RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 IQSEC3Q9UPP2 1182 aaPredicted RBP11.37□□□□□ -0.59
NEK1-203ENST00000507142 IL16Q14005 1332 aa11.37□□□□□ -0.59
NEK1-203ENST00000507142 KDM4AO75164 1064 aa11.37□□□□□ -0.59
NEK1-203ENST00000507142 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 KRT24Q2M2I5 525 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 SPTY2D1Q68D10 685 aaPredicted RBP11.36□□□□□ -0.59
NEK1-203ENST00000507142 MCTP1Q6DN14 999 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
NEK1-203ENST00000507142 CCDC8Q9H0W5 538 aaPredicted RBP11.36□□□□□ -0.59
NEK1-203ENST00000507142 FER1L4A9Z1Z3 1794 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 ZMYM4Q5VZL5 1548 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 EAPPQ56P03 285 aaPredicted RBP11.36□□□□□ -0.59
NEK1-203ENST00000507142 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 CCDC34Q96HJ3 373 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 SH3TC1Q8TE82 1336 aa11.36□□□□□ -0.59
NEK1-203ENST00000507142 SF3A1Q15459 793 aaKnown RBP11.35□□□□□ -0.59
NEK1-203ENST00000507142 USPL1Q5W0Q7 1092 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 DPP8Q6V1X1 898 aaPredicted RBP11.35□□□□□ -0.59
NEK1-203ENST00000507142 FAM89AQ96GI7 184 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 ALDH1B1P30837 517 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 DDX21Q9NR30 783 aaKnown RBP eCLIP11.35□□□□□ -0.59
NEK1-203ENST00000507142 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
NEK1-203ENST00000507142 PLCB2Q00722 1185 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 NBR1Q14596 966 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 CLTCL1P53675 1640 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 UFL1O94874 794 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 KIDINS220Q9ULH0 1771 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.35□□□□□ -0.59
NEK1-203ENST00000507142 CRKLP46109 303 aaKnown RBP11.35□□□□□ -0.59
NEK1-203ENST00000507142 ANKRD2Q9GZV1 360 aa11.35□□□□□ -0.59
NEK1-203ENST00000507142 R3HDM1Q15032 1099 aaKnown RBP11.34□□□□□ -0.59
NEK1-203ENST00000507142 MKNK2Q9HBH9 465 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 NKTRP30414 1462 aaKnown RBP11.34□□□□□ -0.59
NEK1-203ENST00000507142 ATP7BP35670 1465 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 GRM8O00222 908 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 FEZ1Q99689 392 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■■■■□ 21.2
NEK1-203ENST00000507142 BAG3O95817 575 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 HELBQ8NG08 1087 aaPredicted RBP11.34□□□□□ -0.59
NEK1-203ENST00000507142 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 ZNF287Q9HBT7 754 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 MINDY4BA8MYZ0 360 aa11.34□□□□□ -0.59
NEK1-203ENST00000507142 MYCNP04198 464 aaPredicted RBP11.33□□□□□ -0.6
NEK1-203ENST00000507142 CWF19L2Q2TBE0 894 aaKnown RBP11.33□□□□□ -0.6
NEK1-203ENST00000507142 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 LMTK2Q8IWU2 1503 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 ALDH1L1O75891 902 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 SBNO2Q9Y2G9 1366 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 FOSBP53539 338 aa11.33□□□□□ -0.6
NEK1-203ENST00000507142 GSTO1P78417 241 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 LINS1Q8NG48 757 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 HLA-DOAP06340 250 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 PHAXQ9H814 394 aaKnown RBP11.32□□□□□ -0.6
NEK1-203ENST00000507142 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 CDC45O75419 566 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 SPON1Q9HCB6 807 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 ATP2B3Q16720 1220 aa11.32□□□□□ -0.6
NEK1-203ENST00000507142 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
NEK1-203ENST00000507142 FOXD4L4Q8WXT5 416 aaPredicted RBP11.32□□□□□ -0.6
NEK1-203ENST00000507142 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 UNC13BO14795 1591 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 CDC42BPGQ6DT37 1551 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 CNKSR1Q969H4 720 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 AXIN2Q9Y2T1 843 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 PSMA5P28066 241 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 SAFBQ15424 915 aaKnown RBP eCLIP11.31□□□□□ -0.6
NEK1-203ENST00000507142 SLC4A8Q2Y0W8 1093 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
NEK1-203ENST00000507142 JAG2Q9Y219 1238 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 PPRC1Q5VV67 1664 aaKnown RBP11.31□□□□□ -0.6
NEK1-203ENST00000507142 PALLDQ8WX93 1383 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 TXNRD1Q16881 649 aa11.31□□□□□ -0.6
NEK1-203ENST00000507142 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 XBP1P17861 261 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 BRMS1Q9HCU9 246 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 PTCH1Q13635 1447 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 ZNF444Q8N0Y2 327 aaPredicted RBP11.3□□□□□ -0.6
NEK1-203ENST00000507142 MPNDQ8N594 471 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 PIGBQ92521 554 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 BABAM1Q9NWV8 329 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 PER1O15534 1290 aaPredicted RBP11.3□□□□□ -0.6
NEK1-203ENST00000507142 PICALMQ13492 652 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 PARD3Q8TEW0 1356 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 PDZRN3Q9UPQ7 1066 aa11.3□□□□□ -0.6
NEK1-203ENST00000507142 KCNQ3O43525 872 aa11.29□□□□□ -0.6
NEK1-203ENST00000507142 SMARCA5O60264 1052 aaPredicted RBP11.29□□□□□ -0.6
NEK1-203ENST00000507142 PDE8AO60658 829 aa11.29□□□□□ -0.6
NEK1-203ENST00000507142 TSPYL6Q8N831 410 aa11.29□□□□□ -0.6
NEK1-203ENST00000507142 CTNNA3Q9UI47 895 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms