RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 C10orf71Q711Q0 1435 aa28.44■■■□□ 2.14
UBE2D3-214ENST00000503282 ERVV-1B6SEH8 477 aa28.44■■■□□ 2.14
UBE2D3-214ENST00000503282 PROSER3Q2NL68 480 aa28.44■■■□□ 2.14
UBE2D3-214ENST00000503282 C8orf58Q8NAV2 365 aa28.44■■■□□ 2.14
UBE2D3-214ENST00000503282 DBF4Q9UBU7 674 aaPredicted RBP28.44■■■□□ 2.14
UBE2D3-214ENST00000503282 MAP3K15Q6ZN16 1313 aa28.43■■■□□ 2.14
UBE2D3-214ENST00000503282 CARMIL3Q8ND23 1372 aa28.43■■■□□ 2.14
UBE2D3-214ENST00000503282 HLFQ16534 295 aa28.43■■■□□ 2.14
UBE2D3-214ENST00000503282 CHMP4AQ9BY43 222 aa28.43■■■□□ 2.14
UBE2D3-214ENST00000503282 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
UBE2D3-214ENST00000503282 LRP10Q7Z4F1 713 aa28.42■■■□□ 2.14
UBE2D3-214ENST00000503282 ZBTB3Q9H5J0 574 aa28.42■■■□□ 2.14
UBE2D3-214ENST00000503282 KIF13BQ9NQT8 1826 aa28.41■■■□□ 2.14
UBE2D3-214ENST00000503282 NPHP1O15259 732 aa28.41■■■□□ 2.14
UBE2D3-214ENST00000503282 COPS6Q7L5N1 327 aa28.41■■■□□ 2.14
UBE2D3-214ENST00000503282 NIP7Q9Y221 180 aaKnown RBP eCLIP28.41■■■□□ 2.14
UBE2D3-214ENST00000503282 A0A0G2JLW4 131 aa28.4■■■□□ 2.14
UBE2D3-214ENST00000503282 AIMP1Q12904 312 aaKnown RBP28.4■■■□□ 2.14
UBE2D3-214ENST00000503282 AFDNP55196 1824 aaKnown RBP28.39■■■□□ 2.14
UBE2D3-214ENST00000503282 XAGE3Q8WTP9 111 aa28.39■■■□□ 2.14
UBE2D3-214ENST00000503282 GOLGA2Q08379 1002 aa28.38■■■□□ 2.13
UBE2D3-214ENST00000503282 TSPYL6Q8N831 410 aa28.38■■■□□ 2.13
UBE2D3-214ENST00000503282 HYPKQ9NX55 129 aa28.38■■■□□ 2.13
UBE2D3-214ENST00000503282 DPEP1P16444 411 aa28.37■■■□□ 2.13
UBE2D3-214ENST00000503282 CCDC30Q5VVM6 783 aa28.37■■■□□ 2.13
UBE2D3-214ENST00000503282 MYH16Q9H6N6 1097 aa28.37■■■□□ 2.13
UBE2D3-214ENST00000503282 PXDNLA1KZ92 1463 aa28.37■■■□□ 2.13
UBE2D3-214ENST00000503282 NRXN2Q9P2S2 1712 aa28.37■■■□□ 2.13
UBE2D3-214ENST00000503282 FANCIQ9NVI1 1328 aa28.37■■■□□ 2.13
UBE2D3-214ENST00000503282 TWISTNBQ3B726 338 aaPredicted RBP28.36■■■□□ 2.13
UBE2D3-214ENST00000503282 PRR5LQ6MZQ0 368 aa28.36■■■□□ 2.13
UBE2D3-214ENST00000503282 GIGYF2Q6Y7W6 1299 aaKnown RBP28.36■■■□□ 2.13
UBE2D3-214ENST00000503282 NBPF5PQ86XG9 351 aaPredicted RBP28.36■■■□□ 2.13
UBE2D3-214ENST00000503282 CNBD1Q8NA66 436 aa28.36■■■□□ 2.13
UBE2D3-214ENST00000503282 WWC3Q9ULE0 1092 aa28.36■■■□□ 2.13
UBE2D3-214ENST00000503282 TPTE2Q6XPS3 522 aa28.35■■■□□ 2.13
UBE2D3-214ENST00000503282 ST5P78524 1137 aa28.34■■■□□ 2.13
UBE2D3-214ENST00000503282 SPINK5Q9NQ38 1064 aaPredicted RBP28.34■■■□□ 2.13
UBE2D3-214ENST00000503282 N4BP2Q86UW6 1770 aaPredicted RBP28.34■■■□□ 2.13
UBE2D3-214ENST00000503282 NUP98P52948 1817 aa28.34■■■□□ 2.13
UBE2D3-214ENST00000503282 FAM177BA6PVY3 158 aa28.33■■■□□ 2.13
UBE2D3-214ENST00000503282 GRIN3BO60391 1043 aa28.33■■■□□ 2.13
UBE2D3-214ENST00000503282 YBX3P16989 372 aaKnown RBP eCLIP28.33■■■□□ 2.13
UBE2D3-214ENST00000503282 BRIP1Q9BX63 1249 aa28.33■■■□□ 2.13
UBE2D3-214ENST00000503282 ZNF521Q96K83 1311 aa28.33■■■□□ 2.13
UBE2D3-214ENST00000503282 CCDC24Q8N4L8 307 aa28.32■■■□□ 2.12
UBE2D3-214ENST00000503282 PIM2Q9P1W9 311 aa28.32■■■□□ 2.12
UBE2D3-214ENST00000503282 KCNA3P22001 575 aa28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 GPTP24298 496 aa28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 GTF2E1P29083 439 aaPredicted RBP28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 CHRNA5P30532 468 aa28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 PDE6BP35913 854 aa28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 EXOSC9Q06265 439 aaKnown RBP28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 ANKRD13DQ6ZTN6 518 aa28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 ATP10DQ9P241 1426 aa28.31■■■□□ 2.12
UBE2D3-214ENST00000503282 KIAA1551Q9HCM1 1747 aa28.3■■■□□ 2.12
UBE2D3-214ENST00000503282 H0YIN7 160 aa28.3■■■□□ 2.12
UBE2D3-214ENST00000503282 HSP90AB3PQ58FF7 597 aa28.3■■■□□ 2.12
UBE2D3-214ENST00000503282 ZNF34Q8IZ26 560 aa28.3■■■□□ 2.12
UBE2D3-214ENST00000503282 STK31Q9BXU1 1019 aa28.3■■■□□ 2.12
UBE2D3-214ENST00000503282 NYXQ9GZU5 481 aa28.3■■■□□ 2.12
UBE2D3-214ENST00000503282 PLBD2Q8NHP8 589 aa28.29■■■□□ 2.12
UBE2D3-214ENST00000503282 BCS1LQ9Y276 419 aa28.29■■■□□ 2.12
UBE2D3-214ENST00000503282 C2CD5Q86YS7 1000 aa28.28■■■□□ 2.12
UBE2D3-214ENST00000503282 PHAXQ9H814 394 aaKnown RBP28.28■■■□□ 2.12
UBE2D3-214ENST00000503282 PDZRN3Q9UPQ7 1066 aa28.28■■■□□ 2.12
UBE2D3-214ENST00000503282 GOLGB1Q14789 3259 aaKnown RBP28.27■■■□□ 2.12
UBE2D3-214ENST00000503282 TCERG1O14776 1098 aaKnown RBP28.26■■■□□ 2.11
UBE2D3-214ENST00000503282 TCIRG1Q13488 830 aa28.26■■■□□ 2.11
UBE2D3-214ENST00000503282 PARP10Q53GL7 1025 aa28.26■■■□□ 2.11
UBE2D3-214ENST00000503282 PPP1R42Q7Z4L9 355 aa28.26■■■□□ 2.11
UBE2D3-214ENST00000503282 UBN2Q6ZU65 1347 aa28.25■■■□□ 2.11
UBE2D3-214ENST00000503282 VAMP4O75379 141 aa28.25■■■□□ 2.11
UBE2D3-214ENST00000503282 DALRD3Q5D0E6 543 aaKnown RBP28.25■■■□□ 2.11
UBE2D3-214ENST00000503282 SUSD4Q5VX71 490 aa28.25■■■□□ 2.11
UBE2D3-214ENST00000503282 E9PSI1 815 aa28.24■■■□□ 2.11
UBE2D3-214ENST00000503282 RIC3Q7Z5B4 369 aa28.24■■■□□ 2.11
UBE2D3-214ENST00000503282 DDX58O95786 925 aaKnown RBP28.23■■■□□ 2.11
UBE2D3-214ENST00000503282 SLC4A2P04920 1241 aa28.23■■■□□ 2.11
UBE2D3-214ENST00000503282 UTRNP46939 3433 aa28.23■■■□□ 2.11
UBE2D3-214ENST00000503282 NUTM1Q86Y26 1132 aa28.22■■■□□ 2.11
UBE2D3-214ENST00000503282 ZNF622Q969S3 477 aaKnown RBP eCLIP28.22■■■□□ 2.11
UBE2D3-214ENST00000503282 ANKRD31Q8N7Z5 1873 aa28.21■■■□□ 2.11
UBE2D3-214ENST00000503282 UTP14AQ9BVJ6 771 aaKnown RBP28.21■■■□□ 2.11
UBE2D3-214ENST00000503282 IBTKQ9P2D0 1353 aaPredicted RBP28.21■■■□□ 2.11
UBE2D3-214ENST00000503282 SLFN5Q08AF3 891 aa28.2■■■□□ 2.1
UBE2D3-214ENST00000503282 ERFEQ4G0M1 354 aa28.2■■■□□ 2.1
UBE2D3-214ENST00000503282 TTLL6Q8N841 843 aa28.2■■■□□ 2.1
UBE2D3-214ENST00000503282 BRCA1P38398 1863 aaKnown RBP28.2■■■□□ 2.1
UBE2D3-214ENST00000503282 NTSR2O95665 410 aa28.19■■■□□ 2.1
UBE2D3-214ENST00000503282 NLRP10Q86W26 655 aa28.19■■■□□ 2.1
UBE2D3-214ENST00000503282 YY1P25490 414 aa28.18■■■□□ 2.1
UBE2D3-214ENST00000503282 ANKRD36CQ5JPF3 1778 aa28.17■■■□□ 2.1
UBE2D3-214ENST00000503282 SRGNP10124 158 aa28.17■■■□□ 2.1
UBE2D3-214ENST00000503282 CDCA7LQ96GN5 454 aa28.17■■■□□ 2.1
UBE2D3-214ENST00000503282 MASTLQ96GX5 879 aa28.17■■■□□ 2.1
UBE2D3-214ENST00000503282 KLRG2A4D1S0 409 aaPredicted RBP28.16■■■□□ 2.1
UBE2D3-214ENST00000503282 ATP5J2-PTCD1G3V325 749 aa28.16■■■□□ 2.1
UBE2D3-214ENST00000503282 STYK1Q6J9G0 422 aa28.16■■■□□ 2.1
UBE2D3-214ENST00000503282 ARHGAP27Q6ZUM4 889 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms