RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	SEC31A	O94979	1220 aa	Known RBP	13.14	□□□□□ -0.31
PDCD6-210	ENST00000513582	CPA1	P15085	419 aa		13.14	□□□□□ -0.31
PDCD6-210	ENST00000513582	CASQ1	P31415	396 aa		13.14	□□□□□ -0.31
PDCD6-210	ENST00000513582	PLA2G4D	Q86XP0	818 aa		13.14	□□□□□ -0.31
PDCD6-210	ENST00000513582	RGS12	O14924	1447 aa		13.14	□□□□□ -0.31
PDCD6-210	ENST00000513582	CCDC171	Q6TFL3	1326 aa		13.14	□□□□□ -0.31
PDCD6-210	ENST00000513582	RTL1	A6NKG5	1358 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	ABCA6	Q8N139	1617 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	ZNF165	P49910	485 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	DACT1	Q9NYF0	836 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	USP16	Q9Y5T5	823 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	ADGRB2	O60241	1585 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	PTPRC	P08575	1304 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	GOLGA6L4	A6NEF3	574 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	FOXO3	O43524	673 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	FAM193A	P78312	1265 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	CCDC34	Q96HJ3	373 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	PPRC1	Q5VV67	1664 aa	Known RBP	13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	NEURL4	Q96JN8	1562 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	TPM4	P67936	248 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	NFE2L2	Q16236	605 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	SLFNL1	Q499Z3	407 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	CCDC83	Q8IWF9	413 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	NUDT16	Q96DE0	195 aa	Known RBP	13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	DRC1	Q96MC2	740 aa		13.13	□□□□□ -0.31
PDCD6-210	ENST00000513582	FOSB	P53539	338 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	HSP90AB2P	Q58FF8	381 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	TMCO3	Q6UWJ1	677 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	EP400NL	Q6ZTU2	488 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	MEIS3	Q99687	375 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	H2AFX	P16104	143 aa	Predicted RBP	13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	NLRP6	P59044	892 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	ICE2	Q659A1	982 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	NYAP1	Q6ZVC0	841 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	DHX37	Q8IY37	1157 aa	Known RBP	13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582		A0A1W2PP64	1363 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	PTCH1	Q13635	1447 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	ANXA1	P04083	346 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	GJB2	P29033	226 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	AK2	P54819	239 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	YY1AP1	Q9H869	796 aa		13.12	□□□□□ -0.31
PDCD6-210	ENST00000513582	PIK3R4	Q99570	1358 aa		13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	VWDE	Q8N2E2	1590 aa		13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	RERE	Q9P2R6	1566 aa		13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	CCDC69	A6NI79	296 aa		13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	BRPF1	P55201	1214 aa	Predicted RBP	13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	IL25	Q9H293	177 aa		13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	EFCAB6	Q5THR3	1501 aa		13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	INO80	Q9ULG1	1556 aa	Predicted RBP	13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	GPS2	Q13227	327 aa		13.11	□□□□□ -0.31
PDCD6-210	ENST00000513582	GOLGA6L19	H0YKK7	550 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	CHML	P26374	656 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	LMAN1	P49257	510 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	ANAPC15	P60006	121 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	SART3	Q15020	963 aa	Known RBP	13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	TTC6	Q86TZ1	520 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	FBXW7	Q969H0	707 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	SIRT1	Q96EB6	747 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	FCHSD2	O94868	740 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	OAS2	P29728	719 aa	Known RBP	13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	TFIP11	Q9UBB9	837 aa	Known RBP	13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	NSD2	O96028	1365 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	LARGE1	O95461	756 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	AIMP1	Q12904	312 aa	Known RBP	13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	CCAR2	Q8N163	923 aa	Known RBP	13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	PUS7	Q96PZ0	661 aa	Known RBP	13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	EPC1	Q9H2F5	836 aa		13.1	□□□□□ -0.31
PDCD6-210	ENST00000513582	HMMR	O75330	724 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	LMOD3	Q0VAK6	560 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	SNW1	Q13573	536 aa	Known RBP	13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	UNC5CL	Q8IV45	518 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582		A0A087WWV3	80 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	CAST	P20810	708 aa	Known RBP	13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	MUM1L1	Q5H9M0	696 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	RNF20	Q5VTR2	975 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	NUTM1	Q86Y26	1132 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	CWC15	Q9P013	229 aa	Known RBP	13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	MTMR6	Q9Y217	621 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	RRP15	Q9Y3B9	282 aa	Known RBP	13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	RUFY3	Q7L099	469 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	UBXN4	Q92575	508 aa		13.09	□□□□□ -0.31
PDCD6-210	ENST00000513582	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	RNF216	Q9NWF9	866 aa	Predicted RBP	13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	GOLGA6L1	Q8N7Z2	621 aa		13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	ANKRD65	E5RJM6	399 aa		13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	PSEN1	P49768	467 aa		13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	SRL	Q86TD4	932 aa		13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	TDRD7	Q8NHU6	1098 aa	Known RBP	13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	LIMCH1	Q9UPQ0	1083 aa		13.08	□□□□□ -0.32
PDCD6-210	ENST00000513582	SURF6	O75683	361 aa	Known RBP	13.07	□□□□□ -0.32
PDCD6-210	ENST00000513582	E2F4	Q16254	413 aa		13.07	□□□□□ -0.32
PDCD6-210	ENST00000513582	HOMER1	Q86YM7	354 aa		13.07	□□□□□ -0.32
PDCD6-210	ENST00000513582	BICD2	Q8TD16	824 aa		13.07	□□□□□ -0.32
PDCD6-210	ENST00000513582	MYCBP	Q99417	103 aa	Predicted RBP	13.07	□□□□□ -0.32
PDCD6-210	ENST00000513582	JRKL	Q9Y4A0	524 aa		13.07	□□□□□ -0.32
PDCD6-210	ENST00000513582	ABCA9	Q8IUA7	1624 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms