RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 BICDL1Q6ZP65 573 aa19.08■□□□□ 0.64
DSP-203ENST00000506617 NECTIN2Q92692 538 aa19.08■□□□□ 0.64
DSP-203ENST00000506617 TSR2Q969E8 191 aaKnown RBP19.08■□□□□ 0.64
DSP-203ENST00000506617 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.64
DSP-203ENST00000506617 ZNF428Q96B54 188 aa19.07■□□□□ 0.64
DSP-203ENST00000506617 PXDNLA1KZ92 1463 aa19.07■□□□□ 0.64
DSP-203ENST00000506617 BRCA1P38398 1863 aaKnown RBP19.07■□□□□ 0.64
DSP-203ENST00000506617 ANXA1P04083 346 aa19.06■□□□□ 0.64
DSP-203ENST00000506617 PDIA6Q15084 440 aa19.06■□□□□ 0.64
DSP-203ENST00000506617 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
DSP-203ENST00000506617 PROSER3Q2NL68 480 aa19.05■□□□□ 0.64
DSP-203ENST00000506617 HDGFL1Q5TGJ6 251 aa19.05■□□□□ 0.64
DSP-203ENST00000506617 ANKRD31Q8N7Z5 1873 aa19.05■□□□□ 0.64
DSP-203ENST00000506617 CARMIL3Q8ND23 1372 aa19.05■□□□□ 0.64
DSP-203ENST00000506617 SERPINB2P05120 415 aa19.04■□□□□ 0.64
DSP-203ENST00000506617 TTLL7Q6ZT98 887 aa19.04■□□□□ 0.64
DSP-203ENST00000506617 LRP10Q7Z4F1 713 aa19.04■□□□□ 0.64
DSP-203ENST00000506617 PELP1Q8IZL8 1130 aaKnown RBP19.04■□□□□ 0.64
DSP-203ENST00000506617 C8orf58Q8NAV2 365 aa19.04■□□□□ 0.64
DSP-203ENST00000506617 ZNF652Q9Y2D9 606 aa19.04■□□□□ 0.64
DSP-203ENST00000506617 EXOSC9Q06265 439 aaKnown RBP19.03■□□□□ 0.64
DSP-203ENST00000506617 TWISTNBQ3B726 338 aaPredicted RBP19.03■□□□□ 0.64
DSP-203ENST00000506617 CLEC4GQ6UXB4 293 aa19.03■□□□□ 0.64
DSP-203ENST00000506617 KIF6Q6ZMV9 814 aa19.03■□□□□ 0.64
DSP-203ENST00000506617 ANKRD36CQ5JPF3 1778 aa19.03■□□□□ 0.64
DSP-203ENST00000506617 DLEC1Q9Y238 1755 aa19.03■□□□□ 0.64
DSP-203ENST00000506617 MAP3K15Q6ZN16 1313 aa19.02■□□□□ 0.64
DSP-203ENST00000506617 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
DSP-203ENST00000506617 RGL2O15211 777 aa19.02■□□□□ 0.64
DSP-203ENST00000506617 VAMP4O75379 141 aa19.02■□□□□ 0.64
DSP-203ENST00000506617 HLFQ16534 295 aa19.02■□□□□ 0.64
DSP-203ENST00000506617 DDX21Q9NR30 783 aaKnown RBP eCLIP19.02■□□□□ 0.64
DSP-203ENST00000506617 CHPF2Q9P2E5 772 aa19.02■□□□□ 0.64
DSP-203ENST00000506617 TGFB2P61812 414 aa19.01■□□□□ 0.63
DSP-203ENST00000506617 GPR162Q16538 588 aa19.01■□□□□ 0.63
DSP-203ENST00000506617 YTHDC1Q96MU7 727 aaKnown RBP19.01■□□□□ 0.63
DSP-203ENST00000506617 SETDB2Q96T68 719 aa19.01■□□□□ 0.63
DSP-203ENST00000506617 ZBTB3Q9H5J0 574 aa19.01■□□□□ 0.63
DSP-203ENST00000506617 WWC3Q9ULE0 1092 aa19.01■□□□□ 0.63
DSP-203ENST00000506617 CHD4Q14839 1912 aa19.01■□□□□ 0.63
DSP-203ENST00000506617 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
DSP-203ENST00000506617 YBX3P16989 372 aaKnown RBP eCLIP19■□□□□ 0.632e-11■■■□□ 15.1
DSP-203ENST00000506617 TSPYL6Q8N831 410 aa19■□□□□ 0.63
DSP-203ENST00000506617 ATP10DQ9P241 1426 aa19■□□□□ 0.63
DSP-203ENST00000506617 A0A0G2JLW4 131 aa18.99■□□□□ 0.63
DSP-203ENST00000506617 ERVV-1B6SEH8 477 aa18.99■□□□□ 0.63
DSP-203ENST00000506617 DPEP1P16444 411 aa18.99■□□□□ 0.63
DSP-203ENST00000506617 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
DSP-203ENST00000506617 PRR5LQ6MZQ0 368 aa18.99■□□□□ 0.63
DSP-203ENST00000506617 XAGE3Q8WTP9 111 aa18.99■□□□□ 0.63
DSP-203ENST00000506617 NIP7Q9Y221 180 aaKnown RBP eCLIP18.99■□□□□ 0.634e-7■■■□□ 15.7
DSP-203ENST00000506617 UTRNP46939 3433 aa18.99■□□□□ 0.63
DSP-203ENST00000506617 GOLGB1Q14789 3259 aaKnown RBP18.98■□□□□ 0.63
DSP-203ENST00000506617 AIMP1Q12904 312 aaKnown RBP18.98■□□□□ 0.63
DSP-203ENST00000506617 COPS6Q7L5N1 327 aa18.98■□□□□ 0.63
DSP-203ENST00000506617 DBF4Q9UBU7 674 aaPredicted RBP18.98■□□□□ 0.63
DSP-203ENST00000506617 ARFGEF2Q9Y6D5 1785 aa18.98■□□□□ 0.63
DSP-203ENST00000506617 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
DSP-203ENST00000506617 CCDC24Q8N4L8 307 aa18.97■□□□□ 0.63
DSP-203ENST00000506617 CNBD1Q8NA66 436 aa18.97■□□□□ 0.63
DSP-203ENST00000506617 CHRNA5P30532 468 aa18.96■□□□□ 0.63
DSP-203ENST00000506617 ALDH1L2Q3SY69 923 aa18.96■□□□□ 0.63
DSP-203ENST00000506617 GIGYF2Q6Y7W6 1299 aaKnown RBP18.96■□□□□ 0.63
DSP-203ENST00000506617 CACNA1SQ13698 1873 aa18.96■□□□□ 0.63
DSP-203ENST00000506617 FAM177BA6PVY3 158 aa18.95■□□□□ 0.62
DSP-203ENST00000506617 NPHP1O15259 732 aa18.95■□□□□ 0.62
DSP-203ENST00000506617 NBPF5PQ86XG9 351 aaPredicted RBP18.95■□□□□ 0.62
DSP-203ENST00000506617 HYPKQ9NX55 129 aa18.95■□□□□ 0.62
DSP-203ENST00000506617 UBN2Q6ZU65 1347 aa18.95■□□□□ 0.62
DSP-203ENST00000506617 TNRC6CQ9HCJ0 1690 aaKnown RBP18.95■□□□□ 0.62
DSP-203ENST00000506617 CACNA1FO60840 1977 aa18.94■□□□□ 0.62
DSP-203ENST00000506617 KCNA3P22001 575 aa18.94■□□□□ 0.62
DSP-203ENST00000506617 GPTP24298 496 aa18.94■□□□□ 0.62
DSP-203ENST00000506617 BRPF1P55201 1214 aaPredicted RBP18.94■□□□□ 0.62
DSP-203ENST00000506617 ST5P78524 1137 aa18.94■□□□□ 0.62
DSP-203ENST00000506617 STK31Q9BXU1 1019 aa18.94■□□□□ 0.62
DSP-203ENST00000506617 GRIN3BO60391 1043 aa18.92■□□□□ 0.62
DSP-203ENST00000506617 ZNF34Q8IZ26 560 aa18.92■□□□□ 0.62
DSP-203ENST00000506617 PHAXQ9H814 394 aaKnown RBP18.92■□□□□ 0.62
DSP-203ENST00000506617 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
DSP-203ENST00000506617 IBTKQ9P2D0 1353 aaPredicted RBP18.92■□□□□ 0.62
DSP-203ENST00000506617 C2CD5Q86YS7 1000 aa18.91■□□□□ 0.62
DSP-203ENST00000506617 BRIP1Q9BX63 1249 aa18.91■□□□□ 0.62
DSP-203ENST00000506617 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
DSP-203ENST00000506617 ABCC12Q96J65 1359 aa18.91■□□□□ 0.62
DSP-203ENST00000506617 TCERG1O14776 1098 aaKnown RBP18.9■□□□□ 0.62
DSP-203ENST00000506617 PDE6BP35913 854 aa18.9■□□□□ 0.62
DSP-203ENST00000506617 RARSP54136 660 aaKnown RBP18.9■□□□□ 0.62
DSP-203ENST00000506617 HSP90AB3PQ58FF7 597 aa18.9■□□□□ 0.62
DSP-203ENST00000506617 SUSD4Q5VX71 490 aa18.9■□□□□ 0.62
DSP-203ENST00000506617 TPTE2Q6XPS3 522 aa18.9■□□□□ 0.62
DSP-203ENST00000506617 PLBD2Q8NHP8 589 aa18.9■□□□□ 0.62
DSP-203ENST00000506617 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
DSP-203ENST00000506617 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
DSP-203ENST00000506617 NYXQ9GZU5 481 aa18.89■□□□□ 0.61
DSP-203ENST00000506617 H0YIN7 160 aa18.88■□□□□ 0.61
DSP-203ENST00000506617 NTSR2O95665 410 aa18.88■□□□□ 0.61
DSP-203ENST00000506617 GTF2E1P29083 439 aaPredicted RBP18.88■□□□□ 0.61
DSP-203ENST00000506617 PARP10Q53GL7 1025 aa18.88■□□□□ 0.61
DSP-203ENST00000506617 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms