RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 HSP90AB2PQ58FF8 381 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 RUFY1Q96T51 708 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 MADDQ8WXG6 1647 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 WASLO00401 505 aaPredicted RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 EIF3JO75822 258 aaKnown RBP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 GTF2F1P35269 517 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTPN13-209ENST00000511467 SYCP1Q15431 976 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 PPP1R42Q7Z4L9 355 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 ZNF710Q8N1W2 664 aa5.79□□□□□ -1.48
PTPN13-209ENST00000511467 KRT85P78386 507 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 CDK19Q9BWU1 502 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 CCDC192P0DO97 292 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 CAVIN4Q5BKX8 364 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 RNF216Q9NWF9 866 aaPredicted RBP5.78□□□□□ -1.48
PTPN13-209ENST00000511467 USP25Q9UHP3 1055 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 NWD1Q149M9 1564 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 RAD50Q92878 1312 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 MPHOSPH8Q99549 860 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 TUBB2AQ13885 445 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 TUBB2BQ9BVA1 445 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPN13-209ENST00000511467 TNNQ9UQP3 1299 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 SSH2Q76I76 1423 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 UQCRFS1P1P0C7P4 283 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 RGS3P49796 1198 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 CYP46A1Q9Y6A2 500 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 LRRC7Q96NW7 1537 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 SPEF2Q9C093 1822 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 SOGA3Q5TF21 947 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 GIGYF2Q6Y7W6 1299 aaKnown RBP5.78□□□□□ -1.48
PTPN13-209ENST00000511467 LZTS2Q9BRK4 669 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 SLKQ9H2G2 1235 aaPredicted RBP5.78□□□□□ -1.48
PTPN13-209ENST00000511467 TTC41PQ6P2S7 1318 aa5.78□□□□□ -1.48
PTPN13-209ENST00000511467 PARP4Q9UKK3 1724 aaKnown RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CALM1P0DP23 149 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CALM2P0DP24 149 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CALM3P0DP25 149 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 SNX16P57768 344 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 ANKRD45Q5TZF3 282 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CDK5RAP3Q96JB5 506 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 DKC1O60832 514 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 MTHFSP49914 203 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 MVPQ14764 893 aaKnown RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 NEUROD2Q15784 382 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 NGLY1Q96IV0 654 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 OVOS2A0A0G2JMS6 1433 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 ERLIN1O75477 346 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 MAP4K4O95819 1239 aaPredicted RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 GABPB2Q8TAK5 448 aaPredicted RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 TPCN1Q9ULQ1 816 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 AATKQ6ZMQ8 1374 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 IFIT1P09914 478 aaKnown RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 GSDMDP57764 484 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CABP4P57796 275 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CALR3Q96L12 384 aaKnown RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 PLCD4Q9BRC7 762 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 ATP10DQ9P241 1426 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CROCCQ5TZA2 2017 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 ALDH1L1O75891 902 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 PPP1R2P3Q6NXS1 205 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 SLC17A8Q8NDX2 589 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 MNS1Q8NEH6 495 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 SH2D4AQ9H788 454 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 PHLPP2Q6ZVD8 1323 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 MON2Q7Z3U7 1717 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 PPP2R1AP30153 589 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 HOMEZQ8IX15 550 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 CEP126Q9P2H0 1117 aa5.77□□□□□ -1.49
PTPN13-209ENST00000511467 YTHDC2Q9H6S0 1430 aaKnown RBP5.77□□□□□ -1.49
PTPN13-209ENST00000511467 GOLGA6L10A6NI86 522 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 HDGFL1Q5TGJ6 251 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 IQCA1Q86XH1 822 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 BAZ2BQ9UIF8 2168 aaKnown RBP5.76□□□□□ -1.49
PTPN13-209ENST00000511467 PTPRTO14522 1441 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 CALML3P27482 149 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 PDE6BP35913 854 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 MAP3K12Q12852 859 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 TSPYL1Q9H0U9 437 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 TAOK3Q9H2K8 898 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 CCDC9Q9Y3X0 531 aaKnown RBP5.76□□□□□ -1.49
PTPN13-209ENST00000511467 GOLGA6L10A0A0M3HER8 536 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 SEC63Q9UGP8 760 aaKnown RBP5.76□□□□□ -1.49
PTPN13-209ENST00000511467 CCDC66A2RUB6 948 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 C19orf44Q9H6X5 657 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 PRDM11Q9NQV5 511 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 MINK1Q8N4C8 1332 aaPredicted RBP5.76□□□□□ -1.49
PTPN13-209ENST00000511467 KIAA0232Q92628 1395 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 ABCC6O95255 1503 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 TMEM266Q2M3C6 531 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 BICDL1Q6ZP65 573 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 CROCCP2Q86T23 111 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.76□□□□□ -1.49
PTPN13-209ENST00000511467 RGS22Q8NE09 1264 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 RMND1Q9NWS8 449 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 ZPR1O75312 459 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 EZRP15311 586 aaKnown RBP5.76□□□□□ -1.49
PTPN13-209ENST00000511467 NFXL1Q6ZNB6 911 aa5.76□□□□□ -1.49
PTPN13-209ENST00000511467 FMNL2Q96PY5 1086 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms