RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 TTC39AQ5SRH9 613 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 VPS36Q86VN1 386 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 VPS37DQ86XT2 251 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 PCDHB15Q9Y5E8 787 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 NSD3Q9BZ95 1437 aa8.43□□□□□ -1.06
UBE2D3-224ENST00000508474 VGLL3A8MV65 326 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 NUTM1Q86Y26 1132 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC113Q9H0I3 377 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 NPHP3Q7Z494 1330 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 KIF5BP33176 963 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 MAP2K2P36507 400 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 HLTFQ14527 1009 aaKnown RBP eCLIP8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC114Q96M63 670 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 ZSWIM4Q9H7M6 989 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 TFIP11Q9UBB9 837 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 FSD2A1L4K1 749 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 SYT10Q6XYQ8 523 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 AFAP1L1Q8TED9 768 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 ATRIPQ8WXE1 791 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 DRC1Q96MC2 740 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 GAPVD1Q14C86 1478 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 DCAF8L1A6NGE4 600 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 LIG1P18858 919 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 AIMP1Q12904 312 aaKnown RBP8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC178Q5BJE1 867 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 FMNL3Q8IVF7 1028 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 DNAJC25Q9H1X3 360 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 TMX1Q9H3N1 280 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 DACT1Q9NYF0 836 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 TOP2BQ02880 1626 aa8.42□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC141Q6ZP82 1450 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 ARHGAP25P42331 645 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 FANCD2Q9BXW9 1451 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 PTPN23Q9H3S7 1636 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 EVCP57679 992 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 SPAG1Q07617 926 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 FAM114A1Q8IWE2 563 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 CPLX3Q8WVH0 158 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 STMN4Q9H169 189 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 PTPRGP23470 1445 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 PARD3Q8TEW0 1356 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 INPP5BP32019 993 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 CYLC1P35663 651 aaPredicted RBP8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 CETN2P41208 172 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 CACNA2D4Q7Z3S7 1137 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 KCNG4Q8TDN1 519 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 EVI5LQ96CN4 794 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 JADE2Q9NQC1 790 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 NSD2O96028 1365 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 INSRP06213 1382 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 G3V3G9 751 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 ATP6V1AP38606 617 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 DCAF8Q5TAQ9 597 aa8.41□□□□□ -1.06
UBE2D3-224ENST00000508474 RPGRIP1LQ68CZ1 1315 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 SDSP20132 328 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 NAA25Q14CX7 972 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 KLHL10Q6JEL2 608 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 WDR66Q8TBY9 1149 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 MRPS27Q92552 414 aaKnown RBP8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 RALGAPBQ86X10 1494 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC196A0A1B0GTZ2 297 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 IFI16Q16666 785 aaKnown RBP8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 CCDC129Q6ZRS4 1044 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 AOPEPQ8N6M6 819 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 DDX12PQ92771 950 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 TSG101Q99816 390 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 SIL1Q9H173 461 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 EFCC1Q9HA90 598 aa8.4□□□□□ -1.06
UBE2D3-224ENST00000508474 SETSIPP0DME0 302 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 CCDC155Q8N6L0 562 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 HYPKQ9NX55 129 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 BIN1O00499 593 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 PPP2R3AQ06190 1150 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 ZSCAN26Q16670 478 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 BANK1Q8NDB2 785 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 ESYT1Q9BSJ8 1104 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 GOPCQ9HD26 462 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.4□□□□□ -1.076e-7■■■■■ 62.1
UBE2D3-224ENST00000508474 IMPACTQ9P2X3 320 aa8.4□□□□□ -1.07
UBE2D3-224ENST00000508474 SEC24BO95487 1268 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 FAM177BA6PVY3 158 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 KRT83P78385 493 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 CCDC6Q16204 474 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 ATL3Q6DD88 541 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 SULT6B1Q6IMI4 303 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 TTC14Q96N46 770 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 SCLT1Q96NL6 688 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 PRDM2Q13029 1718 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 CLNS1AP54105 237 aaKnown RBP8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 ELF2Q15723 593 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 PLEKHO1Q53GL0 409 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 ZNF692Q9BU19 519 aaPredicted RBP8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 CEP83Q9Y592 693 aa8.39□□□□□ -1.07
UBE2D3-224ENST00000508474 DNM1Q05193 864 aaKnown RBP8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 FBF1Q8TES7 1133 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 SYKP43405 635 aa8.38□□□□□ -1.07
UBE2D3-224ENST00000508474 MPHOSPH8Q99549 860 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms