RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 TRMT2AQ8IZ69 625 aaKnown RBP21.26■□□□□ 0.99
SCLT1-205ENST00000503401 XAGE3Q8WTP9 111 aa21.26■□□□□ 0.99
SCLT1-205ENST00000503401 PPP1R1BQ9UD71 204 aaPredicted RBP21.26■□□□□ 0.99
SCLT1-205ENST00000503401 BICDL1Q6ZP65 573 aa21.25■□□□□ 0.99
SCLT1-205ENST00000503401 ZBTB3Q9H5J0 574 aa21.25■□□□□ 0.99
SCLT1-205ENST00000503401 NUP98P52948 1817 aa21.25■□□□□ 0.99
SCLT1-205ENST00000503401 ZBED9Q6R2W3 1325 aa21.25■□□□□ 0.99
SCLT1-205ENST00000503401 HLFQ16534 295 aa21.24■□□□□ 0.99
SCLT1-205ENST00000503401 KIF6Q6ZMV9 814 aa21.24■□□□□ 0.99
SCLT1-205ENST00000503401 TBC1D9BQ66K14 1250 aa21.23■□□□□ 0.99
SCLT1-205ENST00000503401 PHAXQ9H814 394 aaKnown RBP21.23■□□□□ 0.99
SCLT1-205ENST00000503401 DDR1Q08345 913 aa21.22■□□□□ 0.99
SCLT1-205ENST00000503401 NFIXQ14938 502 aa21.22■□□□□ 0.99
SCLT1-205ENST00000503401 HYPKQ9NX55 129 aa21.22■□□□□ 0.99
SCLT1-205ENST00000503401 MAP3K15Q6ZN16 1313 aa21.22■□□□□ 0.99
SCLT1-205ENST00000503401 STK31Q9BXU1 1019 aa21.22■□□□□ 0.99
SCLT1-205ENST00000503401 TM4SF1P30408 202 aa21.21■□□□□ 0.99
SCLT1-205ENST00000503401 KLHL34Q8N239 644 aa21.21■□□□□ 0.99
SCLT1-205ENST00000503401 SLC4A2P04920 1241 aa21.2■□□□□ 0.98
SCLT1-205ENST00000503401 CACNA1FO60840 1977 aa21.2■□□□□ 0.98
SCLT1-205ENST00000503401 AFDNP55196 1824 aaKnown RBP21.2■□□□□ 0.98
SCLT1-205ENST00000503401 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
SCLT1-205ENST00000503401 CHMP4AQ9BY43 222 aa21.19■□□□□ 0.98
SCLT1-205ENST00000503401 ZNF652Q9Y2D9 606 aa21.19■□□□□ 0.98
SCLT1-205ENST00000503401 PARP3Q9Y6F1 533 aa21.19■□□□□ 0.98
SCLT1-205ENST00000503401 ERVV-1B6SEH8 477 aa21.18■□□□□ 0.98
SCLT1-205ENST00000503401 POLRMTO00411 1230 aaKnown RBP21.18■□□□□ 0.98
SCLT1-205ENST00000503401 CLEC4GQ6UXB4 293 aa21.18■□□□□ 0.98
SCLT1-205ENST00000503401 G2E3Q7L622 706 aa21.18■□□□□ 0.98
SCLT1-205ENST00000503401 FHDC1Q9C0D6 1143 aaPredicted RBP21.18■□□□□ 0.98
SCLT1-205ENST00000503401 SETDB2Q96T68 719 aa21.17■□□□□ 0.98
SCLT1-205ENST00000503401 NIP7Q9Y221 180 aaKnown RBP eCLIP21.17■□□□□ 0.98
SCLT1-205ENST00000503401 ARFGEF2Q9Y6D5 1785 aa21.16■□□□□ 0.98
SCLT1-205ENST00000503401 GPTP24298 496 aa21.16■□□□□ 0.98
SCLT1-205ENST00000503401 ANKRD13DQ6ZTN6 518 aa21.16■□□□□ 0.98
SCLT1-205ENST00000503401 GIGYF2Q6Y7W6 1299 aaKnown RBP21.15■□□□□ 0.98
SCLT1-205ENST00000503401 UTRNP46939 3433 aa21.15■□□□□ 0.98
SCLT1-205ENST00000503401 ANKRD36CQ5JPF3 1778 aa21.15■□□□□ 0.98
SCLT1-205ENST00000503401 FAM177BA6PVY3 158 aa21.15■□□□□ 0.98
SCLT1-205ENST00000503401 SERPINB2P05120 415 aa21.15■□□□□ 0.98
SCLT1-205ENST00000503401 PLBD2Q8NHP8 589 aa21.15■□□□□ 0.98
SCLT1-205ENST00000503401 BCL2L13Q9BXK5 485 aa21.15■□□□□ 0.98
SCLT1-205ENST00000503401 CARMIL3Q8ND23 1372 aa21.14■□□□□ 0.98
SCLT1-205ENST00000503401 ZNF428Q96B54 188 aa21.14■□□□□ 0.97
SCLT1-205ENST00000503401 NRXN2Q9P2S2 1712 aa21.13■□□□□ 0.97
SCLT1-205ENST00000503401 ATP10DQ9P241 1426 aa21.13■□□□□ 0.97
SCLT1-205ENST00000503401 RGL2O15211 777 aa21.13■□□□□ 0.97
SCLT1-205ENST00000503401 FLIIQ13045 1269 aa21.13■□□□□ 0.97
SCLT1-205ENST00000503401 RIC3Q7Z5B4 369 aa21.13■□□□□ 0.97
SCLT1-205ENST00000503401 CCDC24Q8N4L8 307 aa21.13■□□□□ 0.97
SCLT1-205ENST00000503401 UBN2Q6ZU65 1347 aa21.13■□□□□ 0.97
SCLT1-205ENST00000503401 SSH1Q8WYL5 1049 aa21.12■□□□□ 0.97
SCLT1-205ENST00000503401 ZNF34Q8IZ26 560 aa21.11■□□□□ 0.97
SCLT1-205ENST00000503401 SYT17Q9BSW7 474 aa21.11■□□□□ 0.97
SCLT1-205ENST00000503401 KIF13BQ9NQT8 1826 aa21.11■□□□□ 0.97
SCLT1-205ENST00000503401 PI4KAP2A4QPH2 592 aa21.11■□□□□ 0.97
SCLT1-205ENST00000503401 FKBP5Q13451 457 aaPredicted RBP21.11■□□□□ 0.97
SCLT1-205ENST00000503401 TCIRG1Q13488 830 aa21.11■□□□□ 0.97
SCLT1-205ENST00000503401 PI4KAP1Q8N8J0 262 aa21.11■□□□□ 0.97
SCLT1-205ENST00000503401 NLGN2Q8NFZ4 835 aa21.11■□□□□ 0.97
SCLT1-205ENST00000503401 C10orf71Q711Q0 1435 aa21.1■□□□□ 0.97
SCLT1-205ENST00000503401 ADCY9O60503 1353 aa21.1■□□□□ 0.97
SCLT1-205ENST00000503401 ATP5J2-PTCD1G3V325 749 aa21.1■□□□□ 0.97
SCLT1-205ENST00000503401 DDX58O95786 925 aaKnown RBP21.1■□□□□ 0.97
SCLT1-205ENST00000503401 NBPF5PQ86XG9 351 aaPredicted RBP21.1■□□□□ 0.97
SCLT1-205ENST00000503401 MRPL50Q8N5N7 158 aaKnown RBP21.1■□□□□ 0.97
SCLT1-205ENST00000503401 MAP3K2Q9Y2U5 619 aa21.1■□□□□ 0.97
SCLT1-205ENST00000503401 NPHP1O15259 732 aa21.09■□□□□ 0.97
SCLT1-205ENST00000503401 PRR5LQ6MZQ0 368 aa21.09■□□□□ 0.97
SCLT1-205ENST00000503401 N4BP2Q86UW6 1770 aaPredicted RBP21.08■□□□□ 0.97
SCLT1-205ENST00000503401 CT47B1P0C2W7 299 aaPredicted RBP21.08■□□□□ 0.97
SCLT1-205ENST00000503401 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
SCLT1-205ENST00000503401 SUSD4Q5VX71 490 aa21.08■□□□□ 0.97
SCLT1-205ENST00000503401 KSR2Q6VAB6 950 aa21.08■□□□□ 0.97
SCLT1-205ENST00000503401 CNBD1Q8NA66 436 aa21.08■□□□□ 0.97
SCLT1-205ENST00000503401 MYD88Q99836 296 aa21.08■□□□□ 0.97
SCLT1-205ENST00000503401 SMC4Q9NTJ3 1288 aa21.08■□□□□ 0.97
SCLT1-205ENST00000503401 CD2APQ9Y5K6 639 aa21.08■□□□□ 0.97
SCLT1-205ENST00000503401 ANKRD31Q8N7Z5 1873 aa21.07■□□□□ 0.96
SCLT1-205ENST00000503401 ALDH1L2Q3SY69 923 aa21.07■□□□□ 0.96
SCLT1-205ENST00000503401 NUTM1Q86Y26 1132 aa21.07■□□□□ 0.96
SCLT1-205ENST00000503401 F6X3S4 739 aa21.06■□□□□ 0.96
SCLT1-205ENST00000503401 RARSP54136 660 aaKnown RBP21.06■□□□□ 0.96
SCLT1-205ENST00000503401 NLRP10Q86W26 655 aa21.06■□□□□ 0.96
SCLT1-205ENST00000503401 ISCA1Q9BUE6 129 aa21.06■□□□□ 0.96
SCLT1-205ENST00000503401 WWC3Q9ULE0 1092 aa21.06■□□□□ 0.96
SCLT1-205ENST00000503401 KIAA1551Q9HCM1 1747 aa21.06■□□□□ 0.96
SCLT1-205ENST00000503401 TPTE2Q6XPS3 522 aa21.05■□□□□ 0.96
SCLT1-205ENST00000503401 METTL22Q9BUU2 404 aaPredicted RBP21.05■□□□□ 0.96
SCLT1-205ENST00000503401 NTSR2O95665 410 aa21.04■□□□□ 0.96
SCLT1-205ENST00000503401 PARP10Q53GL7 1025 aa21.04■□□□□ 0.96
SCLT1-205ENST00000503401 GTF2E1P29083 439 aaPredicted RBP21.04■□□□□ 0.96
SCLT1-205ENST00000503401 ST5P78524 1137 aa21.04■□□□□ 0.96
SCLT1-205ENST00000503401 ERFEQ4G0M1 354 aa21.04■□□□□ 0.96
SCLT1-205ENST00000503401 PXDNLA1KZ92 1463 aa21.03■□□□□ 0.96
SCLT1-205ENST00000503401 A0A0G2JLW4 131 aa21.03■□□□□ 0.96
SCLT1-205ENST00000503401 CHRNA5P30532 468 aa21.03■□□□□ 0.96
SCLT1-205ENST00000503401 PPP1R42Q7Z4L9 355 aa21.03■□□□□ 0.96
SCLT1-205ENST00000503401 SYNE4Q8N205 404 aa21.03■□□□□ 0.96
SCLT1-205ENST00000503401 DNAAF4Q8WXU2 420 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms