RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 SETDB2Q96T68 719 aa25.02■■□□□ 1.6
LMNA-221ENST00000506981 BRCA1P38398 1863 aaKnown RBP25.02■■□□□ 1.6
LMNA-221ENST00000506981 GPR162Q16538 588 aa25.01■■□□□ 1.59
LMNA-221ENST00000506981 TSR2Q969E8 191 aaKnown RBP25.01■■□□□ 1.59
LMNA-221ENST00000506981 CHMP4AQ9BY43 222 aa25.01■■□□□ 1.59
LMNA-221ENST00000506981 CACNA1FO60840 1977 aa25.01■■□□□ 1.59
LMNA-221ENST00000506981 NPHP1O15259 732 aa25■■□□□ 1.59
LMNA-221ENST00000506981 DDX21Q9NR30 783 aaKnown RBP eCLIP25■■□□□ 1.59
LMNA-221ENST00000506981 MAP3K15Q6ZN16 1313 aa25■■□□□ 1.59
LMNA-221ENST00000506981 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 ERVV-1B6SEH8 477 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 ANXA1P04083 346 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 TGFB2P61812 414 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 TTLL7Q6ZT98 887 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 MIER1Q8N108 512 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 ANKRD31Q8N7Z5 1873 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 CHPF2Q9P2E5 772 aa24.99■■□□□ 1.59
LMNA-221ENST00000506981 DLEC1Q9Y238 1755 aa24.98■■□□□ 1.59
LMNA-221ENST00000506981 ELL2O00472 640 aaPredicted RBP24.98■■□□□ 1.59
LMNA-221ENST00000506981 PDIA6Q15084 440 aa24.98■■□□□ 1.59
LMNA-221ENST00000506981 PROSER3Q2NL68 480 aa24.98■■□□□ 1.59
LMNA-221ENST00000506981 DBF4Q9UBU7 674 aaPredicted RBP24.98■■□□□ 1.59
LMNA-221ENST00000506981 ZBTB3Q9H5J0 574 aa24.97■■□□□ 1.59
LMNA-221ENST00000506981 C8orf58Q8NAV2 365 aa24.96■■□□□ 1.59
LMNA-221ENST00000506981 NIP7Q9Y221 180 aaKnown RBP eCLIP24.96■■□□□ 1.59
LMNA-221ENST00000506981 FANCIQ9NVI1 1328 aa24.95■■□□□ 1.58
LMNA-221ENST00000506981 AIMP1Q12904 312 aaKnown RBP24.95■■□□□ 1.58
LMNA-221ENST00000506981 HLFQ16534 295 aa24.95■■□□□ 1.58
LMNA-221ENST00000506981 CNBD1Q8NA66 436 aa24.95■■□□□ 1.58
LMNA-221ENST00000506981 MYH16Q9H6N6 1097 aa24.95■■□□□ 1.58
LMNA-221ENST00000506981 ARFGEF2Q9Y6D5 1785 aa24.95■■□□□ 1.58
LMNA-221ENST00000506981 ATP10DQ9P241 1426 aa24.95■■□□□ 1.58
LMNA-221ENST00000506981 ARFGEF1Q9Y6D6 1849 aa24.94■■□□□ 1.58
LMNA-221ENST00000506981 LRP10Q7Z4F1 713 aa24.94■■□□□ 1.58
LMNA-221ENST00000506981 NBPF5PQ86XG9 351 aaPredicted RBP24.94■■□□□ 1.58
LMNA-221ENST00000506981 XAGE3Q8WTP9 111 aa24.94■■□□□ 1.58
LMNA-221ENST00000506981 HYPKQ9NX55 129 aa24.94■■□□□ 1.58
LMNA-221ENST00000506981 ST5P78524 1137 aa24.93■■□□□ 1.58
LMNA-221ENST00000506981 GOLGA2Q08379 1002 aa24.93■■□□□ 1.58
LMNA-221ENST00000506981 CCDC30Q5VVM6 783 aa24.93■■□□□ 1.58
LMNA-221ENST00000506981 COPS6Q7L5N1 327 aa24.93■■□□□ 1.58
LMNA-221ENST00000506981 CACNA1SQ13698 1873 aa24.93■■□□□ 1.58
LMNA-221ENST00000506981 A0A0G2JLW4 131 aa24.92■■□□□ 1.58
LMNA-221ENST00000506981 DPEP1P16444 411 aa24.92■■□□□ 1.58
LMNA-221ENST00000506981 TWISTNBQ3B726 338 aaPredicted RBP24.92■■□□□ 1.58
LMNA-221ENST00000506981 PRR5LQ6MZQ0 368 aa24.91■■□□□ 1.58
LMNA-221ENST00000506981 GIGYF2Q6Y7W6 1299 aaKnown RBP24.91■■□□□ 1.58
LMNA-221ENST00000506981 TSPYL6Q8N831 410 aa24.91■■□□□ 1.58
LMNA-221ENST00000506981 WWC3Q9ULE0 1092 aa24.91■■□□□ 1.58
LMNA-221ENST00000506981 COL11A2P13942 1736 aaPredicted RBP24.9■■□□□ 1.58
LMNA-221ENST00000506981 GRIN3BO60391 1043 aa24.9■■□□□ 1.58
LMNA-221ENST00000506981 HSP90AB3PQ58FF7 597 aa24.9■■□□□ 1.58
LMNA-221ENST00000506981 STK31Q9BXU1 1019 aa24.9■■□□□ 1.58
LMNA-221ENST00000506981 FAM177BA6PVY3 158 aa24.89■■□□□ 1.58
LMNA-221ENST00000506981 GTF2E1P29083 439 aaPredicted RBP24.89■■□□□ 1.58
LMNA-221ENST00000506981 TPTE2Q6XPS3 522 aa24.89■■□□□ 1.58
LMNA-221ENST00000506981 NYXQ9GZU5 481 aa24.89■■□□□ 1.58
LMNA-221ENST00000506981 ZNF521Q96K83 1311 aa24.88■■□□□ 1.57
LMNA-221ENST00000506981 YBX3P16989 372 aaKnown RBP eCLIP24.88■■□□□ 1.57
LMNA-221ENST00000506981 GPTP24298 496 aa24.88■■□□□ 1.57
LMNA-221ENST00000506981 PDE6BP35913 854 aa24.88■■□□□ 1.57
LMNA-221ENST00000506981 PDZRN3Q9UPQ7 1066 aa24.88■■□□□ 1.57
LMNA-221ENST00000506981 CHRNA5P30532 468 aa24.87■■□□□ 1.57
LMNA-221ENST00000506981 BRIP1Q9BX63 1249 aa24.87■■□□□ 1.57
LMNA-221ENST00000506981 PIM2Q9P1W9 311 aa24.87■■□□□ 1.57
LMNA-221ENST00000506981 H0YIN7 160 aa24.86■■□□□ 1.57
LMNA-221ENST00000506981 EXOSC9Q06265 439 aaKnown RBP24.86■■□□□ 1.57
LMNA-221ENST00000506981 PARP10Q53GL7 1025 aa24.86■■□□□ 1.57
LMNA-221ENST00000506981 C2CD5Q86YS7 1000 aa24.86■■□□□ 1.57
LMNA-221ENST00000506981 CCDC24Q8N4L8 307 aa24.86■■□□□ 1.57
LMNA-221ENST00000506981 PLBD2Q8NHP8 589 aa24.86■■□□□ 1.57
LMNA-221ENST00000506981 SPINK5Q9NQ38 1064 aaPredicted RBP24.86■■□□□ 1.57
LMNA-221ENST00000506981 BCS1LQ9Y276 419 aa24.86■■□□□ 1.57
LMNA-221ENST00000506981 IBTKQ9P2D0 1353 aaPredicted RBP24.85■■□□□ 1.57
LMNA-221ENST00000506981 ANKRD13DQ6ZTN6 518 aa24.85■■□□□ 1.57
LMNA-221ENST00000506981 ZNF34Q8IZ26 560 aa24.85■■□□□ 1.57
LMNA-221ENST00000506981 PPP1R42Q7Z4L9 355 aa24.84■■□□□ 1.57
LMNA-221ENST00000506981 UBN2Q6ZU65 1347 aa24.84■■□□□ 1.57
LMNA-221ENST00000506981 E9PSI1 815 aa24.83■■□□□ 1.57
LMNA-221ENST00000506981 DDX58O95786 925 aaKnown RBP24.83■■□□□ 1.57
LMNA-221ENST00000506981 DALRD3Q5D0E6 543 aaKnown RBP24.83■■□□□ 1.57
LMNA-221ENST00000506981 KCNA3P22001 575 aa24.82■■□□□ 1.56
LMNA-221ENST00000506981 RIC3Q7Z5B4 369 aa24.82■■□□□ 1.56
LMNA-221ENST00000506981 PHAXQ9H814 394 aaKnown RBP24.82■■□□□ 1.56
LMNA-221ENST00000506981 TNRC6CQ9HCJ0 1690 aaKnown RBP24.81■■□□□ 1.56
LMNA-221ENST00000506981 TCERG1O14776 1098 aaKnown RBP24.81■■□□□ 1.56
LMNA-221ENST00000506981 TCIRG1Q13488 830 aa24.81■■□□□ 1.56
LMNA-221ENST00000506981 SUSD4Q5VX71 490 aa24.8■■□□□ 1.56
LMNA-221ENST00000506981 VAMP4O75379 141 aa24.79■■□□□ 1.56
LMNA-221ENST00000506981 NUTM1Q86Y26 1132 aa24.79■■□□□ 1.56
LMNA-221ENST00000506981 ZNF622Q969S3 477 aaKnown RBP eCLIP24.79■■□□□ 1.56
LMNA-221ENST00000506981 UTP14AQ9BVJ6 771 aaKnown RBP24.79■■□□□ 1.56
LMNA-221ENST00000506981 LAMB2P55268 1798 aa24.78■■□□□ 1.56
LMNA-221ENST00000506981 SLC4A2P04920 1241 aa24.78■■□□□ 1.56
LMNA-221ENST00000506981 TTLL6Q8N841 843 aa24.78■■□□□ 1.56
LMNA-221ENST00000506981 RNF123Q5XPI4 1314 aa24.78■■□□□ 1.56
LMNA-221ENST00000506981 RIC1Q4ADV7 1423 aa24.78■■□□□ 1.56
LMNA-221ENST00000506981 NTSR2O95665 410 aa24.77■■□□□ 1.56
LMNA-221ENST00000506981 YY1P25490 414 aa24.77■■□□□ 1.56
LMNA-221ENST00000506981 ERFEQ4G0M1 354 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms