RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 MIS18AQ9NYP9 233 aa17.4■□□□□ 0.38
SNCAIP-214ENST00000510003 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 PLCB2Q00722 1185 aa17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 DNM1Q05193 864 aaKnown RBP17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 MAP3K11Q16584 847 aa17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 TXNDC2Q86VQ3 553 aa17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 RASEFQ8IZ41 740 aa17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 METP08581 1390 aa17.39■□□□□ 0.37
SNCAIP-214ENST00000510003 SMTNL1A8MU46 457 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 HSP90AB4PQ58FF6 505 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 OGFRQ9NZT2 677 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 TTC41PQ6P2S7 1318 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 KRT85P78386 507 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 TAF3Q5VWG9 929 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 PRR36Q9H6K5 1346 aa17.38■□□□□ 0.37
SNCAIP-214ENST00000510003 FMN2Q9NZ56 1722 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 NUP62CLQ9H1M0 184 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 IL1RAPL2Q9NP60 686 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 PDRG1Q9NUG6 133 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 PAXBP1Q9Y5B6 917 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 ADGRL3Q9HAR2 1447 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 PLEKHG3A1L390 1219 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 ANKLE2Q86XL3 938 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 EID1Q9Y6B2 187 aa17.37■□□□□ 0.37
SNCAIP-214ENST00000510003 NCKAP5LQ9HCH0 1330 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 USP6P35125 1406 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 SURF6O75683 361 aaKnown RBP17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 PDCP20941 246 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 TYRO3Q06418 890 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 CYP46A1Q9Y6A2 500 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 SBNO1A3KN83 1393 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 ARHGAP23Q9P227 1491 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 SLIT1O75093 1534 aa17.36■□□□□ 0.37
SNCAIP-214ENST00000510003 GLRX3O76003 335 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 CAVIN2O95810 425 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 RBM43Q6ZSC3 357 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 CCDC83Q8IWF9 413 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 CGNQ9P2M7 1197 aaKnown RBP17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 FLT4P35916 1363 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 FOXO3O43524 673 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 GABPB1Q06547 395 aaPredicted RBP17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 PPP1R42Q7Z4L9 355 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
SNCAIP-214ENST00000510003 LARGE1O95461 756 aa17.34■□□□□ 0.37
SNCAIP-214ENST00000510003 PTGS1P23219 599 aa17.34■□□□□ 0.37
SNCAIP-214ENST00000510003 NCBP1Q09161 790 aaKnown RBP17.34■□□□□ 0.37
SNCAIP-214ENST00000510003 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.37
SNCAIP-214ENST00000510003 U2AF2P26368 475 aaKnown RBP eCLIP17.33■□□□□ 0.37
SNCAIP-214ENST00000510003 PLA2G4DQ86XP0 818 aa17.33■□□□□ 0.37
SNCAIP-214ENST00000510003 TDRD7Q8NHU6 1098 aaKnown RBP17.33■□□□□ 0.37
SNCAIP-214ENST00000510003 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.37
SNCAIP-214ENST00000510003 ACEP12821 1306 aa17.33■□□□□ 0.36
SNCAIP-214ENST00000510003 CDC25BP30305 580 aa17.33■□□□□ 0.36
SNCAIP-214ENST00000510003 JAKMIP1Q96N16 626 aaKnown RBP17.33■□□□□ 0.36
SNCAIP-214ENST00000510003 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
SNCAIP-214ENST00000510003 TTC6Q86TZ1 520 aa17.32■□□□□ 0.36
SNCAIP-214ENST00000510003 CHMP4AQ9BY43 222 aa17.32■□□□□ 0.36
SNCAIP-214ENST00000510003 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
SNCAIP-214ENST00000510003 NPHP3Q7Z494 1330 aa17.32■□□□□ 0.36
SNCAIP-214ENST00000510003 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 SPDYE4A6NLX3 237 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 MAP4K4O95819 1239 aaPredicted RBP17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 ZKSCAN1P17029 563 aaPredicted RBP17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 ZNF75DP51815 510 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 CCDC186Q7Z3E2 898 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 ALDH8A1Q9H2A2 487 aaPredicted RBP17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 TNMDQ9H2S6 317 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 ANKRD1Q15327 319 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 CBX8Q9HC52 389 aa17.31■□□□□ 0.36
SNCAIP-214ENST00000510003 SRGAP3O43295 1099 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 NEMFO60524 1076 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 PSMA5P28066 241 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 ST3GAL1Q11201 340 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 NECTIN1Q15223 517 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 CLSTN2Q9H4D0 955 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 TNNT1P13805 278 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 ME3Q16798 604 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 CCDC112Q8NEF3 446 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 DDX41Q9UJV9 622 aaKnown RBP17.3■□□□□ 0.36
SNCAIP-214ENST00000510003 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms