RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
DHFR-202ENST00000504396 ERVV-2B6SEH9 535 aa12.43□□□□□ -0.42
DHFR-202ENST00000504396 PTCD1O75127 700 aaKnown RBP12.43□□□□□ -0.42
DHFR-202ENST00000504396 GYS1P13807 737 aa12.43□□□□□ -0.42
DHFR-202ENST00000504396 FOXK1P85037 733 aa12.43□□□□□ -0.42
DHFR-202ENST00000504396 DSG2Q14126 1118 aa12.43□□□□□ -0.42
DHFR-202ENST00000504396 PLEKHO1Q53GL0 409 aaPredicted RBP12.43□□□□□ -0.42
DHFR-202ENST00000504396 SLC4A9Q96Q91 983 aa12.43□□□□□ -0.42
DHFR-202ENST00000504396 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
DHFR-202ENST00000504396 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
DHFR-202ENST00000504396 WDR90Q96KV7 1748 aa12.42□□□□□ -0.42
DHFR-202ENST00000504396 RPS6KA4O75676 772 aa12.42□□□□□ -0.42
DHFR-202ENST00000504396 C1orf141Q5JVX7 400 aa12.42□□□□□ -0.42
DHFR-202ENST00000504396 C9orf131Q5VYM1 1079 aa12.42□□□□□ -0.42
DHFR-202ENST00000504396 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
DHFR-202ENST00000504396 SPRYD3Q8NCJ5 442 aa12.42□□□□□ -0.42
DHFR-202ENST00000504396 CRISPLD2Q9H0B8 497 aa12.42□□□□□ -0.42
DHFR-202ENST00000504396 MTHFSP49914 203 aa12.41□□□□□ -0.42
DHFR-202ENST00000504396 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
DHFR-202ENST00000504396 RC3H1Q5TC82 1133 aaKnown RBP12.41□□□□□ -0.42
DHFR-202ENST00000504396 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
DHFR-202ENST00000504396 KDM6AO15550 1401 aaPredicted RBP12.41□□□□□ -0.42
DHFR-202ENST00000504396 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
DHFR-202ENST00000504396 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
DHFR-202ENST00000504396 CRKLP46109 303 aaKnown RBP12.4□□□□□ -0.42
DHFR-202ENST00000504396 AMOTQ4VCS5 1084 aa12.4□□□□□ -0.42
DHFR-202ENST00000504396 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
DHFR-202ENST00000504396 RNF181Q9P0P0 153 aa12.4□□□□□ -0.42
DHFR-202ENST00000504396 PIM2Q9P1W9 311 aa12.4□□□□□ -0.42
DHFR-202ENST00000504396 SRP68Q9UHB9 627 aaKnown RBP12.4□□□□□ -0.42
DHFR-202ENST00000504396 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
DHFR-202ENST00000504396 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.43
DHFR-202ENST00000504396 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
DHFR-202ENST00000504396 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
DHFR-202ENST00000504396 CFAP44Q96MT7 982 aa12.39□□□□□ -0.43
DHFR-202ENST00000504396 MYH14Q7Z406 1995 aaKnown RBP12.39□□□□□ -0.43
DHFR-202ENST00000504396 KDM2BQ8NHM5 1336 aa12.39□□□□□ -0.43
DHFR-202ENST00000504396 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
DHFR-202ENST00000504396 CDAN1Q8IWY9 1227 aa12.38□□□□□ -0.43
DHFR-202ENST00000504396 RBM46Q8TBY0 533 aaKnown RBP12.38□□□□□ -0.43
DHFR-202ENST00000504396 TJP1Q07157 1748 aa12.38□□□□□ -0.43
DHFR-202ENST00000504396 PDE4AP27815 886 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 CHRNA5P30532 468 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 HTRA3P83110 453 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 NFATC2IPQ8NCF5 419 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 USP42Q9H9J4 1324 aaKnown RBP12.37□□□□□ -0.43
DHFR-202ENST00000504396 TNRC6CQ9HCJ0 1690 aaKnown RBP12.37□□□□□ -0.43
DHFR-202ENST00000504396 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 ZPR1O75312 459 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 SLC34A2O95436 690 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 DDR1Q08345 913 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 MORC1Q86VD1 984 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 HS3ST6Q96QI5 342 aa12.37□□□□□ -0.43
DHFR-202ENST00000504396 KCNA3P22001 575 aa12.36□□□□□ -0.43
DHFR-202ENST00000504396 SULT6B1Q6IMI4 303 aa12.36□□□□□ -0.43
DHFR-202ENST00000504396 DNAJC5GQ8N7S2 189 aa12.36□□□□□ -0.43
DHFR-202ENST00000504396 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
DHFR-202ENST00000504396 PANK3Q9H999 370 aa12.36□□□□□ -0.43
DHFR-202ENST00000504396 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
DHFR-202ENST00000504396 PCDH10Q9P2E7 1040 aa12.36□□□□□ -0.43
DHFR-202ENST00000504396 FSTL1Q12841 308 aa12.35□□□□□ -0.43
DHFR-202ENST00000504396 PPP1R15BQ5SWA1 713 aa12.35□□□□□ -0.43
DHFR-202ENST00000504396 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
DHFR-202ENST00000504396 SCN11AQ9UI33 1791 aa12.35□□□□□ -0.43
DHFR-202ENST00000504396 USPL1Q5W0Q7 1092 aa12.34□□□□□ -0.43
DHFR-202ENST00000504396 KLRG1Q96E93 195 aa12.34□□□□□ -0.43
DHFR-202ENST00000504396 POLRMTO00411 1230 aaKnown RBP12.33□□□□□ -0.44
DHFR-202ENST00000504396 RASSF7Q02833 373 aa12.33□□□□□ -0.44
DHFR-202ENST00000504396 DNAJC10Q8IXB1 793 aa12.33□□□□□ -0.44
DHFR-202ENST00000504396 SBF1O95248 1867 aa12.32□□□□□ -0.44
DHFR-202ENST00000504396 NUDT7P0C024 238 aa12.32□□□□□ -0.44
DHFR-202ENST00000504396 INTS5Q6P9B9 1019 aaKnown RBP12.32□□□□□ -0.44
DHFR-202ENST00000504396 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
DHFR-202ENST00000504396 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
DHFR-202ENST00000504396 COL15A1P39059 1388 aa12.31□□□□□ -0.44
DHFR-202ENST00000504396 EIF4G2P78344 907 aaKnown RBP eCLIP12.31□□□□□ -0.44
DHFR-202ENST00000504396 PCGF6Q9BYE7 350 aa12.31□□□□□ -0.44
DHFR-202ENST00000504396 AFDNP55196 1824 aaKnown RBP12.31□□□□□ -0.44
DHFR-202ENST00000504396 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
DHFR-202ENST00000504396 ADAMTS7Q9UKP4 1686 aa12.31□□□□□ -0.44
DHFR-202ENST00000504396 SOS1Q07889 1333 aaPredicted RBP12.3□□□□□ -0.44
DHFR-202ENST00000504396 HSPA5P11021 654 aaKnown RBP12.3□□□□□ -0.44
DHFR-202ENST00000504396 SLC39A6Q13433 755 aa12.3□□□□□ -0.44
DHFR-202ENST00000504396 AKAP4Q5JQC9 854 aa12.3□□□□□ -0.44
DHFR-202ENST00000504396 VARS2Q5ST30 1063 aaKnown RBP12.3□□□□□ -0.44
DHFR-202ENST00000504396 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
DHFR-202ENST00000504396 SLC52A2Q9HAB3 445 aa12.3□□□□□ -0.44
DHFR-202ENST00000504396 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
DHFR-202ENST00000504396 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
DHFR-202ENST00000504396 HMOX1P09601 288 aa12.29□□□□□ -0.44
DHFR-202ENST00000504396 TM4SF1P30408 202 aa12.29□□□□□ -0.44
DHFR-202ENST00000504396 NFIXQ14938 502 aa12.29□□□□□ -0.44
DHFR-202ENST00000504396 COL13A1Q5TAT6 717 aaPredicted RBP12.29□□□□□ -0.44
DHFR-202ENST00000504396 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
DHFR-202ENST00000504396 PTCD2Q8WV60 388 aaKnown RBP12.29□□□□□ -0.44
DHFR-202ENST00000504396 LMNB1P20700 586 aa12.28□□□□□ -0.44
DHFR-202ENST00000504396 CANXP27824 592 aaKnown RBP12.28□□□□□ -0.44
DHFR-202ENST00000504396 IL13P35225 146 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms