RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 BRIP1Q9BX63 1249 aa11.94□□□□□ -0.5
PDLIM5-209ENST00000506632 COL11A2P13942 1736 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-209ENST00000506632 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
PDLIM5-209ENST00000506632 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
PDLIM5-209ENST00000506632 TSPYL4Q9UJ04 414 aa11.93□□□□□ -0.5
PDLIM5-209ENST00000506632 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
PDLIM5-209ENST00000506632 PDZRN3Q9UPQ7 1066 aa11.93□□□□□ -0.5
PDLIM5-209ENST00000506632 ZNF652Q9Y2D9 606 aa11.93□□□□□ -0.5
PDLIM5-209ENST00000506632 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-209ENST00000506632 PDE6BP35913 854 aa11.92□□□□□ -0.5
PDLIM5-209ENST00000506632 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
PDLIM5-209ENST00000506632 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
PDLIM5-209ENST00000506632 TTLL6Q8N841 843 aa11.92□□□□□ -0.5
PDLIM5-209ENST00000506632 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
PDLIM5-209ENST00000506632 SBF1O95248 1867 aa11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 ERVV-1B6SEH8 477 aa11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 H0YIN7 160 aa11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 CHL1O00533 1208 aa11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 HLFQ16534 295 aa11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 LRP10Q7Z4F1 713 aa11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 GPBP1L1Q9HC44 474 aaPredicted RBP11.91□□□□□ -0.5
PDLIM5-209ENST00000506632 MAP3K15Q6ZN16 1313 aa11.9□□□□□ -0.5
PDLIM5-209ENST00000506632 KLRG2A4D1S0 409 aaPredicted RBP11.9□□□□□ -0.5
PDLIM5-209ENST00000506632 PDIA6Q15084 440 aa11.9□□□□□ -0.5
PDLIM5-209ENST00000506632 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
PDLIM5-209ENST00000506632 NIP7Q9Y221 180 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDLIM5-209ENST00000506632 NUP98P52948 1817 aa11.9□□□□□ -0.5
PDLIM5-209ENST00000506632 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.51
PDLIM5-209ENST00000506632 SRGNP10124 158 aa11.89□□□□□ -0.51
PDLIM5-209ENST00000506632 ST5P78524 1137 aa11.89□□□□□ -0.51
PDLIM5-209ENST00000506632 C9orf131Q5VYM1 1079 aa11.89□□□□□ -0.51
PDLIM5-209ENST00000506632 TTLL7Q6ZT98 887 aa11.89□□□□□ -0.51
PDLIM5-209ENST00000506632 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
PDLIM5-209ENST00000506632 ZNF316A6NFI3 1004 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 KIF3CO14782 793 aa11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 MYL6BP14649 208 aa11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 PRELPP51888 382 aa11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 STYK1Q6J9G0 422 aa11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 NGEFQ8N5V2 710 aa11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 ZNF526Q8TF50 670 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 IBTKQ9P2D0 1353 aaPredicted RBP11.88□□□□□ -0.51
PDLIM5-209ENST00000506632 FER1L6Q2WGJ9 1857 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 NFKBIEO00221 500 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 ZNF853P0CG23 659 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 RASSF7Q02833 373 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 KRT24Q2M2I5 525 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 PROSER3Q2NL68 480 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 TPTE2Q6XPS3 522 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 ZNF622Q969S3 477 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 MASTLQ96GX5 879 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 RNF181Q9P0P0 153 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 SLX4Q8IY92 1834 aa11.87□□□□□ -0.51
PDLIM5-209ENST00000506632 UBN2Q6ZU65 1347 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 RIC1Q4ADV7 1423 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 APAF1O14727 1248 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 NPHP1O15259 732 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 HOXB7P09629 217 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 ZNF34Q8IZ26 560 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 ZBTB3Q9H5J0 574 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 ABCC12Q96J65 1359 aa11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 TNRC6CQ9HCJ0 1690 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 ZC3H4Q9UPT8 1303 aaKnown RBP11.86□□□□□ -0.51
PDLIM5-209ENST00000506632 ANXA1P04083 346 aa11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 NPR1P16066 1061 aa11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 LMNB1P20700 586 aa11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 CACNA1SQ13698 1873 aa11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 LTBP3Q9NS15 1303 aa11.85□□□□□ -0.51
PDLIM5-209ENST00000506632 FAM177BA6PVY3 158 aa11.84□□□□□ -0.51
PDLIM5-209ENST00000506632 C21orf2O43822 256 aa11.84□□□□□ -0.51
PDLIM5-209ENST00000506632 CRY2Q49AN0 593 aa11.84□□□□□ -0.51
PDLIM5-209ENST00000506632 DDX21Q9NR30 783 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDLIM5-209ENST00000506632 MBIPQ9NS73 344 aa11.84□□□□□ -0.51
PDLIM5-209ENST00000506632 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-209ENST00000506632 CCDC88AQ3V6T2 1871 aa11.84□□□□□ -0.51
PDLIM5-209ENST00000506632 TIAM2Q8IVF5 1701 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 NTSR2O95665 410 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 GPTP24298 496 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 SUSD4Q5VX71 490 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 NUTM1Q86Y26 1132 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 NMRK2Q9NPI5 230 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 IFT57Q9NWB7 429 aa11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 DICER1Q9UPY3 1922 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-209ENST00000506632 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
PDLIM5-209ENST00000506632 ERFEQ4G0M1 354 aa11.82□□□□□ -0.52
PDLIM5-209ENST00000506632 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
PDLIM5-209ENST00000506632 SOGA3Q5TF21 947 aa11.82□□□□□ -0.52
PDLIM5-209ENST00000506632 HDGFL1Q5TGJ6 251 aa11.82□□□□□ -0.52
PDLIM5-209ENST00000506632 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
PDLIM5-209ENST00000506632 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms