RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ERLIN2O94905 339 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 CEBPZQ03701 1054 aaKnown RBP12.7□□□□□ -0.38
CPNE4-209ENST00000512055 TRIM29Q14134 588 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 CEP85Q6P2H3 762 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 METP08581 1390 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 BLOC1S2Q6QNY1 142 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 TRMT2AQ8IZ69 625 aaKnown RBP12.7□□□□□ -0.38
CPNE4-209ENST00000512055 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-209ENST00000512055 CFAP45Q9UL16 551 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
CPNE4-209ENST00000512055 TMEM2Q9UHN6 1383 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 TRPM1Q7Z4N2 1603 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 ESPNB1AK53 854 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 SMC2O95347 1197 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 PDE1AP54750 535 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 TMCO3Q6UWJ1 677 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 GRPEL1Q9HAV7 217 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
CPNE4-209ENST00000512055 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 CLTCL1P53675 1640 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 A0A087WZG4 1122 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 CCP110O43303 1012 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 GCP02774 474 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 IFNL2Q8IZJ0 200 aa12.69□□□□□ -0.38
CPNE4-209ENST00000512055 FAM177A1Q8N128 213 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-209ENST00000512055 TRIM34Q9BYJ4 488 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
CPNE4-209ENST00000512055 KIF1BO60333 1816 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 RNF187Q5TA31 235 aaPredicted RBP12.68□□□□□ -0.38
CPNE4-209ENST00000512055 LARP1BQ659C4 914 aaKnown RBP12.68□□□□□ -0.38
CPNE4-209ENST00000512055 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 FMNL2Q96PY5 1086 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 PLEKHF1Q96S99 279 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 NAT10Q9H0A0 1025 aaKnown RBP12.68□□□□□ -0.38
CPNE4-209ENST00000512055 PDCP20941 246 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
CPNE4-209ENST00000512055 TET3O43151 1660 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 GBP2P32456 591 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-209ENST00000512055 UBE3BQ7Z3V4 1068 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-209ENST00000512055 UNC13BO14795 1591 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 CHL1O00533 1208 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
CPNE4-209ENST00000512055 PAIP2Q9BPZ3 127 aaKnown RBP12.67□□□□□ -0.38
CPNE4-209ENST00000512055 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 TMOD3Q9NYL9 352 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 AKAP4Q5JQC9 854 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 PLEKHM2Q8IWE5 1019 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 CCDC83Q8IWF9 413 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 CFAP74Q9C0B2 1584 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 SEPT6Q14141 434 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 TIGD1Q96MW7 591 aa12.67□□□□□ -0.38
CPNE4-209ENST00000512055 MSH6P52701 1360 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 ATP8B2P98198 1209 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 ECHDC1Q9NTX5 307 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 ERICH2A1L162 156 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 POLR3GO15318 223 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-209ENST00000512055 MICALCLQ6ZW33 695 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 HECW2Q9P2P5 1572 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 MAP2K1Q02750 393 aaPredicted RBP12.66□□□□□ -0.38
CPNE4-209ENST00000512055 OLFM4Q6UX06 510 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 FERMT3Q86UX7 667 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 SDF4Q9BRK5 362 aa12.66□□□□□ -0.38
CPNE4-209ENST00000512055 EFCAB6Q5THR3 1501 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 COPS6Q7L5N1 327 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 TSPY26PQ9H489 355 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 PLEKHG3A1L390 1219 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 IP6K1Q92551 441 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 ABCC3O15438 1527 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 ANKRD1Q15327 319 aa12.65□□□□□ -0.38
CPNE4-209ENST00000512055 PA2G4Q9UQ80 394 aaKnown RBP12.65□□□□□ -0.38
CPNE4-209ENST00000512055 STARD3NLO95772 234 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 CWF19L2Q2TBE0 894 aaKnown RBP12.64□□□□□ -0.39
CPNE4-209ENST00000512055 CCDC181Q5TID7 509 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 TSPOAP1O95153 1857 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 HSPA2P54652 639 aa12.64□□□□□ -0.39
CPNE4-209ENST00000512055 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
CPNE4-209ENST00000512055 BRPF1P55201 1214 aaPredicted RBP12.63□□□□□ -0.39
CPNE4-209ENST00000512055 UBXN4Q92575 508 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 SARNPP82979 210 aaKnown RBP12.63□□□□□ -0.39
CPNE4-209ENST00000512055 ADAMTS2O95450 1211 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 GPTP24298 496 aa12.63□□□□□ -0.39
CPNE4-209ENST00000512055 SUDS3Q9H7L9 328 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms