RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TTC22Q5TAA0 569 aa13.5□□□□□ -0.25
SH3RF1-203ENST00000508685 PPP1R42Q7Z4L9 355 aa13.5□□□□□ -0.25
SH3RF1-203ENST00000508685 TNPO1Q92973 898 aaKnown RBP13.5□□□□□ -0.25
SH3RF1-203ENST00000508685 USP21Q9UK80 565 aa13.5□□□□□ -0.25
SH3RF1-203ENST00000508685 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
SH3RF1-203ENST00000508685 LRP10Q7Z4F1 713 aa13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 XAGE3Q8WTP9 111 aa13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 DDX58O95786 925 aaKnown RBP13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 NKX1-1Q15270 411 aaPredicted RBP13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 COPS6Q7L5N1 327 aa13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 SSH3Q8TE77 659 aa13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 QTRT2Q9H974 415 aaKnown RBP13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 ANO8Q9HCE9 1232 aaPredicted RBP13.49□□□□□ -0.25
SH3RF1-203ENST00000508685 COL14A1Q05707 1796 aaKnown RBP13.48□□□□□ -0.25
SH3RF1-203ENST00000508685 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
SH3RF1-203ENST00000508685 TSHZ3Q63HK5 1081 aa13.48□□□□□ -0.25
SH3RF1-203ENST00000508685 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
SH3RF1-203ENST00000508685 TOGARAM1Q9Y4F4 1720 aa13.48□□□□□ -0.25
SH3RF1-203ENST00000508685 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 KCPQ6ZWJ8 1503 aa13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 ALDH1L1O75891 902 aa13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 IGKV5-2P06315 115 aa13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 POLA2Q14181 598 aa13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
SH3RF1-203ENST00000508685 UBR2Q8IWV8 1755 aa13.46□□□□□ -0.25
SH3RF1-203ENST00000508685 RXRBP28702 533 aa13.46□□□□□ -0.25
SH3RF1-203ENST00000508685 PDE1AP54750 535 aa13.46□□□□□ -0.25
SH3RF1-203ENST00000508685 NUCB2P80303 420 aa13.46□□□□□ -0.25
SH3RF1-203ENST00000508685 GZF1Q9H116 711 aaPredicted RBP13.46□□□□□ -0.25
SH3RF1-203ENST00000508685 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
SH3RF1-203ENST00000508685 LAMB4A4D0S4 1761 aa13.46□□□□□ -0.25
SH3RF1-203ENST00000508685 PAPPAQ13219 1627 aa13.46□□□□□ -0.26
SH3RF1-203ENST00000508685 SALL3Q9BXA9 1300 aa13.46□□□□□ -0.26
SH3RF1-203ENST00000508685 SURF6O75683 361 aaKnown RBP13.46□□□□□ -0.26
SH3RF1-203ENST00000508685 SDSP20132 328 aa13.46□□□□□ -0.26
SH3RF1-203ENST00000508685 UNC5CLQ8IV45 518 aa13.46□□□□□ -0.26
SH3RF1-203ENST00000508685 CWC22Q9HCG8 908 aaKnown RBP13.46□□□□□ -0.26
SH3RF1-203ENST00000508685 IL1RAPL2Q9NP60 686 aa13.46□□□□□ -0.26
SH3RF1-203ENST00000508685 SLIT2O94813 1529 aa13.45□□□□□ -0.26
SH3RF1-203ENST00000508685 GRM8O00222 908 aa13.45□□□□□ -0.26
SH3RF1-203ENST00000508685 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
SH3RF1-203ENST00000508685 DISP2A7MBM2 1401 aa13.45□□□□□ -0.26
SH3RF1-203ENST00000508685 NBPF26B4DH59 902 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 NBPF10Q6P3W6 841 aaKnown RBP13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 ANKRD13DQ6ZTN6 518 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 NBPF15Q8N660 670 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 MYD88Q99836 296 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 NEURL1BA8MQ27 555 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 REC8O95072 547 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 MX1P20591 662 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 RBM6P78332 1123 aaKnown RBP13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 SUCLG2Q96I99 432 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 USP26Q9BXU7 913 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 TMOD3Q9NYL9 352 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
SH3RF1-203ENST00000508685 CLCN1P35523 988 aa13.43□□□□□ -0.26
SH3RF1-203ENST00000508685 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
SH3RF1-203ENST00000508685 MTX1Q13505 466 aa13.43□□□□□ -0.26
SH3RF1-203ENST00000508685 METTL22Q9BUU2 404 aaPredicted RBP13.43□□□□□ -0.26
SH3RF1-203ENST00000508685 UTYO14607 1347 aa13.43□□□□□ -0.26
SH3RF1-203ENST00000508685 ATRNO75882 1429 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 ST18O60284 1047 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 A1BGP04217 495 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 GCKRQ14397 625 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 BICC1Q9H694 974 aaKnown RBP13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 PLCH1Q4KWH8 1693 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 ARFGEF2Q9Y6D5 1785 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 RHPN1Q8TCX5 695 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 PIGBQ92521 554 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 PA2G4Q9UQ80 394 aaKnown RBP13.42□□□□□ -0.26
SH3RF1-203ENST00000508685 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
SH3RF1-203ENST00000508685 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
SH3RF1-203ENST00000508685 JARID2Q92833 1246 aaPredicted RBP13.41□□□□□ -0.26
SH3RF1-203ENST00000508685 RRAGDQ9NQL2 400 aaPredicted RBP13.41□□□□□ -0.26
SH3RF1-203ENST00000508685 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 KLHL40Q2TBA0 621 aa13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 VPS72Q15906 364 aa13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 TTLL7Q6ZT98 887 aa13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 KIF1BPQ96EK5 621 aa13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 NWD2Q9ULI1 1742 aa13.4□□□□□ -0.26
SH3RF1-203ENST00000508685 TUBGCP6Q96RT7 1819 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 SOCS7O14512 581 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 OS9Q13438 667 aaPredicted RBP13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 EPHA10Q5JZY3 1008 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 ERBB4Q15303 1308 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 BAG4O95429 457 aaKnown RBP13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 MCM2P49736 904 aa13.39□□□□□ -0.27
SH3RF1-203ENST00000508685 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms