RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
ABCC3-216ENST00000515585 USP44Q9H0E7 712 aa17.39■□□□□ 0.37
ABCC3-216ENST00000515585 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
ABCC3-216ENST00000515585 SPON1Q9HCB6 807 aa17.39■□□□□ 0.37
ABCC3-216ENST00000515585 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
ABCC3-216ENST00000515585 NUP98P52948 1817 aa17.39■□□□□ 0.37
ABCC3-216ENST00000515585 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
ABCC3-216ENST00000515585 BCORQ6W2J9 1755 aa17.38■□□□□ 0.37
ABCC3-216ENST00000515585 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
ABCC3-216ENST00000515585 A1BGP04217 495 aa17.38■□□□□ 0.37
ABCC3-216ENST00000515585 FAM196AQ6ZSG2 479 aa17.38■□□□□ 0.37
ABCC3-216ENST00000515585 ZNF784Q8NCA9 323 aaPredicted RBP17.38■□□□□ 0.37
ABCC3-216ENST00000515585 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
ABCC3-216ENST00000515585 SRCIN1Q9C0H9 1055 aa17.38■□□□□ 0.37
ABCC3-216ENST00000515585 UTYO14607 1347 aa17.38■□□□□ 0.37
ABCC3-216ENST00000515585 ANKRD44Q8N8A2 993 aa17.37■□□□□ 0.37
ABCC3-216ENST00000515585 LINS1Q8NG48 757 aa17.37■□□□□ 0.37
ABCC3-216ENST00000515585 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
ABCC3-216ENST00000515585 UTRNP46939 3433 aa17.37■□□□□ 0.37
ABCC3-216ENST00000515585 STARD3NLO95772 234 aa17.36■□□□□ 0.37
ABCC3-216ENST00000515585 GNAI3P08754 354 aa17.36■□□□□ 0.37
ABCC3-216ENST00000515585 MYL6BP14649 208 aa17.36■□□□□ 0.37
ABCC3-216ENST00000515585 CEP85Q6P2H3 762 aa17.36■□□□□ 0.37
ABCC3-216ENST00000515585 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
ABCC3-216ENST00000515585 RPAP2Q8IXW5 612 aaPredicted RBP17.36■□□□□ 0.37
ABCC3-216ENST00000515585 PLBD2Q8NHP8 589 aa17.36■□□□□ 0.37
ABCC3-216ENST00000515585 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
ABCC3-216ENST00000515585 METTL22Q9BUU2 404 aaPredicted RBP17.36■□□□□ 0.37
ABCC3-216ENST00000515585 C1orf115Q9H7X2 142 aa17.36■□□□□ 0.37
ABCC3-216ENST00000515585 LOC102724428A0A0B4J2F2 783 aa17.35■□□□□ 0.37
ABCC3-216ENST00000515585 IGKV5-2P06315 115 aa17.35■□□□□ 0.37
ABCC3-216ENST00000515585 PIP4K2AP48426 406 aaPredicted RBP17.35■□□□□ 0.37
ABCC3-216ENST00000515585 SIK1P57059 783 aa17.35■□□□□ 0.37
ABCC3-216ENST00000515585 COL15A1P39059 1388 aa17.35■□□□□ 0.37
ABCC3-216ENST00000515585 ITPK1Q13572 414 aa17.34■□□□□ 0.37
ABCC3-216ENST00000515585 PTF1AQ7RTS3 328 aa17.34■□□□□ 0.37
ABCC3-216ENST00000515585 GNAI2P04899 355 aa17.33■□□□□ 0.36
ABCC3-216ENST00000515585 TTLL7Q6ZT98 887 aa17.33■□□□□ 0.36
ABCC3-216ENST00000515585 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
ABCC3-216ENST00000515585 NEURL1BA8MQ27 555 aa17.32■□□□□ 0.36
ABCC3-216ENST00000515585 AIMP1Q12904 312 aaKnown RBP17.32■□□□□ 0.36
ABCC3-216ENST00000515585 INTS5Q6P9B9 1019 aaKnown RBP17.32■□□□□ 0.36
ABCC3-216ENST00000515585 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
ABCC3-216ENST00000515585 SCN7AQ01118 1682 aa17.32■□□□□ 0.36
ABCC3-216ENST00000515585 RGPD3A6NKT7 1758 aaPredicted RBP17.31■□□□□ 0.36
ABCC3-216ENST00000515585 RGPD4Q7Z3J3 1758 aa17.31■□□□□ 0.36
ABCC3-216ENST00000515585 TNS1Q9HBL0 1735 aaKnown RBP17.31■□□□□ 0.36
ABCC3-216ENST00000515585 IL6STP40189 918 aaPredicted RBP17.31■□□□□ 0.36
ABCC3-216ENST00000515585 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
ABCC3-216ENST00000515585 CWF19L2Q2TBE0 894 aaKnown RBP17.31■□□□□ 0.36
ABCC3-216ENST00000515585 RIC3Q7Z5B4 369 aa17.31■□□□□ 0.36
ABCC3-216ENST00000515585 DCTPP1Q9H773 170 aa17.31■□□□□ 0.36
ABCC3-216ENST00000515585 NBPF7P0C2Y1 421 aaPredicted RBP17.3■□□□□ 0.36
ABCC3-216ENST00000515585 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
ABCC3-216ENST00000515585 MTX1Q13505 466 aa17.3■□□□□ 0.36
ABCC3-216ENST00000515585 GCC1Q96CN9 775 aa17.3■□□□□ 0.36
ABCC3-216ENST00000515585 CNTNAP4Q9C0A0 1308 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 UBTFL1P0CB47 393 aaPredicted RBP17.29■□□□□ 0.36
ABCC3-216ENST00000515585 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 CASP7P55210 303 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 ATP8B2P98198 1209 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 GCKRQ14397 625 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 ISCA1Q9BUE6 129 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
ABCC3-216ENST00000515585 CCDC87Q9NVE4 849 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 LRRFIP2Q9Y608 721 aaKnown RBP17.29■□□□□ 0.36
ABCC3-216ENST00000515585 C4BP0C0L5 1744 aa17.29■□□□□ 0.36
ABCC3-216ENST00000515585 MAP3K15Q6ZN16 1313 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 GRM8O00222 908 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 NUCB1Q02818 461 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
ABCC3-216ENST00000515585 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 KAZALD1Q96I82 304 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 MYD88Q99836 296 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 UBR3Q6ZT12 1888 aa17.28■□□□□ 0.36
ABCC3-216ENST00000515585 C4AP0C0L4 1744 aa17.27■□□□□ 0.36
ABCC3-216ENST00000515585 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.36
ABCC3-216ENST00000515585 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
ABCC3-216ENST00000515585 POLA2Q14181 598 aa17.27■□□□□ 0.36
ABCC3-216ENST00000515585 LAMB2P55268 1798 aa17.27■□□□□ 0.35
ABCC3-216ENST00000515585 MYH3P11055 1940 aa17.27■□□□□ 0.35
ABCC3-216ENST00000515585 ERVV-1B6SEH8 477 aa17.26■□□□□ 0.35
ABCC3-216ENST00000515585 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
ABCC3-216ENST00000515585 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
ABCC3-216ENST00000515585 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
ABCC3-216ENST00000515585 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
ABCC3-216ENST00000515585 H7C1W4 665 aa17.25■□□□□ 0.35
ABCC3-216ENST00000515585 RGL2O15211 777 aa17.25■□□□□ 0.35
ABCC3-216ENST00000515585 TCIRG1Q13488 830 aa17.25■□□□□ 0.35
ABCC3-216ENST00000515585 GIGYF2Q6Y7W6 1299 aaKnown RBP17.25■□□□□ 0.35
ABCC3-216ENST00000515585 COL24A1Q17RW2 1714 aa17.24■□□□□ 0.35
ABCC3-216ENST00000515585 HMMRO75330 724 aa17.24■□□□□ 0.35
ABCC3-216ENST00000515585 PDE4AP27815 886 aa17.24■□□□□ 0.35
ABCC3-216ENST00000515585 CCDC191Q8NCU4 936 aa17.24■□□□□ 0.35
ABCC3-216ENST00000515585 HDAC5Q9UQL6 1122 aa17.24■□□□□ 0.35
ABCC3-216ENST00000515585 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
ABCC3-216ENST00000515585 KIF6Q6ZMV9 814 aa17.23■□□□□ 0.35
ABCC3-216ENST00000515585 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms