RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
HMGXB3-205ENST00000514469 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
HMGXB3-205ENST00000514469 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
HMGXB3-205ENST00000514469 SENP3-EIF4A1A0A087X0R7 540 aa13.74□□□□□ -0.21
HMGXB3-205ENST00000514469 KIF3CO14782 793 aa13.74□□□□□ -0.21
HMGXB3-205ENST00000514469 RASSF7Q02833 373 aa13.74□□□□□ -0.21
HMGXB3-205ENST00000514469 HLFQ16534 295 aa13.74□□□□□ -0.21
HMGXB3-205ENST00000514469 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
HMGXB3-205ENST00000514469 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
HMGXB3-205ENST00000514469 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
HMGXB3-205ENST00000514469 TIAM2Q8IVF5 1701 aa13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 TNRC6CQ9HCJ0 1690 aaKnown RBP13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 NPHP1O15259 732 aa13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 ZEB1P37275 1124 aaPredicted RBP13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 TRIM35Q9UPQ4 493 aa13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 NIP7Q9Y221 180 aaKnown RBP eCLIP13.73□□□□□ -0.21
HMGXB3-205ENST00000514469 IBTKQ9P2D0 1353 aaPredicted RBP13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 SBF1O95248 1867 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 ZC3H4Q9UPT8 1303 aaKnown RBP13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 NFKBIEO00221 500 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 SRGNP10124 158 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 STYK1Q6J9G0 422 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 KIF6Q6ZMV9 814 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 LRP10Q7Z4F1 713 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 ZNF622Q969S3 477 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■□□□ 12.3
HMGXB3-205ENST00000514469 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
HMGXB3-205ENST00000514469 KLRG2A4D1S0 409 aaPredicted RBP13.71□□□□□ -0.21
HMGXB3-205ENST00000514469 CHL1O00533 1208 aa13.71□□□□□ -0.21
HMGXB3-205ENST00000514469 MYL6BP14649 208 aa13.71□□□□□ -0.21
HMGXB3-205ENST00000514469 PRELPP51888 382 aa13.71□□□□□ -0.21
HMGXB3-205ENST00000514469 PDIA6Q15084 440 aa13.71□□□□□ -0.21
HMGXB3-205ENST00000514469 NEUROD2Q15784 382 aa13.71□□□□□ -0.21
HMGXB3-205ENST00000514469 FER1L6Q2WGJ9 1857 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 CEP350Q5VT06 3117 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 NUP98P52948 1817 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 LMNB1P20700 586 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 PRPF40BQ6NWY9 871 aaKnown RBP13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 TPTE2Q6XPS3 522 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 CNKSR1Q969H4 720 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 NMRK2Q9NPI5 230 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 ABCC12Q96J65 1359 aa13.7□□□□□ -0.22
HMGXB3-205ENST00000514469 UBN2Q6ZU65 1347 aa13.69□□□□□ -0.22
HMGXB3-205ENST00000514469 LTBP3Q9NS15 1303 aa13.69□□□□□ -0.22
HMGXB3-205ENST00000514469 C21orf2O43822 256 aa13.69□□□□□ -0.22
HMGXB3-205ENST00000514469 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
HMGXB3-205ENST00000514469 SLX4Q8IY92 1834 aa13.69□□□□□ -0.22
HMGXB3-205ENST00000514469 KDM2BQ8NHM5 1336 aa13.68□□□□□ -0.22
HMGXB3-205ENST00000514469 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
HMGXB3-205ENST00000514469 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
HMGXB3-205ENST00000514469 NPR1P16066 1061 aa13.68□□□□□ -0.22
HMGXB3-205ENST00000514469 PROSER3Q2NL68 480 aa13.68□□□□□ -0.22
HMGXB3-205ENST00000514469 GIGYF2Q6Y7W6 1299 aaKnown RBP13.68□□□□□ -0.22
HMGXB3-205ENST00000514469 NYXQ9GZU5 481 aa13.68□□□□□ -0.22
HMGXB3-205ENST00000514469 EIF2S2P20042 333 aaKnown RBP13.67□□□□□ -0.22
HMGXB3-205ENST00000514469 KRT24Q2M2I5 525 aa13.67□□□□□ -0.22
HMGXB3-205ENST00000514469 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
HMGXB3-205ENST00000514469 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
HMGXB3-205ENST00000514469 ZNF219Q9P2Y4 722 aaPredicted RBP13.67□□□□□ -0.22
HMGXB3-205ENST00000514469 ANKRD36CQ5JPF3 1778 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 TOMM70O94826 608 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 ANXA1P04083 346 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 HOXB7P09629 217 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 GPTP24298 496 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 CRY2Q49AN0 593 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 C7orf43Q8WVR3 580 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 CFAP44Q96MT7 982 aa13.66□□□□□ -0.22
HMGXB3-205ENST00000514469 APAF1O14727 1248 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 NTSR2O95665 410 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 ZNF853P0CG23 659 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 HSPA6P17066 643 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 GTF2E1P29083 439 aaPredicted RBP13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 ERFEQ4G0M1 354 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 NUTM1Q86Y26 1132 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 TAOK3Q9H2K8 898 aa13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
HMGXB3-205ENST00000514469 SNED1Q8TER0 1413 aa13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 GLTPD2A6NH11 291 aa13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 PARP10Q53GL7 1025 aa13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 NECTIN2Q92692 538 aa13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 DDX21Q9NR30 783 aaKnown RBP eCLIP13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 MBIPQ9NS73 344 aa13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 DICER1Q9UPY3 1922 aaKnown RBP13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 WDR90Q96KV7 1748 aa13.64□□□□□ -0.23
HMGXB3-205ENST00000514469 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 COPS6Q7L5N1 327 aa13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 XAGE3Q8WTP9 111 aa13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 RNF123Q5XPI4 1314 aa13.63□□□□□ -0.23
HMGXB3-205ENST00000514469 CCDC88AQ3V6T2 1871 aa13.62□□□□□ -0.23
HMGXB3-205ENST00000514469 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms