RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-231ENST00000513098 PRELPP51888 382 aa16.57■□□□□ 0.24
UBE2D3-231ENST00000513098 DDX10Q13206 875 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-231ENST00000513098 TPTE2Q6XPS3 522 aa16.57■□□□□ 0.24
UBE2D3-231ENST00000513098 CNKSR1Q969H4 720 aa16.57■□□□□ 0.24
UBE2D3-231ENST00000513098 ZNF622Q969S3 477 aaKnown RBP eCLIP16.57■□□□□ 0.24
UBE2D3-231ENST00000513098 NFKBIEO00221 500 aa16.56■□□□□ 0.24
UBE2D3-231ENST00000513098 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
UBE2D3-231ENST00000513098 RBM46Q8TBY0 533 aaKnown RBP16.56■□□□□ 0.24
UBE2D3-231ENST00000513098 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
UBE2D3-231ENST00000513098 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
UBE2D3-231ENST00000513098 MYBBP1AQ9BQG0 1328 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-231ENST00000513098 RIPK4P57078 832 aa16.55■□□□□ 0.24
UBE2D3-231ENST00000513098 RASSF7Q02833 373 aa16.55■□□□□ 0.24
UBE2D3-231ENST00000513098 CCDC24Q8N4L8 307 aa16.55■□□□□ 0.24
UBE2D3-231ENST00000513098 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-231ENST00000513098 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
UBE2D3-231ENST00000513098 LTBP3Q9NS15 1303 aa16.54■□□□□ 0.24
UBE2D3-231ENST00000513098 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
UBE2D3-231ENST00000513098 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-231ENST00000513098 HLFQ16534 295 aa16.54■□□□□ 0.24
UBE2D3-231ENST00000513098 NIP7Q9Y221 180 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBE2D3-231ENST00000513098 NPHP1O15259 732 aa16.53■□□□□ 0.24
UBE2D3-231ENST00000513098 C21orf2O43822 256 aa16.53■□□□□ 0.24
UBE2D3-231ENST00000513098 APLP1P51693 650 aa16.53■□□□□ 0.24
UBE2D3-231ENST00000513098 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
UBE2D3-231ENST00000513098 C7orf43Q8WVR3 580 aa16.53■□□□□ 0.24
UBE2D3-231ENST00000513098 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.24
UBE2D3-231ENST00000513098 NPR1P16066 1061 aa16.52■□□□□ 0.24
UBE2D3-231ENST00000513098 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.24
UBE2D3-231ENST00000513098 FSTL1Q12841 308 aa16.52■□□□□ 0.24
UBE2D3-231ENST00000513098 RRAGCQ9HB90 399 aa16.52■□□□□ 0.24
UBE2D3-231ENST00000513098 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
UBE2D3-231ENST00000513098 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
UBE2D3-231ENST00000513098 COL11A2P13942 1736 aaPredicted RBP16.51■□□□□ 0.23
UBE2D3-231ENST00000513098 CCDC88AQ3V6T2 1871 aa16.51■□□□□ 0.23
UBE2D3-231ENST00000513098 PRPF40BQ6NWY9 871 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-231ENST00000513098 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
UBE2D3-231ENST00000513098 SLX4Q8IY92 1834 aa16.51■□□□□ 0.23
UBE2D3-231ENST00000513098 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
UBE2D3-231ENST00000513098 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
UBE2D3-231ENST00000513098 NYXQ9GZU5 481 aa16.5■□□□□ 0.23
UBE2D3-231ENST00000513098 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-231ENST00000513098 CHL1O00533 1208 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 VEGFAP15692 232 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 PDIA6Q15084 440 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 CRY2Q49AN0 593 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 DPY19L2Q6NUT2 758 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 TTLL7Q6ZT98 887 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 DNAJC5GQ8N7S2 189 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 RUNDC1Q96C34 613 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 TAOK3Q9H2K8 898 aa16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 DICER1Q9UPY3 1922 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-231ENST00000513098 NUP98P52948 1817 aa16.48■□□□□ 0.23
UBE2D3-231ENST00000513098 ALDH1B1P30837 517 aa16.48■□□□□ 0.23
UBE2D3-231ENST00000513098 ZNF34Q8IZ26 560 aa16.48■□□□□ 0.23
UBE2D3-231ENST00000513098 TNRC6CQ9HCJ0 1690 aaKnown RBP16.48■□□□□ 0.23
UBE2D3-231ENST00000513098 ARFGEF2Q9Y6D5 1785 aa16.48■□□□□ 0.23
UBE2D3-231ENST00000513098 IBTKQ9P2D0 1353 aaPredicted RBP16.48■□□□□ 0.23
UBE2D3-231ENST00000513098 POTECB2RU33 542 aa16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 MYL6BP14649 208 aa16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 ERFEQ4G0M1 354 aa16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
UBE2D3-231ENST00000513098 GTF2E1P29083 439 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-231ENST00000513098 HOXA10P31260 410 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-231ENST00000513098 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-231ENST00000513098 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
UBE2D3-231ENST00000513098 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBE2D3-231ENST00000513098 CCDC93Q567U6 631 aa16.45■□□□□ 0.22
UBE2D3-231ENST00000513098 RTKN2Q8IZC4 609 aa16.45■□□□□ 0.22
UBE2D3-231ENST00000513098 SMC1BQ8NDV3 1235 aa16.45■□□□□ 0.22
UBE2D3-231ENST00000513098 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
UBE2D3-231ENST00000513098 PARP10Q53GL7 1025 aa16.44■□□□□ 0.22
UBE2D3-231ENST00000513098 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
UBE2D3-231ENST00000513098 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
UBE2D3-231ENST00000513098 ZBTB3Q9H5J0 574 aa16.44■□□□□ 0.22
UBE2D3-231ENST00000513098 PCNTO95613 3336 aa16.44■□□□□ 0.22
UBE2D3-231ENST00000513098 WDR90Q96KV7 1748 aa16.43■□□□□ 0.22
UBE2D3-231ENST00000513098 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
UBE2D3-231ENST00000513098 EIF2S2P20042 333 aaKnown RBP16.43■□□□□ 0.22
UBE2D3-231ENST00000513098 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBE2D3-231ENST00000513098 GRIPAP1Q4V328 841 aa16.43■□□□□ 0.22
UBE2D3-231ENST00000513098 CC2D2BQ6DHV5 1058 aa16.43■□□□□ 0.22
UBE2D3-231ENST00000513098 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
UBE2D3-231ENST00000513098 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
UBE2D3-231ENST00000513098 NTSR2O95665 410 aa16.42■□□□□ 0.22
UBE2D3-231ENST00000513098 HOXB7P09629 217 aa16.42■□□□□ 0.22
UBE2D3-231ENST00000513098 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
UBE2D3-231ENST00000513098 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
UBE2D3-231ENST00000513098 NUTM1Q86Y26 1132 aa16.42■□□□□ 0.22
UBE2D3-231ENST00000513098 ABCC12Q96J65 1359 aa16.41■□□□□ 0.22
UBE2D3-231ENST00000513098 GPTP24298 496 aa16.41■□□□□ 0.22
UBE2D3-231ENST00000513098 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
UBE2D3-231ENST00000513098 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
UBE2D3-231ENST00000513098 CRAMP1Q96RY5 1269 aa16.41■□□□□ 0.22
UBE2D3-231ENST00000513098 PSMD1Q99460 953 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms