RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 AEBP1Q8IUX7 1158 aa10.39□□□□□ -0.75
NIPBL-205ENST00000505998 CCER1Q8TC90 406 aaPredicted RBP10.39□□□□□ -0.75
NIPBL-205ENST00000505998 TERTO14746 1132 aaKnown RBP10.38□□□□□ -0.75
NIPBL-205ENST00000505998 KCNA1Q09470 495 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 VWA5B2Q8N398 1253 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
NIPBL-205ENST00000505998 ZNF837Q96EG3 531 aaPredicted RBP10.38□□□□□ -0.75
NIPBL-205ENST00000505998 HSH2DQ96JZ2 352 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 KLK14Q9P0G3 267 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 LRFN2Q9ULH4 789 aa10.38□□□□□ -0.75
NIPBL-205ENST00000505998 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
NIPBL-205ENST00000505998 H3BM21 787 aa10.37□□□□□ -0.75
NIPBL-205ENST00000505998 ABL1P00519 1130 aa10.37□□□□□ -0.75
NIPBL-205ENST00000505998 FIGNL1Q6PIW4 674 aa10.37□□□□□ -0.75
NIPBL-205ENST00000505998 TXNDC2Q86VQ3 553 aa10.37□□□□□ -0.75
NIPBL-205ENST00000505998 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
NIPBL-205ENST00000505998 SUSD3Q96L08 255 aa10.37□□□□□ -0.75
NIPBL-205ENST00000505998 FOXR1Q6PIV2 292 aa10.36□□□□□ -0.75
NIPBL-205ENST00000505998 NANOS1Q8WY41 292 aaKnown RBP10.36□□□□□ -0.75
NIPBL-205ENST00000505998 GTPBP3Q969Y2 492 aaKnown RBP10.36□□□□□ -0.75
NIPBL-205ENST00000505998 KLRG1Q96E93 195 aa10.36□□□□□ -0.75
NIPBL-205ENST00000505998 THBS1P07996 1170 aa10.35□□□□□ -0.75
NIPBL-205ENST00000505998 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
NIPBL-205ENST00000505998 SERPINB4P48594 390 aa10.35□□□□□ -0.75
NIPBL-205ENST00000505998 ZNF280CQ8ND82 737 aa10.35□□□□□ -0.75
NIPBL-205ENST00000505998 HELQQ8TDG4 1101 aa10.35□□□□□ -0.75
NIPBL-205ENST00000505998 ZCCHC2Q9C0B9 1178 aaKnown RBP10.35□□□□□ -0.75
NIPBL-205ENST00000505998 TGFBR3LH3BV60 316 aa10.34□□□□□ -0.75
NIPBL-205ENST00000505998 IFT43Q96FT9 208 aa10.34□□□□□ -0.75
NIPBL-205ENST00000505998 GNEQ9Y223 722 aaKnown RBP10.34□□□□□ -0.75
NIPBL-205ENST00000505998 PCDHGC4Q9Y5F7 938 aa10.34□□□□□ -0.75
NIPBL-205ENST00000505998 DNMT3AQ9Y6K1 912 aaPredicted RBP10.34□□□□□ -0.75
NIPBL-205ENST00000505998 ATXN7O15265 892 aaPredicted RBP10.33□□□□□ -0.76
NIPBL-205ENST00000505998 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
NIPBL-205ENST00000505998 TRERF1Q96PN7 1200 aa10.33□□□□□ -0.76
NIPBL-205ENST00000505998 ANO2Q9NQ90 1003 aa10.33□□□□□ -0.76
NIPBL-205ENST00000505998 STIM2Q9P246 746 aa10.33□□□□□ -0.76
NIPBL-205ENST00000505998 BCS1LQ9Y276 419 aa10.33□□□□□ -0.76
NIPBL-205ENST00000505998 TNFRSF10BO14763 440 aa10.32□□□□□ -0.76
NIPBL-205ENST00000505998 ZNF211Q13398 564 aaPredicted RBP10.32□□□□□ -0.76
NIPBL-205ENST00000505998 IER5Q5VY09 327 aa10.32□□□□□ -0.76
NIPBL-205ENST00000505998 CEP63Q96MT8 703 aa10.32□□□□□ -0.76
NIPBL-205ENST00000505998 EGFL7Q9UHF1 273 aa10.32□□□□□ -0.76
NIPBL-205ENST00000505998 PHF24Q9UPV7 400 aa10.32□□□□□ -0.76
NIPBL-205ENST00000505998 IVNS1ABPQ9Y6Y0 642 aa10.32□□□□□ -0.76
NIPBL-205ENST00000505998 GPR25O00155 361 aa10.31□□□□□ -0.76
NIPBL-205ENST00000505998 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
NIPBL-205ENST00000505998 MTMR3Q13615 1198 aa10.31□□□□□ -0.76
NIPBL-205ENST00000505998 UBAP2LQ14157 1087 aaKnown RBP10.31□□□□□ -0.76
NIPBL-205ENST00000505998 BTLAQ7Z6A9 289 aa10.31□□□□□ -0.76
NIPBL-205ENST00000505998 ABTB2Q8N961 1025 aa10.31□□□□□ -0.76
NIPBL-205ENST00000505998 IRF7Q92985 503 aa10.31□□□□□ -0.76
NIPBL-205ENST00000505998 KHNYNO15037 678 aaKnown RBP10.3□□□□□ -0.76
NIPBL-205ENST00000505998 MICAL2O94851 1124 aa10.3□□□□□ -0.76
NIPBL-205ENST00000505998 FAM157BP0CG42 384 aa10.3□□□□□ -0.76
NIPBL-205ENST00000505998 FKBP4Q02790 459 aaKnown RBP eCLIP10.3□□□□□ -0.76
NIPBL-205ENST00000505998 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
NIPBL-205ENST00000505998 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 H3BRB1 525 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 BNIP3LO60238 219 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 IDH3AP50213 366 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 NFX1Q12986 1120 aaKnown RBP10.29□□□□□ -0.76
NIPBL-205ENST00000505998 TREML1Q86YW5 311 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 ETFBKMTQ8IXQ9 262 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 ABHD17AQ96GS6 310 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 CFHR5Q9BXR6 569 aa10.29□□□□□ -0.76
NIPBL-205ENST00000505998 TUT1Q9H6E5 874 aaKnown RBP10.29□□□□□ -0.76
NIPBL-205ENST00000505998 ATXN7L1Q9ULK2 861 aaPredicted RBP10.29□□□□□ -0.76
NIPBL-205ENST00000505998 ICMTO60725 284 aa10.28□□□□□ -0.76
NIPBL-205ENST00000505998 FAM13AO94988 1023 aa10.28□□□□□ -0.76
NIPBL-205ENST00000505998 TYRO3Q06418 890 aa10.28□□□□□ -0.76
NIPBL-205ENST00000505998 GLYCTKQ8IVS8 523 aa10.28□□□□□ -0.76
NIPBL-205ENST00000505998 GPR161Q8N6U8 529 aaKnown RBP10.28□□□□□ -0.76
NIPBL-205ENST00000505998 BRD7Q9NPI1 651 aa10.28□□□□□ -0.76
NIPBL-205ENST00000505998 NDFIP2Q9NV92 336 aa10.28□□□□□ -0.76
NIPBL-205ENST00000505998 DMGDHQ9UI17 866 aaKnown RBP10.28□□□□□ -0.76
NIPBL-205ENST00000505998 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
NIPBL-205ENST00000505998 WFS1O76024 890 aa10.27□□□□□ -0.77
NIPBL-205ENST00000505998 MAPTP10636 758 aaKnown RBP10.27□□□□□ -0.77
NIPBL-205ENST00000505998 MPSTP25325 297 aa10.27□□□□□ -0.77
NIPBL-205ENST00000505998 TNP2Q05952 138 aa10.27□□□□□ -0.77
NIPBL-205ENST00000505998 FAM26DQ5JW98 314 aa10.27□□□□□ -0.77
NIPBL-205ENST00000505998 ARSDP51689 593 aa10.26□□□□□ -0.77
NIPBL-205ENST00000505998 NOM1Q5C9Z4 860 aaKnown RBP10.26□□□□□ -0.77
NIPBL-205ENST00000505998 SOWAHDA6NJG2 315 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 EFSO43281 561 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 EPB42P16452 691 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 NPR3P17342 541 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 FGFR3P22607 806 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 ZAP70P43403 619 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 LAMC2Q13753 1193 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 ALKBH2Q6NS38 261 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 FAM13BQ9NYF5 915 aa10.25□□□□□ -0.77
NIPBL-205ENST00000505998 ZBTB39O15060 712 aa10.24□□□□□ -0.77
NIPBL-205ENST00000505998 INPP5BP32019 993 aa10.24□□□□□ -0.77
NIPBL-205ENST00000505998 EIF1AXP47813 144 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms