RNA–Protein interactions for RNA: ENST00000505831.1

SUDS3P1-201, Transcript of SDS3 homolog, SIN3A corepressor complex component pseudogene 1, humanhuman

BASIC

Gene SUDS3P1, Length 966 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3P1-201ENST00000505831 PNNQ9H307 717 aaKnown RBP29.4■■■□□ 2.3
SUDS3P1-201ENST00000505831 TIAM2Q8IVF5 1701 aa29.38■■■□□ 2.29
SUDS3P1-201ENST00000505831 CNBD1Q8NA66 436 aa29.38■■■□□ 2.29
SUDS3P1-201ENST00000505831 ZC3H4Q9UPT8 1303 aaKnown RBP29.38■■■□□ 2.29
SUDS3P1-201ENST00000505831 NFKBIEO00221 500 aa29.37■■■□□ 2.29
SUDS3P1-201ENST00000505831 LMNB1P20700 586 aa29.37■■■□□ 2.29
SUDS3P1-201ENST00000505831 THUMPD2Q9BTF0 503 aaKnown RBP29.37■■■□□ 2.29
SUDS3P1-201ENST00000505831 EIF4A1P60842 406 aaKnown RBP29.36■■■□□ 2.29
SUDS3P1-201ENST00000505831 ZNF622Q969S3 477 aaKnown RBP eCLIP29.36■■■□□ 2.29
SUDS3P1-201ENST00000505831 KDM2BQ8NHM5 1336 aa29.36■■■□□ 2.29
SUDS3P1-201ENST00000505831 SRGNP10124 158 aa29.35■■■□□ 2.29
SUDS3P1-201ENST00000505831 ZNF652Q9Y2D9 606 aa29.35■■■□□ 2.29
SUDS3P1-201ENST00000505831 ST5P78524 1137 aa29.33■■■□□ 2.29
SUDS3P1-201ENST00000505831 DDX10Q13206 875 aaKnown RBP29.33■■■□□ 2.29
SUDS3P1-201ENST00000505831 STYK1Q6J9G0 422 aa29.33■■■□□ 2.29
SUDS3P1-201ENST00000505831 MAPK8IP3Q9UPT6 1336 aa29.32■■■□□ 2.28
SUDS3P1-201ENST00000505831 HLFQ16534 295 aa29.32■■■□□ 2.28
SUDS3P1-201ENST00000505831 RBM46Q8TBY0 533 aaKnown RBP29.32■■■□□ 2.28
SUDS3P1-201ENST00000505831 KLRG2A4D1S0 409 aaPredicted RBP29.31■■■□□ 2.28
SUDS3P1-201ENST00000505831 C21orf2O43822 256 aa29.31■■■□□ 2.28
SUDS3P1-201ENST00000505831 NBPF5PQ86XG9 351 aaPredicted RBP29.31■■■□□ 2.28
SUDS3P1-201ENST00000505831 RRAGCQ9HB90 399 aa29.31■■■□□ 2.28
SUDS3P1-201ENST00000505831 CNKSR1Q969H4 720 aa29.3■■■□□ 2.28
SUDS3P1-201ENST00000505831 MASTLQ96GX5 879 aa29.3■■■□□ 2.28
SUDS3P1-201ENST00000505831 NIP7Q9Y221 180 aaKnown RBP eCLIP29.3■■■□□ 2.28
SUDS3P1-201ENST00000505831 TPTE2Q6XPS3 522 aa29.29■■■□□ 2.28
SUDS3P1-201ENST00000505831 GLTPD2A6NH11 291 aa29.28■■■□□ 2.28
SUDS3P1-201ENST00000505831 LTBP3Q9NS15 1303 aa29.27■■■□□ 2.28
SUDS3P1-201ENST00000505831 ERVV-1B6SEH8 477 aa29.27■■■□□ 2.28
SUDS3P1-201ENST00000505831 NPHP1O15259 732 aa29.27■■■□□ 2.28
SUDS3P1-201ENST00000505831 C7orf43Q8WVR3 580 aa29.27■■■□□ 2.28
SUDS3P1-201ENST00000505831 RIPK4P57078 832 aa29.26■■■□□ 2.27
SUDS3P1-201ENST00000505831 PRPF40BQ6NWY9 871 aaKnown RBP29.26■■■□□ 2.27
SUDS3P1-201ENST00000505831 WDR90Q96KV7 1748 aa29.25■■■□□ 2.27
SUDS3P1-201ENST00000505831 MYBBP1AQ9BQG0 1328 aaKnown RBP29.25■■■□□ 2.27
SUDS3P1-201ENST00000505831 TMPOP42166 694 aaKnown RBP29.25■■■□□ 2.27
SUDS3P1-201ENST00000505831 APLP1P51693 650 aa29.25■■■□□ 2.27
SUDS3P1-201ENST00000505831 ZNF219Q9P2Y4 722 aaPredicted RBP29.25■■■□□ 2.27
SUDS3P1-201ENST00000505831 C16orf71Q8IYS4 520 aaPredicted RBP29.24■■■□□ 2.27
SUDS3P1-201ENST00000505831 BABAM1Q9NWV8 329 aa29.24■■■□□ 2.27
SUDS3P1-201ENST00000505831 RRP7AQ9Y3A4 280 aaKnown RBP29.24■■■□□ 2.27
SUDS3P1-201ENST00000505831 MAP3K15Q6ZN16 1313 aa29.23■■■□□ 2.27
SUDS3P1-201ENST00000505831 FSTL1Q12841 308 aa29.23■■■□□ 2.27
SUDS3P1-201ENST00000505831 TTLL7Q6ZT98 887 aa29.23■■■□□ 2.27
SUDS3P1-201ENST00000505831 NPR1P16066 1061 aa29.22■■■□□ 2.27
SUDS3P1-201ENST00000505831 NGEFQ8N5V2 710 aa29.22■■■□□ 2.27
SUDS3P1-201ENST00000505831 DNAJC5GQ8N7S2 189 aa29.22■■■□□ 2.27
SUDS3P1-201ENST00000505831 ERBB4Q15303 1308 aa29.21■■■□□ 2.27
SUDS3P1-201ENST00000505831 TSPYL4Q9UJ04 414 aa29.21■■■□□ 2.27
SUDS3P1-201ENST00000505831 VEGFAP15692 232 aaPredicted RBP29.2■■■□□ 2.26
SUDS3P1-201ENST00000505831 SOGA3Q5TF21 947 aa29.2■■■□□ 2.26
SUDS3P1-201ENST00000505831 LRP10Q7Z4F1 713 aa29.2■■■□□ 2.26
SUDS3P1-201ENST00000505831 TAOK3Q9H2K8 898 aa29.2■■■□□ 2.26
SUDS3P1-201ENST00000505831 POTECB2RU33 542 aa29.19■■■□□ 2.26
SUDS3P1-201ENST00000505831 MYL6BP14649 208 aa29.19■■■□□ 2.26
SUDS3P1-201ENST00000505831 PDIA6Q15084 440 aa29.19■■■□□ 2.26
SUDS3P1-201ENST00000505831 FAM177BA6PVY3 158 aa29.18■■■□□ 2.26
SUDS3P1-201ENST00000505831 ERFEQ4G0M1 354 aa29.18■■■□□ 2.26
SUDS3P1-201ENST00000505831 LMOD3Q0VAK6 560 aa29.16■■■□□ 2.26
SUDS3P1-201ENST00000505831 CRY2Q49AN0 593 aa29.16■■■□□ 2.26
SUDS3P1-201ENST00000505831 KIF6Q6ZMV9 814 aa29.16■■■□□ 2.26
SUDS3P1-201ENST00000505831 ZNF34Q8IZ26 560 aa29.16■■■□□ 2.26
SUDS3P1-201ENST00000505831 NYXQ9GZU5 481 aa29.16■■■□□ 2.26
SUDS3P1-201ENST00000505831 ANKRD36CQ5JPF3 1778 aa29.16■■■□□ 2.26
SUDS3P1-201ENST00000505831 DPY19L2Q6NUT2 758 aa29.15■■■□□ 2.26
SUDS3P1-201ENST00000505831 UBN2Q6ZU65 1347 aa29.15■■■□□ 2.26
SUDS3P1-201ENST00000505831 IBTKQ9P2D0 1353 aaPredicted RBP29.14■■■□□ 2.26
SUDS3P1-201ENST00000505831 GIGYF2Q6Y7W6 1299 aaKnown RBP29.14■■■□□ 2.26
SUDS3P1-201ENST00000505831 CCDC146Q8IYE0 955 aa29.14■■■□□ 2.26
SUDS3P1-201ENST00000505831 ZBTB3Q9H5J0 574 aa29.14■■■□□ 2.26
SUDS3P1-201ENST00000505831 TRIM35Q9UPQ4 493 aa29.14■■■□□ 2.26
SUDS3P1-201ENST00000505831 ABCC12Q96J65 1359 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 RIC1Q4ADV7 1423 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 GTF2E1P29083 439 aaPredicted RBP29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 ALDH1B1P30837 517 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 CCDC93Q567U6 631 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 NUTM1Q86Y26 1132 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 SMC1BQ8NDV3 1235 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 RUNDC1Q96C34 613 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 SCN4AP35499 1836 aa29.13■■■□□ 2.25
SUDS3P1-201ENST00000505831 CHL1O00533 1208 aa29.12■■■□□ 2.25
SUDS3P1-201ENST00000505831 SUSD4Q5VX71 490 aa29.12■■■□□ 2.25
SUDS3P1-201ENST00000505831 ADAMTS8Q9UP79 889 aa29.12■■■□□ 2.25
SUDS3P1-201ENST00000505831 GPTP24298 496 aa29.11■■■□□ 2.25
SUDS3P1-201ENST00000505831 PRKRIP1Q9H875 184 aaPredicted RBP29.11■■■□□ 2.25
SUDS3P1-201ENST00000505831 SNED1Q8TER0 1413 aa29.11■■■□□ 2.25
SUDS3P1-201ENST00000505831 EIF2S2P20042 333 aaKnown RBP29.1■■■□□ 2.25
SUDS3P1-201ENST00000505831 PROSER3Q2NL68 480 aa29.1■■■□□ 2.25
SUDS3P1-201ENST00000505831 OLFM4Q6UX06 510 aa29.1■■■□□ 2.25
SUDS3P1-201ENST00000505831 PCNTO95613 3336 aa29.1■■■□□ 2.25
SUDS3P1-201ENST00000505831 HOXA10P31260 410 aaPredicted RBP29.09■■■□□ 2.25
SUDS3P1-201ENST00000505831 FKBP4Q02790 459 aaKnown RBP eCLIP29.09■■■□□ 2.25
SUDS3P1-201ENST00000505831 NEUROD2Q15784 382 aa29.09■■■□□ 2.25
SUDS3P1-201ENST00000505831 LAMB2P55268 1798 aa29.08■■■□□ 2.25
SUDS3P1-201ENST00000505831 RTKN2Q8IZC4 609 aa29.08■■■□□ 2.25
SUDS3P1-201ENST00000505831 NTSR2O95665 410 aa29.07■■■□□ 2.24
SUDS3P1-201ENST00000505831 WDR43Q15061 677 aaKnown RBP eCLIP29.07■■■□□ 2.24
SUDS3P1-201ENST00000505831 DDNO94850 711 aaPredicted RBP29.06■■■□□ 2.24
SUDS3P1-201ENST00000505831 ANXA1P04083 346 aa29.06■■■□□ 2.24
SUDS3P1-201ENST00000505831 HTRA3P83110 453 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms