RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 TTC21BQ7Z4L5 1316 aa3.66□□□□□ -1.82
RNU1-48P-201ENST00000516400 SSC5DA1L4H1 1573 aa3.65□□□□□ -1.82
RNU1-48P-201ENST00000516400 ZBTB7CA1YPR0 619 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 GNPATO15228 680 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 TRPA1O75762 1119 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 HMGB2P26583 209 aaKnown RBP3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 SCNN1DP51172 638 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 KIF23Q02241 960 aaPredicted RBP3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 NOGQ13253 232 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 EAPPQ56P03 285 aaPredicted RBP3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 UBE2Q1Q7Z7E8 422 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 FAM122AQ96E09 287 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 R3HDMLQ9H3Y0 253 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 BCL2L12Q9HB09 334 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 PARP3Q9Y6F1 533 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 CD163L1Q9NR16 1453 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 MAP3K19Q56UN5 1328 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 RNF123Q5XPI4 1314 aa3.65□□□□□ -1.83
RNU1-48P-201ENST00000516400 SPTBN4Q9H254 2564 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 TRANK1O15050 2925 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 MUC6Q6W4X9 2439 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 SETXQ7Z333 2677 aaKnown RBP3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 A0A1W2PPC1 479 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 EPS15P42566 896 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 HIRAP54198 1017 aaPredicted RBP3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 GRM1Q13255 1194 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 DLK2Q6UY11 383 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 MPRIPQ6WCQ1 1025 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 Q7L0L9 218 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 SYNE4Q8N205 404 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 ZNF296Q8WUU4 475 aaPredicted RBP3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 CFHR5Q9BXR6 569 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 ATG3Q9NT62 314 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 CABP1Q9NZU7 370 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 SRP68Q9UHB9 627 aaKnown RBP3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 ASAP1Q9ULH1 1129 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 CHD7Q9P2D1 2997 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 VPS13AQ96RL7 3174 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 CNTNAP4Q9C0A0 1308 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 USP42Q9H9J4 1324 aaKnown RBP3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 PKD1L2Q7Z442 2459 aa3.64□□□□□ -1.83
RNU1-48P-201ENST00000516400 NCAPD2Q15021 1401 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 CHD6Q8TD26 2715 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 COL2A1P02458 1487 aaPredicted RBP3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 C21orf2O43822 256 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 KCNA4P22459 653 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 DSG3P32926 999 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 AKAP4Q5JQC9 854 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 NBPF6Q5VWK0 638 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 IP6K1Q92551 441 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 SMARCC1Q92922 1105 aaPredicted RBP3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 ARMC5Q96C12 935 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 NBPF4Q96M43 638 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 CLEC11AQ9Y240 323 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 RTCBQ9Y3I0 505 aaKnown RBP3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 DMXL1Q9Y485 3027 aa3.63□□□□□ -1.83
RNU1-48P-201ENST00000516400 TAF1P21675 1872 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 COL3A1P02461 1466 aaPredicted RBP3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 POTEB2H3BUK9 544 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 ATP6V1AP38606 617 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 NFIXQ14938 502 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 INTS3Q68E01 1043 aaKnown RBP3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 USP50Q70EL3 339 aaPredicted RBP3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 GPC2Q8N158 579 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 GUCD1Q96NT3 240 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 GLIS2Q9BZE0 524 aaPredicted RBP3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 TAOK3Q9H2K8 898 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 ZSWIM8A7E2V4 1837 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 TTC21AQ8NDW8 1320 aa3.62□□□□□ -1.83
RNU1-48P-201ENST00000516400 MRC1P22897 1456 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 GPR25O00155 361 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 CELF2O95319 508 aaKnown RBP3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 SLC10A3P09131 477 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 MAP3K12Q12852 859 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 FAM50AQ14320 339 aaKnown RBP3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 RGMBQ6NW40 437 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 INTS5Q6P9B9 1019 aaKnown RBP3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 PAXIP1Q6ZW49 1069 aaPredicted RBP3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 CCDC24Q8N4L8 307 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 DEFB123Q8N688 67 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 TRPM4Q8TD43 1214 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 CABP2Q9NPB3 220 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 CGNL1Q0VF96 1302 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 SBNO2Q9Y2G9 1366 aa3.61□□□□□ -1.83
RNU1-48P-201ENST00000516400 TCF20Q9UGU0 1960 aaKnown RBP3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 KLRG2A4D1S0 409 aaPredicted RBP3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 WTIPA6NIX2 430 aaPredicted RBP3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 SOX12O15370 315 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 TBC1D8O95759 1140 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 SERPINB2P05120 415 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 BMP8BP34820 402 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 RFC4P35249 363 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 TM4SF4P48230 202 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 LRIT3Q3SXY7 679 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 OLFM4Q6UX06 510 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 C2CD5Q86YS7 1000 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 SHISA4Q96DD7 197 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 GDF15Q99988 308 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 UNC79Q9P2D8 2635 aa3.6□□□□□ -1.83
RNU1-48P-201ENST00000516400 FRYLO94915 3013 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms