RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MTHFSDQ2M296 383 aaKnown RBP18.89■□□□□ 0.61
SPCS3-204ENST00000513139 L3MBTL3Q96JM7 780 aaPredicted RBP18.89■□□□□ 0.61
SPCS3-204ENST00000513139 HMOX1P09601 288 aa18.88■□□□□ 0.61
SPCS3-204ENST00000513139 IL6STP40189 918 aaPredicted RBP18.88■□□□□ 0.61
SPCS3-204ENST00000513139 CTCFP49711 727 aaPredicted RBP18.88■□□□□ 0.61
SPCS3-204ENST00000513139 SRGNP10124 158 aa18.87■□□□□ 0.61
SPCS3-204ENST00000513139 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
SPCS3-204ENST00000513139 CNBD1Q8NA66 436 aa18.87■□□□□ 0.61
SPCS3-204ENST00000513139 AIDAQ96BJ3 306 aa18.87■□□□□ 0.61
SPCS3-204ENST00000513139 SETDB2Q96T68 719 aa18.87■□□□□ 0.61
SPCS3-204ENST00000513139 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
SPCS3-204ENST00000513139 TMEM88BA6NKF7 163 aa18.86■□□□□ 0.61
SPCS3-204ENST00000513139 MASTLQ96GX5 879 aa18.86■□□□□ 0.61
SPCS3-204ENST00000513139 ZNF496Q96IT1 587 aaPredicted RBP18.86■□□□□ 0.61
SPCS3-204ENST00000513139 TAF1DQ9H5J8 278 aaPredicted RBP18.86■□□□□ 0.61
SPCS3-204ENST00000513139 TBC1D2BQ9UPU7 963 aa18.86■□□□□ 0.61
SPCS3-204ENST00000513139 ADAMTSL1Q8N6G6 1762 aa18.86■□□□□ 0.61
SPCS3-204ENST00000513139 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
SPCS3-204ENST00000513139 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
SPCS3-204ENST00000513139 ST5P78524 1137 aa18.85■□□□□ 0.61
SPCS3-204ENST00000513139 ZNF790Q6PG37 636 aa18.85■□□□□ 0.61
SPCS3-204ENST00000513139 CCDC24Q8N4L8 307 aa18.85■□□□□ 0.61
SPCS3-204ENST00000513139 NPHP1O15259 732 aa18.84■□□□□ 0.61
SPCS3-204ENST00000513139 ITGBL1O95965 494 aaPredicted RBP18.84■□□□□ 0.61
SPCS3-204ENST00000513139 VEGFBP49765 207 aa18.84■□□□□ 0.61
SPCS3-204ENST00000513139 AMER1Q5JTC6 1135 aaPredicted RBP18.84■□□□□ 0.61
SPCS3-204ENST00000513139 NPM2Q86SE8 214 aaKnown RBP18.84■□□□□ 0.61
SPCS3-204ENST00000513139 WBP1LQ9NX94 342 aa18.84■□□□□ 0.61
SPCS3-204ENST00000513139 CAMTA2O94983 1202 aa18.83■□□□□ 0.6
SPCS3-204ENST00000513139 TEFQ10587 303 aa18.83■□□□□ 0.6
SPCS3-204ENST00000513139 C7orf43Q8WVR3 580 aa18.83■□□□□ 0.6
SPCS3-204ENST00000513139 ZNF330Q9Y3S2 320 aaPredicted RBP18.83■□□□□ 0.6
SPCS3-204ENST00000513139 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
SPCS3-204ENST00000513139 CCDC93Q567U6 631 aa18.81■□□□□ 0.6
SPCS3-204ENST00000513139 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
SPCS3-204ENST00000513139 RASSF10A6NK89 507 aa18.8■□□□□ 0.6
SPCS3-204ENST00000513139 GNAT3A8MTJ3 354 aa18.8■□□□□ 0.6
SPCS3-204ENST00000513139 CLEC4GQ6UXB4 293 aa18.8■□□□□ 0.6
SPCS3-204ENST00000513139 PNMA8AQ86V59 439 aaPredicted RBP18.8■□□□□ 0.6
SPCS3-204ENST00000513139 IL17REQ8NFR9 667 aa18.8■□□□□ 0.6
SPCS3-204ENST00000513139 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
SPCS3-204ENST00000513139 KLRG2A4D1S0 409 aaPredicted RBP18.79■□□□□ 0.6
SPCS3-204ENST00000513139 SLC34A2O95436 690 aa18.79■□□□□ 0.6
SPCS3-204ENST00000513139 A1BGP04217 495 aa18.79■□□□□ 0.6
SPCS3-204ENST00000513139 NPR1P16066 1061 aa18.79■□□□□ 0.6
SPCS3-204ENST00000513139 LBX1P52954 281 aa18.79■□□□□ 0.6
SPCS3-204ENST00000513139 FKBP4Q02790 459 aaKnown RBP eCLIP18.79■□□□□ 0.6
SPCS3-204ENST00000513139 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
SPCS3-204ENST00000513139 EAPPQ56P03 285 aaPredicted RBP18.78■□□□□ 0.6
SPCS3-204ENST00000513139 DZIP3Q86Y13 1208 aaKnown RBP18.78■□□□□ 0.6
SPCS3-204ENST00000513139 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
SPCS3-204ENST00000513139 RGL2O15211 777 aa18.77■□□□□ 0.6
SPCS3-204ENST00000513139 EPHX2P34913 555 aa18.77■□□□□ 0.6
SPCS3-204ENST00000513139 MAP2K1Q02750 393 aaPredicted RBP18.77■□□□□ 0.6
SPCS3-204ENST00000513139 DEFB115Q30KQ5 88 aa18.77■□□□□ 0.6
SPCS3-204ENST00000513139 NBPF5PQ86XG9 351 aaPredicted RBP18.77■□□□□ 0.6
SPCS3-204ENST00000513139 RTKN2Q8IZC4 609 aa18.77■□□□□ 0.6
SPCS3-204ENST00000513139 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
SPCS3-204ENST00000513139 TRPM7Q96QT4 1865 aa18.77■□□□□ 0.6
SPCS3-204ENST00000513139 ZNF541Q9H0D2 1346 aa18.76■□□□□ 0.59
SPCS3-204ENST00000513139 CNTROBQ8N137 903 aa18.76■□□□□ 0.59
SPCS3-204ENST00000513139 CLEC11AQ9Y240 323 aa18.76■□□□□ 0.59
SPCS3-204ENST00000513139 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
SPCS3-204ENST00000513139 FZD9O00144 591 aa18.75■□□□□ 0.59
SPCS3-204ENST00000513139 HSPA8P11142 646 aaKnown RBP18.75■□□□□ 0.59
SPCS3-204ENST00000513139 ABHD8Q96I13 439 aa18.75■□□□□ 0.59
SPCS3-204ENST00000513139 ZNF277Q9NRM2 450 aaPredicted RBP18.75■□□□□ 0.59
SPCS3-204ENST00000513139 WDR33Q9C0J8 1336 aaKnown RBP18.74■□□□□ 0.59
SPCS3-204ENST00000513139 THSD7BQ9C0I4 1608 aa18.74■□□□□ 0.59
SPCS3-204ENST00000513139 COL3A1P02461 1466 aaPredicted RBP18.74■□□□□ 0.59
SPCS3-204ENST00000513139 TPTE2Q6XPS3 522 aa18.74■□□□□ 0.59
SPCS3-204ENST00000513139 GPC2Q8N158 579 aa18.74■□□□□ 0.59
SPCS3-204ENST00000513139 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
SPCS3-204ENST00000513139 IARSP41252 1262 aaKnown RBP18.73■□□□□ 0.59
SPCS3-204ENST00000513139 BTBD11A6QL63 1104 aa18.72■□□□□ 0.59
SPCS3-204ENST00000513139 MAP1SQ66K74 1059 aaPredicted RBP18.72■□□□□ 0.59
SPCS3-204ENST00000513139 USP16Q9Y5T5 823 aa18.72■□□□□ 0.59
SPCS3-204ENST00000513139 RNF123Q5XPI4 1314 aa18.72■□□□□ 0.59
SPCS3-204ENST00000513139 PER1O15534 1290 aaPredicted RBP18.71■□□□□ 0.59
SPCS3-204ENST00000513139 PSMD1Q99460 953 aa18.71■□□□□ 0.59
SPCS3-204ENST00000513139 SYNE4Q8N205 404 aa18.7■□□□□ 0.58
SPCS3-204ENST00000513139 JDP2Q8WYK2 163 aa18.7■□□□□ 0.58
SPCS3-204ENST00000513139 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
SPCS3-204ENST00000513139 DDX21Q9NR30 783 aaKnown RBP eCLIP18.7■□□□□ 0.58
SPCS3-204ENST00000513139 ABT1Q9ULW3 272 aaKnown RBP18.7■□□□□ 0.58
SPCS3-204ENST00000513139 SNED1Q8TER0 1413 aa18.69■□□□□ 0.58
SPCS3-204ENST00000513139 U2SURPO15042 1029 aaKnown RBP18.69■□□□□ 0.58
SPCS3-204ENST00000513139 KCNQ3O43525 872 aa18.69■□□□□ 0.58
SPCS3-204ENST00000513139 FAM161AQ3B820 660 aa18.69■□□□□ 0.58
SPCS3-204ENST00000513139 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
SPCS3-204ENST00000513139 NIP7Q9Y221 180 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPCS3-204ENST00000513139 NUP98P52948 1817 aa18.69■□□□□ 0.58
SPCS3-204ENST00000513139 SNRPA1P09661 255 aaKnown RBP18.68■□□□□ 0.58
SPCS3-204ENST00000513139 CC2D2BQ6DHV5 1058 aa18.68■□□□□ 0.58
SPCS3-204ENST00000513139 LTBP1Q14766 1721 aa18.68■□□□□ 0.58
SPCS3-204ENST00000513139 ECE1P42892 770 aa18.67■□□□□ 0.58
SPCS3-204ENST00000513139 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
SPCS3-204ENST00000513139 RGS19P49795 217 aa18.67■□□□□ 0.58
SPCS3-204ENST00000513139 GRIPAP1Q4V328 841 aa18.67■□□□□ 0.58
SPCS3-204ENST00000513139 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms