RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 MAP3K5Q99683 1374 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 CASTP20810 708 aaKnown RBP7□□□□□ -1.29
LINC02397-201ENST00000504409 OTUD6BQ8N6M0 293 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 JAKMIP2Q96AA8 810 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 TRIM35Q9UPQ4 493 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 MX1P20591 662 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 CCT4P50991 539 aaKnown RBP7□□□□□ -1.29
LINC02397-201ENST00000504409 ICE2Q659A1 982 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 HMG20BQ9P0W2 317 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 CBX1P83916 185 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 CFAP58Q5T655 872 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 WWC2Q6AWC2 1192 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 CEP57Q86XR8 500 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 CAPN2P17655 700 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 MAP2K1Q02750 393 aaPredicted RBP7□□□□□ -1.29
LINC02397-201ENST00000504409 SPECC1Q5M775 1068 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 GORABQ5T7V8 394 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 SREK1Q8WXA9 508 aaKnown RBP7□□□□□ -1.29
LINC02397-201ENST00000504409 SATB1Q01826 763 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 DNAI1Q9UI46 699 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 NUP155O75694 1391 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 SHANK2Q9UPX8 1470 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 YY1P25490 414 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 PAFAH1B1P43034 410 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 FAM71BQ8TC56 605 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 VEZTQ9HBM0 779 aa7□□□□□ -1.29
LINC02397-201ENST00000504409 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 PEX19P40855 299 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CCDC152Q4G0S7 254 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 PLCB1Q9NQ66 1216 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 ASXL1Q8IXJ9 1541 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 PPFIBP2Q8ND30 876 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 ARHGAP45Q92619 1136 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 EVC2Q86UK5 1308 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 A0A087WUV0 522 aaPredicted RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CETN2P41208 172 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 HDAC9Q9UKV0 1011 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 LAMC1P11047 1609 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 TTC36A6NLP5 189 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 RAB11FIP3O75154 756 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 GTF2E1P29083 439 aaPredicted RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 MTMR3Q13615 1198 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 MMS22LQ6ZRQ5 1243 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 BLMP54132 1417 aaPredicted RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 ATAD2BQ9ULI0 1458 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 ZRANB2O95218 330 aaKnown RBP eCLIP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 MAGEA9P43362 315 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CCDC68Q9H2F9 335 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 EPRSP07814 1512 aaKnown RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 FAM135AQ9P2D6 1515 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 SETDB1Q15047 1291 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 L3MBTL2Q969R5 705 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CTAGE9A4FU28 777 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 NOL3O60936 208 aaKnown RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 ZFXP17010 805 aaPredicted RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CCDC27Q2M243 656 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 GPATCH11Q8N954 259 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CALR3Q96L12 384 aaKnown RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 EIF4G1Q04637 1599 aaKnown RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 EIF2S1P05198 315 aaKnown RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 SEPT7Q16181 437 aaKnown RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 C16orf45Q96MC5 204 aaPredicted RBP6.99□□□□□ -1.29
LINC02397-201ENST00000504409 MIS12Q9H081 205 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CYP46A1Q9Y6A2 500 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 SRGAP3O43295 1099 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 LMAN1P49257 510 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 ZSCAN23Q3MJ62 389 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 C3orf20Q8ND61 904 aa6.99□□□□□ -1.29
LINC02397-201ENST00000504409 CPLX1O14810 134 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 RNASELQ05823 741 aaKnown RBP6.98□□□□□ -1.29
LINC02397-201ENST00000504409 WHAMMQ8TF30 809 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 NUP133Q8WUM0 1156 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 KCNJ6P48051 423 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 CCDC158Q5M9N0 1113 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 Q9H521 79 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 EFCAB8A8MWE9 144 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 INPP5BP32019 993 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 SART3Q15020 963 aaKnown RBP6.98□□□□□ -1.29
LINC02397-201ENST00000504409 RUFY4Q6ZNE9 571 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 RPUSD2Q8IZ73 545 aaKnown RBP6.98□□□□□ -1.29
LINC02397-201ENST00000504409 RASSF8Q8NHQ8 419 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 DCAF11Q8TEB1 546 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 SIN3AQ96ST3 1273 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 DESP17661 470 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 ALDH3A1P30838 453 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 PLCB4Q15147 1175 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 RASAL2Q9UJF2 1139 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 MAPKBP1O60336 1514 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 ANKRD45Q5TZF3 282 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 AFAP1L1Q8TED9 768 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 SERPINC1P01008 464 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 NPHP3Q7Z494 1330 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 CTAGE15A4D2H0 777 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 CTAGE8P0CG41 777 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 KRT83P78385 493 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 CTAGE6Q86UF2 777 aa6.98□□□□□ -1.29
LINC02397-201ENST00000504409 CTAGE4Q8IX94 777 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms