RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 BCL11BQ9C0K0 894 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-202ENST00000503338 USP44Q9H0E7 712 aa10.17□□□□□ -0.78
TOPBP1-202ENST00000503338 C9orf78Q9NZ63 289 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-202ENST00000503338 ZNF831Q5JPB2 1677 aa10.17□□□□□ -0.78
TOPBP1-202ENST00000503338 NHSQ6T4R5 1651 aa10.17□□□□□ -0.78
TOPBP1-202ENST00000503338 UTYO14607 1347 aa10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 A0A087WZG4 1122 aa10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 RGL2O15211 777 aa10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 MAPK8IP2Q13387 824 aaPredicted RBP10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 CEP85Q6P2H3 762 aa10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 SMC5Q8IY18 1101 aa10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 SLC4A9Q96Q91 983 aa10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
TOPBP1-202ENST00000503338 NEURL1BA8MQ27 555 aa10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 ERVV-1B6SEH8 477 aa10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 GRM8O00222 908 aa10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 NPM3O75607 178 aaKnown RBP10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 TRIM28Q13263 835 aaKnown RBP10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 RC3H1Q5TC82 1133 aaKnown RBP10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 CCDC191Q8NCU4 936 aa10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 MYD88Q99836 296 aa10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
TOPBP1-202ENST00000503338 COL15A1P39059 1388 aa10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 MAP3K15Q6ZN16 1313 aa10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 CNTNAP4Q9C0A0 1308 aa10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 CRKLP46109 303 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 ATP8B2P98198 1209 aa10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 GCKRQ14397 625 aa10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 C1orf115Q9H7X2 142 aa10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 ZBTB1Q9Y2K1 713 aa10.14□□□□□ -0.79
TOPBP1-202ENST00000503338 IGKV5-2P06315 115 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 PIP4K2AP48426 406 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 EIF5P55010 431 aaKnown RBP10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 TCIRG1Q13488 830 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 MTX1Q13505 466 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 HSP90AB4PQ58FF6 505 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 SLC27A3Q5K4L6 730 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 GIGYF2Q6Y7W6 1299 aaKnown RBP10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 TTLL7Q6ZT98 887 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 DCTPP1Q9H773 170 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 CWC25Q9NXE8 425 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 CCNL1Q9UK58 526 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 LRRFIP2Q9Y608 721 aaKnown RBP10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 TJP1Q07157 1748 aa10.13□□□□□ -0.79
TOPBP1-202ENST00000503338 ITPK1Q13572 414 aa10.12□□□□□ -0.79
TOPBP1-202ENST00000503338 CWF19L2Q2TBE0 894 aaKnown RBP10.12□□□□□ -0.79
TOPBP1-202ENST00000503338 INTS5Q6P9B9 1019 aaKnown RBP10.12□□□□□ -0.79
TOPBP1-202ENST00000503338 DZIP3Q86Y13 1208 aaKnown RBP10.12□□□□□ -0.79
TOPBP1-202ENST00000503338 SIRT2Q8IXJ6 389 aa10.12□□□□□ -0.79
TOPBP1-202ENST00000503338 ZNF652Q9Y2D9 606 aa10.12□□□□□ -0.79
TOPBP1-202ENST00000503338 NBPF7P0C2Y1 421 aaPredicted RBP10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 HSP90B1P14625 803 aaKnown RBP10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 NUCB1Q02818 461 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 CLEC4GQ6UXB4 293 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 SSH3Q8TE77 659 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 CNKSR2Q8WXI2 1034 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 ISCA1Q9BUE6 129 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 ZBTB3Q9H5J0 574 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 PDZRN3Q9UPQ7 1066 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 BTAF1O14981 1849 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 RREB1Q92766 1687 aa10.11□□□□□ -0.79
TOPBP1-202ENST00000503338 SBF2Q86WG5 1849 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 H7C1W4 665 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 RAB11FIP3O75154 756 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 RPS6KA4O75676 772 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 POLA2Q14181 598 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 PARP10Q53GL7 1025 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 FAM182BQ5T319 152 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 CHD1LQ86WJ1 897 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 ARXQ96QS3 562 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 ARFGEF2Q9Y6D5 1785 aa10.1□□□□□ -0.79
TOPBP1-202ENST00000503338 ATP5J2-PTCD1G3V325 749 aa10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 PLSCR1O15162 318 aa10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 SRGAP3O43295 1099 aa10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 PCCAP05165 728 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 ANKRD45Q5TZF3 282 aa10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 PPP1R42Q7Z4L9 355 aa10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 ZBTB38Q8NAP3 1195 aaPredicted RBP10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 RTCBQ9Y3I0 505 aaKnown RBP10.09□□□□□ -0.79
TOPBP1-202ENST00000503338 COL5A3P25940 1745 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 NUP188Q5SRE5 1749 aa10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 TRIM37O94972 964 aa10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 RABL6Q3YEC7 729 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 UBE3BQ7Z3V4 1068 aa10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 ERC1Q8IUD2 1116 aa10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 SUCLG2Q96I99 432 aa10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 AK7Q96M32 723 aa10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 RGS17Q9UGC6 210 aaPredicted RBP10.08□□□□□ -0.8
TOPBP1-202ENST00000503338 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 LY75O60449 1722 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 PNMA6EA0A0J9YXQ4 647 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 CAMTA2O94983 1202 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 RGS3P49796 1198 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 CASP7P55210 303 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 PTF1AQ7RTS3 328 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 NLRP10Q86W26 655 aa10.07□□□□□ -0.8
TOPBP1-202ENST00000503338 ZNF34Q8IZ26 560 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms