RNA–Protein interactions for RNA: ENST00000513965.5

COPG1-208, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 730 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-208ENST00000513965 SRGNP10124 158 aa15.21■□□□□ 0.03
COPG1-208ENST00000513965 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
COPG1-208ENST00000513965 DCTN1Q14203 1278 aa15.21■□□□□ 0.03
COPG1-208ENST00000513965 STYK1Q6J9G0 422 aa15.21■□□□□ 0.03
COPG1-208ENST00000513965 MASTLQ96GX5 879 aa15.21■□□□□ 0.03
COPG1-208ENST00000513965 RSPH6AQ9H0K4 717 aa15.21■□□□□ 0.03
COPG1-208ENST00000513965 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
COPG1-208ENST00000513965 MKRN1Q9UHC7 482 aaKnown RBP15.2■□□□□ 0.02
COPG1-208ENST00000513965 NUDCQ9Y266 331 aa15.2■□□□□ 0.02
COPG1-208ENST00000513965 CCDC88AQ3V6T2 1871 aa15.2■□□□□ 0.02
COPG1-208ENST00000513965 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
COPG1-208ENST00000513965 UBR2Q8IWV8 1755 aa15.19■□□□□ 0.02
COPG1-208ENST00000513965 SNRPA1P09661 255 aaKnown RBP15.19■□□□□ 0.02
COPG1-208ENST00000513965 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
COPG1-208ENST00000513965 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
COPG1-208ENST00000513965 PCNTO95613 3336 aa15.19■□□□□ 0.02
COPG1-208ENST00000513965 CEMIPQ8WUJ3 1361 aa15.19■□□□□ 0.02
COPG1-208ENST00000513965 OLFM4Q6UX06 510 aa15.18■□□□□ 0.02
COPG1-208ENST00000513965 NGEFQ8N5V2 710 aa15.18■□□□□ 0.02
COPG1-208ENST00000513965 NIP7Q9Y221 180 aaKnown RBP eCLIP15.18■□□□□ 0.02
COPG1-208ENST00000513965 ZNF652Q9Y2D9 606 aa15.18■□□□□ 0.02
COPG1-208ENST00000513965 DLEC1Q9Y238 1755 aa15.18■□□□□ 0.02
COPG1-208ENST00000513965 ANKRD31Q8N7Z5 1873 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 NPC1L1Q9UHC9 1359 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 NBPF26B4DH59 902 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 GTF2E1P29083 439 aaPredicted RBP15.17■□□□□ 0.02
COPG1-208ENST00000513965 SOGA3Q5TF21 947 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 NBPF10Q6P3W6 841 aaKnown RBP15.17■□□□□ 0.02
COPG1-208ENST00000513965 CLEC4GQ6UXB4 293 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 TPTE2Q6XPS3 522 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 ZNF277Q9NRM2 450 aaPredicted RBP15.17■□□□□ 0.02
COPG1-208ENST00000513965 LTBP3Q9NS15 1303 aa15.17■□□□□ 0.02
COPG1-208ENST00000513965 NPR1P16066 1061 aa15.16■□□□□ 0.02
COPG1-208ENST00000513965 EAPPQ56P03 285 aaPredicted RBP15.16■□□□□ 0.02
COPG1-208ENST00000513965 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
COPG1-208ENST00000513965 SLX4Q8IY92 1834 aa15.15■□□□□ 0.02
COPG1-208ENST00000513965 TIAM2Q8IVF5 1701 aa15.15■□□□□ 0.02
COPG1-208ENST00000513965 PPP2R1AP30153 589 aa15.15■□□□□ 0.02
COPG1-208ENST00000513965 HLFQ16534 295 aa15.15■□□□□ 0.02
COPG1-208ENST00000513965 CCDC93Q567U6 631 aa15.15■□□□□ 0.02
COPG1-208ENST00000513965 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
COPG1-208ENST00000513965 CLEC11AQ9Y240 323 aa15.15■□□□□ 0.02
COPG1-208ENST00000513965 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
COPG1-208ENST00000513965 IQCA1LA6NCM1 817 aa15.13■□□□□ 0.01
COPG1-208ENST00000513965 COL11A2P13942 1736 aaPredicted RBP15.13■□□□□ 0.01
COPG1-208ENST00000513965 TAF1DQ9H5J8 278 aaPredicted RBP15.13■□□□□ 0.01
COPG1-208ENST00000513965 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
COPG1-208ENST00000513965 LDHDQ86WU2 507 aa15.12■□□□□ 0.01
COPG1-208ENST00000513965 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
COPG1-208ENST00000513965 SYNE4Q8N205 404 aa15.12■□□□□ 0.01
COPG1-208ENST00000513965 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
COPG1-208ENST00000513965 SCN7AQ01118 1682 aa15.12■□□□□ 0.01
COPG1-208ENST00000513965 ZNF541Q9H0D2 1346 aa15.12■□□□□ 0.01
COPG1-208ENST00000513965 FER1L6Q2WGJ9 1857 aa15.12■□□□□ 0.01
COPG1-208ENST00000513965 SIPA1L3O60292 1781 aaPredicted RBP15.11■□□□□ 0.01
COPG1-208ENST00000513965 ALDH1B1P30837 517 aa15.11■□□□□ 0.01
COPG1-208ENST00000513965 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
COPG1-208ENST00000513965 KLRG2A4D1S0 409 aaPredicted RBP15.1■□□□□ 0.01
COPG1-208ENST00000513965 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
COPG1-208ENST00000513965 HTATSF1O43719 755 aaKnown RBP15.1■□□□□ 0.01
COPG1-208ENST00000513965 HACL1Q9UJ83 578 aa15.1■□□□□ 0.01
COPG1-208ENST00000513965 MYL6BP14649 208 aa15.09■□□□□ 0.01
COPG1-208ENST00000513965 GPTP24298 496 aa15.09■□□□□ 0.01
COPG1-208ENST00000513965 EPHX2P34913 555 aa15.09■□□□□ 0.01
COPG1-208ENST00000513965 IARSP41252 1262 aaKnown RBP15.09■□□□□ 0.01
COPG1-208ENST00000513965 L3MBTL3Q96JM7 780 aaPredicted RBP15.09■□□□□ 0.01
COPG1-208ENST00000513965 CACNA1SQ13698 1873 aa15.09■□□□□ 0.01
COPG1-208ENST00000513965 TMEM88BA6NKF7 163 aa15.08■□□□□ 0
COPG1-208ENST00000513965 ITGBL1O95965 494 aaPredicted RBP15.08■□□□□ 0
COPG1-208ENST00000513965 NEFMP07197 916 aa15.08■□□□□ 0
COPG1-208ENST00000513965 VEGFBP49765 207 aa15.08■□□□□ 0
COPG1-208ENST00000513965 MAP1SQ66K74 1059 aaPredicted RBP15.08■□□□□ 0
COPG1-208ENST00000513965 TTLL7Q6ZT98 887 aa15.08■□□□□ 0
COPG1-208ENST00000513965 THUMPD2Q9BTF0 503 aaKnown RBP15.08■□□□□ 0
COPG1-208ENST00000513965 GJA3Q9Y6H8 435 aa15.08■□□□□ 0
COPG1-208ENST00000513965 RNF123Q5XPI4 1314 aa15.08■□□□□ 0
COPG1-208ENST00000513965 PASKQ96RG2 1323 aa15.08■□□□□ 0
COPG1-208ENST00000513965 DICER1Q9UPY3 1922 aaKnown RBP15.07■□□□□ 0
COPG1-208ENST00000513965 FOXN1O15353 648 aa15.07■□□□□ 0
COPG1-208ENST00000513965 KIF6Q6ZMV9 814 aa15.07■□□□□ 0
COPG1-208ENST00000513965 CNTROBQ8N137 903 aa15.07■□□□□ 0
COPG1-208ENST00000513965 JDP2Q8WYK2 163 aa15.07■□□□□ 0
COPG1-208ENST00000513965 RPGRQ92834 1020 aaKnown RBP15.07■□□□□ 0
COPG1-208ENST00000513965 ZBTB3Q9H5J0 574 aa15.07■□□□□ 0
COPG1-208ENST00000513965 FZD9O00144 591 aa15.06■□□□□ 0
COPG1-208ENST00000513965 NYXQ9GZU5 481 aa15.06■□□□□ 0
COPG1-208ENST00000513965 CNTNAP1P78357 1384 aa15.06■□□□□ 0
COPG1-208ENST00000513965 SLC51AQ86UW1 340 aa15.05■□□□□ -0
COPG1-208ENST00000513965 PNMA8AQ86V59 439 aaPredicted RBP15.05■□□□□ -0
COPG1-208ENST00000513965 PNISRQ8TF01 805 aaKnown RBP15.05■□□□□ -0
COPG1-208ENST00000513965 AIDAQ96BJ3 306 aa15.05■□□□□ -0
COPG1-208ENST00000513965 BCORQ6W2J9 1755 aa15.05■□□□□ -0
COPG1-208ENST00000513965 ABCC12Q96J65 1359 aa15.04■□□□□ -0
COPG1-208ENST00000513965 MAP3K15Q6ZN16 1313 aa15.04■□□□□ -0
COPG1-208ENST00000513965 ERVV-1B6SEH8 477 aa15.04■□□□□ -0
COPG1-208ENST00000513965 RGL2O15211 777 aa15.04■□□□□ -0
COPG1-208ENST00000513965 EIF6P56537 245 aaKnown RBP15.04■□□□□ -0
COPG1-208ENST00000513965 EIF4A1P60842 406 aaKnown RBP15.04■□□□□ -0
COPG1-208ENST00000513965 SUSD4Q5VX71 490 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms