RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 APAF1O14727 1248 aa18.25■□□□□ 0.51
ABCC3-212ENST00000513511 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
ABCC3-212ENST00000513511 CNBD1Q8NA66 436 aa18.25■□□□□ 0.51
ABCC3-212ENST00000513511 ANKRD31Q8N7Z5 1873 aa18.24■□□□□ 0.51
ABCC3-212ENST00000513511 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
ABCC3-212ENST00000513511 HSPA6P17066 643 aa18.23■□□□□ 0.51
ABCC3-212ENST00000513511 PDE6BP35913 854 aa18.23■□□□□ 0.51
ABCC3-212ENST00000513511 ST5P78524 1137 aa18.23■□□□□ 0.51
ABCC3-212ENST00000513511 COL11A2P13942 1736 aaPredicted RBP18.23■□□□□ 0.51
ABCC3-212ENST00000513511 SBF1O95248 1867 aa18.22■□□□□ 0.51
ABCC3-212ENST00000513511 C16orf71Q8IYS4 520 aaPredicted RBP18.22■□□□□ 0.51
ABCC3-212ENST00000513511 FAM9BQ8IZU0 186 aa18.22■□□□□ 0.51
ABCC3-212ENST00000513511 BRIP1Q9BX63 1249 aa18.22■□□□□ 0.51
ABCC3-212ENST00000513511 ZNF652Q9Y2D9 606 aa18.22■□□□□ 0.51
ABCC3-212ENST00000513511 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
ABCC3-212ENST00000513511 FAM177BA6PVY3 158 aa18.21■□□□□ 0.51
ABCC3-212ENST00000513511 NBPF26B4DH59 902 aa18.21■□□□□ 0.51
ABCC3-212ENST00000513511 NBPF10Q6P3W6 841 aaKnown RBP18.21■□□□□ 0.51
ABCC3-212ENST00000513511 NBPF5PQ86XG9 351 aaPredicted RBP18.21■□□□□ 0.51
ABCC3-212ENST00000513511 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
ABCC3-212ENST00000513511 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
ABCC3-212ENST00000513511 KDM2BQ8NHM5 1336 aa18.21■□□□□ 0.51
ABCC3-212ENST00000513511 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
ABCC3-212ENST00000513511 TOMM70O94826 608 aa18.2■□□□□ 0.5
ABCC3-212ENST00000513511 LMNB1P20700 586 aa18.2■□□□□ 0.5
ABCC3-212ENST00000513511 C21orf2O43822 256 aa18.19■□□□□ 0.5
ABCC3-212ENST00000513511 RRAGCQ9HB90 399 aa18.19■□□□□ 0.5
ABCC3-212ENST00000513511 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
ABCC3-212ENST00000513511 TIAM2Q8IVF5 1701 aa18.18■□□□□ 0.5
ABCC3-212ENST00000513511 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
ABCC3-212ENST00000513511 NFKBIEO00221 500 aa18.17■□□□□ 0.5
ABCC3-212ENST00000513511 PRELPP51888 382 aa18.17■□□□□ 0.5
ABCC3-212ENST00000513511 CLEC4GQ6UXB4 293 aa18.17■□□□□ 0.5
ABCC3-212ENST00000513511 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
ABCC3-212ENST00000513511 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
ABCC3-212ENST00000513511 CCDC88AQ3V6T2 1871 aa18.17■□□□□ 0.5
ABCC3-212ENST00000513511 TNRC6CQ9HCJ0 1690 aaKnown RBP18.16■□□□□ 0.5
ABCC3-212ENST00000513511 MYL6BP14649 208 aa18.16■□□□□ 0.5
ABCC3-212ENST00000513511 EIF4A1P60842 406 aaKnown RBP18.16■□□□□ 0.5
ABCC3-212ENST00000513511 HLFQ16534 295 aa18.16■□□□□ 0.5
ABCC3-212ENST00000513511 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
ABCC3-212ENST00000513511 CNKSR1Q969H4 720 aa18.15■□□□□ 0.5
ABCC3-212ENST00000513511 SRGNP10124 158 aa18.14■□□□□ 0.49
ABCC3-212ENST00000513511 GTF2E1P29083 439 aaPredicted RBP18.14■□□□□ 0.49
ABCC3-212ENST00000513511 MIER1Q8N108 512 aa18.14■□□□□ 0.49
ABCC3-212ENST00000513511 MASTLQ96GX5 879 aa18.14■□□□□ 0.49
ABCC3-212ENST00000513511 LAS1LQ9Y4W2 734 aaKnown RBP18.14■□□□□ 0.49
ABCC3-212ENST00000513511 STYK1Q6J9G0 422 aa18.13■□□□□ 0.49
ABCC3-212ENST00000513511 TPTE2Q6XPS3 522 aa18.13■□□□□ 0.49
ABCC3-212ENST00000513511 KIF6Q6ZMV9 814 aa18.13■□□□□ 0.49
ABCC3-212ENST00000513511 RBM46Q8TBY0 533 aaKnown RBP18.13■□□□□ 0.49
ABCC3-212ENST00000513511 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
ABCC3-212ENST00000513511 SLX4Q8IY92 1834 aa18.13■□□□□ 0.49
ABCC3-212ENST00000513511 ZC3H4Q9UPT8 1303 aaKnown RBP18.13■□□□□ 0.49
ABCC3-212ENST00000513511 APLP1P51693 650 aa18.12■□□□□ 0.49
ABCC3-212ENST00000513511 ERFEQ4G0M1 354 aa18.12■□□□□ 0.49
ABCC3-212ENST00000513511 TTLL7Q6ZT98 887 aa18.12■□□□□ 0.49
ABCC3-212ENST00000513511 TAOK3Q9H2K8 898 aa18.12■□□□□ 0.49
ABCC3-212ENST00000513511 ZBTB3Q9H5J0 574 aa18.12■□□□□ 0.49
ABCC3-212ENST00000513511 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
ABCC3-212ENST00000513511 GLTPD2A6NH11 291 aa18.11■□□□□ 0.49
ABCC3-212ENST00000513511 CHL1O00533 1208 aa18.11■□□□□ 0.49
ABCC3-212ENST00000513511 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
ABCC3-212ENST00000513511 CCDC27Q2M243 656 aa18.11■□□□□ 0.49
ABCC3-212ENST00000513511 SALL2Q9Y467 1007 aaPredicted RBP18.11■□□□□ 0.49
ABCC3-212ENST00000513511 ARFGEF2Q9Y6D5 1785 aa18.1■□□□□ 0.49
ABCC3-212ENST00000513511 MAP3K15Q6ZN16 1313 aa18.1■□□□□ 0.49
ABCC3-212ENST00000513511 GPTP24298 496 aa18.1■□□□□ 0.49
ABCC3-212ENST00000513511 CALD1Q05682 793 aaKnown RBP18.1■□□□□ 0.49
ABCC3-212ENST00000513511 NUTM1Q86Y26 1132 aa18.1■□□□□ 0.49
ABCC3-212ENST00000513511 WWC1Q8IX03 1113 aa18.1■□□□□ 0.49
ABCC3-212ENST00000513511 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
ABCC3-212ENST00000513511 IFT57Q9NWB7 429 aa18.1■□□□□ 0.49
ABCC3-212ENST00000513511 ZNF853P0CG23 659 aa18.09■□□□□ 0.49
ABCC3-212ENST00000513511 NPR1P16066 1061 aa18.09■□□□□ 0.49
ABCC3-212ENST00000513511 KRT24Q2M2I5 525 aa18.09■□□□□ 0.49
ABCC3-212ENST00000513511 MBIPQ9NS73 344 aa18.09■□□□□ 0.49
ABCC3-212ENST00000513511 NUP98P52948 1817 aa18.09■□□□□ 0.49
ABCC3-212ENST00000513511 RGL2O15211 777 aa18.08■□□□□ 0.48
ABCC3-212ENST00000513511 HTRA3P83110 453 aa18.08■□□□□ 0.48
ABCC3-212ENST00000513511 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
ABCC3-212ENST00000513511 SOGA3Q5TF21 947 aa18.08■□□□□ 0.48
ABCC3-212ENST00000513511 DPY19L2Q6NUT2 758 aa18.08■□□□□ 0.48
ABCC3-212ENST00000513511 NECTIN2Q92692 538 aa18.08■□□□□ 0.48
ABCC3-212ENST00000513511 ABCC12Q96J65 1359 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 WDR90Q96KV7 1748 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 ERVV-1B6SEH8 477 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 ANXA1P04083 346 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 VEGFAP15692 232 aaPredicted RBP18.07■□□□□ 0.48
ABCC3-212ENST00000513511 GNAI1P63096 354 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 FSTL1Q12841 308 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 CCDC93Q567U6 631 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 OLFM4Q6UX06 510 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 NYXQ9GZU5 481 aa18.07■□□□□ 0.48
ABCC3-212ENST00000513511 DICER1Q9UPY3 1922 aaKnown RBP18.06■□□□□ 0.48
ABCC3-212ENST00000513511 SMC1BQ8NDV3 1235 aa18.06■□□□□ 0.48
ABCC3-212ENST00000513511 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
ABCC3-212ENST00000513511 LTBP3Q9NS15 1303 aa18.05■□□□□ 0.48
ABCC3-212ENST00000513511 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
ABCC3-212ENST00000513511 KLRG2A4D1S0 409 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms