RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 WDR33Q9C0J8 1336 aaKnown RBP9.24□□□□□ -0.93
ATP2C1-208ENST00000504948 SERPINC1P01008 464 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 MAP3K11Q16584 847 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 TICAM2Q86XR7 235 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 RASSF8Q8NHQ8 419 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 PLEKHA4Q9H4M7 779 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 LMBRD1Q9NUN5 540 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 DNAI1Q9UI46 699 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 KINO60870 393 aaKnown RBP9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 MNAT1P51948 309 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 SETQ01105 290 aaPredicted RBP9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 KRBA2Q6ZNG9 492 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 ANO6Q4KMQ2 910 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 NOM1Q5C9Z4 860 aaKnown RBP9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 FBXO41Q8TF61 875 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 LRRC2Q9BYS8 371 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 NRBP1Q9UHY1 535 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 SDSP20132 328 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 CCDC183Q5T5S1 534 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 KIF18AQ8NI77 898 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 FBXO3Q9UK99 471 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 USP16Q9Y5T5 823 aa9.23□□□□□ -0.93
ATP2C1-208ENST00000504948 KIF20AO95235 890 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 SKILP12757 684 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 ARHGAP29Q52LW3 1261 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 PIBF1Q8WXW3 757 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 GDAP1L1Q96MZ0 367 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 CWC15Q9P013 229 aaKnown RBP9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 LRRFIP2Q9Y608 721 aaKnown RBP9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 CWC22Q9HCG8 908 aaKnown RBP9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 COL18A1P39060 1754 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 FAM135BQ49AJ0 1406 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 SYT10Q6XYQ8 523 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 TERF2IPQ9NYB0 399 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 TAF3Q5VWG9 929 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 DACT1Q9NYF0 836 aa9.22□□□□□ -0.93
ATP2C1-208ENST00000504948 PRPF40BQ6NWY9 871 aaKnown RBP9.21□□□□□ -0.93
ATP2C1-208ENST00000504948 HDGFL2Q7Z4V5 671 aaPredicted RBP9.21□□□□□ -0.93
ATP2C1-208ENST00000504948 SMC5Q8IY18 1101 aa9.21□□□□□ -0.93
ATP2C1-208ENST00000504948 PRDM4Q9UKN5 801 aa9.21□□□□□ -0.93
ATP2C1-208ENST00000504948 KRT85P78386 507 aa9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 GPIHBP1Q8IV16 184 aa9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 DNAJC2Q99543 621 aaKnown RBP9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 EIF3AQ14152 1382 aaKnown RBP9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 CFAP100Q494V2 611 aa9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 TMC6Q7Z403 805 aa9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 AK7Q96M32 723 aa9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 ZNF215Q9UL58 517 aaPredicted RBP9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 ANKRD30BQ9BXX2 1392 aa9.21□□□□□ -0.94
ATP2C1-208ENST00000504948 PCMTD1Q96MG8 357 aaPredicted RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 TMPOP42166 694 aaKnown RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 HAP1P54257 671 aaPredicted RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 ERCC6LQ2NKX8 1250 aa9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 IFIT2P09913 472 aaKnown RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 AKAP17AQ02040 695 aaKnown RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 TSPYL6Q8N831 410 aa9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 API5Q9BZZ5 524 aaKnown RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 GPRASP1Q5JY77 1395 aa9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 MYOM1P52179 1685 aa9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 CT47B1P0C2W7 299 aaPredicted RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 ESF1Q9H501 851 aaKnown RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 MTMR7Q9Y216 660 aa9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
ATP2C1-208ENST00000504948 THSD7AQ9UPZ6 1657 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 RRS1Q15050 365 aaKnown RBP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 MCM10Q7L590 875 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 GCC1Q96CN9 775 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 ABCC6O95255 1503 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 SSBP05455 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 ZSCAN20P17040 1043 aaPredicted RBP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 CAPN2P17655 700 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 RDXP35241 583 aaKnown RBP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 NAP1L1P55209 391 aaKnown RBP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 TEFQ10587 303 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 SART3Q15020 963 aaKnown RBP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 SFPQP23246 707 aaKnown RBP eCLIP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 KLHL10Q6JEL2 608 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 CAGE1Q8TC20 777 aa9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 ZCCHC17Q9NP64 241 aaKnown RBP9.19□□□□□ -0.94
ATP2C1-208ENST00000504948 PXDNQ92626 1479 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 CLSTN1O94985 981 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 GJB2P29033 226 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 SNW1Q13573 536 aaKnown RBP9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 BMP2KLQ5H9B9 411 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 CFAP44Q96MT7 982 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 VPS18Q9P253 973 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 TSPYL4Q9UJ04 414 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 PEAK1Q9H792 1746 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 CPLX1O14810 134 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 STX6O43752 255 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 CCDC82Q8N4S0 544 aa9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 C9orf78Q9NZ63 289 aaPredicted RBP9.18□□□□□ -0.94
ATP2C1-208ENST00000504948 OGFRQ9NZT2 677 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms