5 592 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 NECTIN2Q92692 538 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PHACTR3Q96KR7 559 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 TBC1D2BQ9UPU7 963 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PCDH11XQ9BZA7 1347 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PCDH11YQ9BZA8 1340 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 RGPD2P0DJD1 1756 aa7.66□□□□□ -1.18
SCARNA6.1-201ENST00000516989 OVOS2A0A0G2JMS6 1433 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 KCNQ2O43526 872 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 APBA3O96018 575 aa7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 COL3A1P02461 1466 aaPredicted RBP7.65□□□□□ -1.18
SCARNA6.1-201ENST00000516989 PHKG2P15735 406 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms