RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 USP17L2Q6R6M4 530 aa5.56□□□□□ -1.52
SNORA40.14-201ENST00000516543 USP17L1Q7RTZ2 530 aa5.56□□□□□ -1.52
SNORA40.14-201ENST00000516543 SLC30A3Q99726 388 aa5.56□□□□□ -1.52
SNORA40.14-201ENST00000516543 PRR12Q9ULL5 1215 aa5.56□□□□□ -1.52
SNORA40.14-201ENST00000516543 HCN4Q9Y3Q4 1203 aa5.56□□□□□ -1.52
SNORA40.14-201ENST00000516543 RAD21O60216 631 aa5.55□□□□□ -1.52
SNORA40.14-201ENST00000516543 RAB44Q7Z6P3 723 aaPredicted RBP5.55□□□□□ -1.52
SNORA40.14-201ENST00000516543 SYT9Q86SS6 491 aa5.55□□□□□ -1.52
SNORA40.14-201ENST00000516543 HSH2DQ96JZ2 352 aa5.55□□□□□ -1.52
SNORA40.14-201ENST00000516543 MDFIQ99750 246 aa5.55□□□□□ -1.52
SNORA40.14-201ENST00000516543 AVENQ9NQS1 362 aaPredicted RBP5.55□□□□□ -1.52
SNORA40.14-201ENST00000516543 SERTM1A2A2V5 107 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 SFI1A8K8P3 1242 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 K7ELQ4 463 aaPredicted RBP5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 DKK1O94907 266 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 PLEKHM2Q8IWE5 1019 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 WWC1Q8IX03 1113 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 OGFOD1Q8N543 542 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 TSEN2Q8NCE0 465 aaKnown RBP5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 ZNF280CQ8ND82 737 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 RHPN1Q8TCX5 695 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 CLUAP1Q96AJ1 413 aa5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 MKRN1Q9UHC7 482 aaKnown RBP5.54□□□□□ -1.52
SNORA40.14-201ENST00000516543 ELOA3CA0A087WX78 387 aaPredicted RBP5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 ELOA3DA6NLF2 546 aaPredicted RBP5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 C21orf2O43822 256 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 ATP9BO43861 1147 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 LGR5O75473 907 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 ELOA3BQ3SY89 546 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 C8orf86Q6ZUL3 223 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 ALYREFQ86V81 257 aaKnown RBP5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 ELOA3Q8NG57 546 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 GAS2L2Q8NHY3 880 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 ZNF594Q96JF6 807 aaPredicted RBP5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 PLVAPQ9BX97 442 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 PHACTR1Q9C0D0 580 aa5.53□□□□□ -1.52
SNORA40.14-201ENST00000516543 ITGB7P26010 798 aa5.52□□□□□ -1.53
SNORA40.14-201ENST00000516543 LAMC2Q13753 1193 aa5.52□□□□□ -1.53
SNORA40.14-201ENST00000516543 COL9A3Q14050 684 aaPredicted RBP5.52□□□□□ -1.53
SNORA40.14-201ENST00000516543 XP32Q5T750 250 aa5.52□□□□□ -1.53
SNORA40.14-201ENST00000516543 TRIM50Q86XT4 487 aa5.52□□□□□ -1.53
SNORA40.14-201ENST00000516543 STARD13Q9Y3M8 1113 aa5.52□□□□□ -1.53
SNORA40.14-201ENST00000516543 ATP1A2P50993 1020 aa5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 PSMA6P60900 246 aaKnown RBP5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 FLIIQ13045 1269 aa5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 DOC2BQ14184 412 aa5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 POTEAQ6S8J7 498 aa5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 NEUROD4Q9HD90 331 aa5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 BRD7Q9NPI1 651 aa5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 NOP53Q9NZM5 478 aaKnown RBP5.51□□□□□ -1.53
SNORA40.14-201ENST00000516543 FAM229AH3BQW9 127 aa5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 SIN3BO75182 1162 aa5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 ALBP02768 609 aa5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 SPEM2Q0P670 501 aa5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 FNBP4Q8N3X1 1017 aaPredicted RBP5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 LARGE2Q8N3Y3 721 aa5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 SUSD3Q96L08 255 aa5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 CEP63Q96MT8 703 aa5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 TFIP11Q9UBB9 837 aaKnown RBP5.5□□□□□ -1.53
SNORA40.14-201ENST00000516543 PALM3A6NDB9 673 aaPredicted RBP5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 M0R082 166 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 PIK3R2O00459 728 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 PPP1R12BO60237 982 aaPredicted RBP5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 TYRO3Q06418 890 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 C1orf53Q5VUE5 145 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 ALDH16A1Q8IZ83 802 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 SIX5Q8N196 739 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 ZNF417Q8TAU3 575 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 GLMNQ92990 594 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 TNFRSF25Q93038 417 aa5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 ZNF587Q96SQ5 575 aaPredicted RBP5.49□□□□□ -1.53
SNORA40.14-201ENST00000516543 ATAD2Q6PL18 1390 aa5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 ADARB2-AS1A8MUL3 147 aa5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 M0R2N6 131 aa5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 RASA1P20936 1047 aa5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 ALAS2P22557 587 aa5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 HIRAP54198 1017 aaPredicted RBP5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 MICALL1Q8N3F8 863 aa5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 CHMP7Q8WUX9 453 aaPredicted RBP5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 SCG3Q8WXD2 468 aaKnown RBP5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 NGLY1Q96IV0 654 aa5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 MAFBQ9Y5Q3 323 aaPredicted RBP5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 GPC6Q9Y625 555 aaPredicted RBP5.48□□□□□ -1.53
SNORA40.14-201ENST00000516543 SPATA31C1P0DKV0 1188 aa5.47□□□□□ -1.53
SNORA40.14-201ENST00000516543 ADH7P40394 386 aa5.47□□□□□ -1.53
SNORA40.14-201ENST00000516543 CRTC2Q53ET0 693 aaPredicted RBP5.47□□□□□ -1.53
SNORA40.14-201ENST00000516543 BHMTQ93088 406 aa5.47□□□□□ -1.53
SNORA40.14-201ENST00000516543 C2orf49Q9BVC5 232 aaPredicted RBP5.47□□□□□ -1.53
SNORA40.14-201ENST00000516543 KCNH4Q9UQ05 1017 aa5.47□□□□□ -1.53
SNORA40.14-201ENST00000516543 NID1P14543 1247 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 GATA4P43694 442 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 KCNQ4P56696 695 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 TBC1D8BQ0IIM8 1120 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 GRIK4Q16099 956 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 C20orf204Q6ZNR8 217 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 BTLAQ7Z6A9 289 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 PROSER2Q86WR7 435 aaPredicted RBP5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 Q8N3U1 123 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 SEMA6BQ9H3T3 888 aa5.46□□□□□ -1.54
SNORA40.14-201ENST00000516543 BCS1LQ9Y276 419 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms