RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 NRAPQ86VF7 1730 aa26.28■■□□□ 1.8
UBE2D3-216ENST00000503742 IL1RAPL2Q9NP60 686 aa26.28■■□□□ 1.8
UBE2D3-216ENST00000503742 LRP6O75581 1613 aa26.28■■□□□ 1.8
UBE2D3-216ENST00000503742 PTCD1O75127 700 aaKnown RBP26.27■■□□□ 1.8
UBE2D3-216ENST00000503742 AFDNP55196 1824 aaKnown RBP26.27■■□□□ 1.8
UBE2D3-216ENST00000503742 BICC1Q9H694 974 aaKnown RBP26.27■■□□□ 1.8
UBE2D3-216ENST00000503742 TSHZ3Q63HK5 1081 aa26.26■■□□□ 1.79
UBE2D3-216ENST00000503742 PIGBQ92521 554 aa26.26■■□□□ 1.79
UBE2D3-216ENST00000503742 KIF2CQ99661 725 aa26.26■■□□□ 1.79
UBE2D3-216ENST00000503742 NUP188Q5SRE5 1749 aa26.25■■□□□ 1.79
UBE2D3-216ENST00000503742 A1BGP04217 495 aa26.25■■□□□ 1.79
UBE2D3-216ENST00000503742 CASC1Q6TDU7 716 aa26.25■■□□□ 1.79
UBE2D3-216ENST00000503742 COL15A1P39059 1388 aa26.24■■□□□ 1.79
UBE2D3-216ENST00000503742 VSIG10Q8N0Z9 540 aa26.23■■□□□ 1.79
UBE2D3-216ENST00000503742 EXOC5O00471 708 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 TOM1O60784 492 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 NUTM1Q86Y26 1132 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 ASAP1Q9ULH1 1129 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 ADAMTS2O95450 1211 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 NBR1Q14596 966 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 TTLL7Q6ZT98 887 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 ATG3Q9NT62 314 aa26.22■■□□□ 1.79
UBE2D3-216ENST00000503742 BCL9O00512 1426 aa26.21■■□□□ 1.79
UBE2D3-216ENST00000503742 USP26Q9BXU7 913 aa26.21■■□□□ 1.79
UBE2D3-216ENST00000503742 PA2G4Q9UQ80 394 aaKnown RBP26.21■■□□□ 1.79
UBE2D3-216ENST00000503742 ERC1Q8IUD2 1116 aa26.2■■□□□ 1.79
UBE2D3-216ENST00000503742 CDCA7Q9BWT1 371 aaPredicted RBP26.2■■□□□ 1.79
UBE2D3-216ENST00000503742 SPATA31A1Q5TZJ5 1347 aa26.2■■□□□ 1.79
UBE2D3-216ENST00000503742 USP42Q9H9J4 1324 aaKnown RBP26.2■■□□□ 1.79
UBE2D3-216ENST00000503742 OS9Q13438 667 aaPredicted RBP26.2■■□□□ 1.78
UBE2D3-216ENST00000503742 EPHA10Q5JZY3 1008 aa26.2■■□□□ 1.78
UBE2D3-216ENST00000503742 SNX21Q969T3 373 aa26.2■■□□□ 1.78
UBE2D3-216ENST00000503742 TEX13AQ9BXU3 409 aaPredicted RBP26.2■■□□□ 1.78
UBE2D3-216ENST00000503742 THRAP3Q9Y2W1 955 aaKnown RBP26.2■■□□□ 1.78
UBE2D3-216ENST00000503742 PI4K2BQ8TCG2 481 aa26.19■■□□□ 1.78
UBE2D3-216ENST00000503742 ATP5J2-PTCD1G3V325 749 aa26.18■■□□□ 1.78
UBE2D3-216ENST00000503742 CASP7P55210 303 aa26.18■■□□□ 1.78
UBE2D3-216ENST00000503742 NWD2Q9ULI1 1742 aa26.18■■□□□ 1.78
UBE2D3-216ENST00000503742 PIP4K2BP78356 416 aa26.17■■□□□ 1.78
UBE2D3-216ENST00000503742 RABL6Q3YEC7 729 aaPredicted RBP26.17■■□□□ 1.78
UBE2D3-216ENST00000503742 ERC2O15083 957 aa26.16■■□□□ 1.78
UBE2D3-216ENST00000503742 A0A087WZG4 1122 aa26.16■■□□□ 1.78
UBE2D3-216ENST00000503742 CLASRPQ8N2M8 674 aaKnown RBP26.16■■□□□ 1.78
UBE2D3-216ENST00000503742 ANTXR1Q9H6X2 564 aa26.16■■□□□ 1.78
UBE2D3-216ENST00000503742 TTC41PQ6P2S7 1318 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 REC8O95072 547 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 UBE3BQ7Z3V4 1068 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 UNC5CLQ8IV45 518 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 DNAJC10Q8IXB1 793 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 SLIT2O94813 1529 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 TRIM6-TRIM34B2RNG4 842 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 SASH1O94885 1247 aa26.15■■□□□ 1.78
UBE2D3-216ENST00000503742 TJP1Q07157 1748 aa26.14■■□□□ 1.78
UBE2D3-216ENST00000503742 H7C1W4 665 aa26.14■■□□□ 1.77
UBE2D3-216ENST00000503742 CHMLP26374 656 aa26.14■■□□□ 1.77
UBE2D3-216ENST00000503742 G3BP1Q13283 466 aaKnown RBP eCLIP26.14■■□□□ 1.77
UBE2D3-216ENST00000503742 HSCBQ8IWL3 235 aa26.14■■□□□ 1.77
UBE2D3-216ENST00000503742 JARID2Q92833 1246 aaPredicted RBP26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 RILPL2Q969X0 211 aa26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 SPATA31A5Q5VU36 1347 aa26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 SPATA31A7Q8IWB4 1347 aa26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 RFX5P48382 616 aaPredicted RBP26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 ESYT1Q9BSJ8 1104 aa26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 COPRSQ9NQ92 184 aa26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 AK9Q5TCS8 1911 aa26.13■■□□□ 1.77
UBE2D3-216ENST00000503742 DOT1LQ8TEK3 1739 aa26.12■■□□□ 1.77
UBE2D3-216ENST00000503742 NUTM2BA6NNL0 878 aaPredicted RBP26.12■■□□□ 1.77
UBE2D3-216ENST00000503742 NUTM2EB1AL46 878 aaPredicted RBP26.12■■□□□ 1.77
UBE2D3-216ENST00000503742 NUTM2AQ8IVF1 878 aaPredicted RBP26.12■■□□□ 1.77
UBE2D3-216ENST00000503742 CWC25Q9NXE8 425 aaPredicted RBP26.12■■□□□ 1.77
UBE2D3-216ENST00000503742 STARD3NLO95772 234 aa26.11■■□□□ 1.77
UBE2D3-216ENST00000503742 ZBTB3Q9H5J0 574 aa26.11■■□□□ 1.77
UBE2D3-216ENST00000503742 CCDC191Q8NCU4 936 aa26.11■■□□□ 1.77
UBE2D3-216ENST00000503742 SLC4A9Q96Q91 983 aa26.11■■□□□ 1.77
UBE2D3-216ENST00000503742 RBM42Q9BTD8 480 aaKnown RBP26.11■■□□□ 1.77
UBE2D3-216ENST00000503742 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.1■■□□□ 1.77
UBE2D3-216ENST00000503742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.1■■□□□ 1.77
UBE2D3-216ENST00000503742 GLRX3O76003 335 aaKnown RBP26.09■■□□□ 1.77
UBE2D3-216ENST00000503742 DDB1Q16531 1140 aa26.09■■□□□ 1.77
UBE2D3-216ENST00000503742 SLKQ9H2G2 1235 aaPredicted RBP26.09■■□□□ 1.77
UBE2D3-216ENST00000503742 KAT6BQ8WYB5 2073 aa26.09■■□□□ 1.77
UBE2D3-216ENST00000503742 KLHDC4Q8TBB5 520 aa26.09■■□□□ 1.77
UBE2D3-216ENST00000503742 IFIT2P09913 472 aaKnown RBP26.08■■□□□ 1.77
UBE2D3-216ENST00000503742 PTPN12Q05209 780 aaKnown RBP26.08■■□□□ 1.77
UBE2D3-216ENST00000503742 NFKBIBQ15653 356 aa26.08■■□□□ 1.77
UBE2D3-216ENST00000503742 BARGINQ6ZT62 677 aa26.08■■□□□ 1.77
UBE2D3-216ENST00000503742 ISCA1Q9BUE6 129 aa26.08■■□□□ 1.77
UBE2D3-216ENST00000503742 ECHDC1Q9NTX5 307 aa26.08■■□□□ 1.77
UBE2D3-216ENST00000503742 PRIM1P49642 420 aaKnown RBP26.07■■□□□ 1.76
UBE2D3-216ENST00000503742 FOXO4P98177 505 aa26.07■■□□□ 1.76
UBE2D3-216ENST00000503742 RABEP1Q15276 862 aa26.07■■□□□ 1.76
UBE2D3-216ENST00000503742 EAF2Q96CJ1 260 aaPredicted RBP26.07■■□□□ 1.76
UBE2D3-216ENST00000503742 AACSQ86V21 672 aa26.07■■□□□ 1.76
UBE2D3-216ENST00000503742 SIL1Q9H173 461 aa26.07■■□□□ 1.76
UBE2D3-216ENST00000503742 UBAP1LF5GYI3 381 aa26.06■■□□□ 1.76
UBE2D3-216ENST00000503742 CYP19A1P11511 503 aaPredicted RBP26.06■■□□□ 1.76
UBE2D3-216ENST00000503742 CNTROBQ8N137 903 aa26.06■■□□□ 1.76
UBE2D3-216ENST00000503742 GPATCH3Q96I76 525 aa26.06■■□□□ 1.76
UBE2D3-216ENST00000503742 CD2BP2O95400 341 aaKnown RBP26.06■■□□□ 1.76
UBE2D3-216ENST00000503742 TCIRG1Q13488 830 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms