RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 CRBNQ96SW2 442 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 PHF23Q9BUL5 403 aaPredicted RBP12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 EIF2AQ9BY44 585 aaKnown RBP12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 SCAND2PQ9GZW5 306 aaPredicted RBP12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 KRT222Q8N1A0 295 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 CCT6BQ92526 530 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 MIA2Q96PC5 1412 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 ATP5DP30049 168 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 GIPC1O14908 333 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 TBC1D31Q96DN5 1066 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 TTC39AQ5SRH9 613 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 PRPF4BQ13523 1007 aaKnown RBP12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 BLOC1S2Q6QNY1 142 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 MIER3Q7Z3K6 550 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 HAUS2Q9NVX0 235 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 ERCC5P28715 1186 aaPredicted RBP12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC30Q5VVM6 783 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 VPS52Q8N1B4 723 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 TSPYL4Q9UJ04 414 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 CUX1P39880 1505 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 CHMP2AO43633 222 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 B4GALNT4Q76KP1 1039 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 PFDN4Q9NQP4 134 aa12.82□□□□□ -0.36
AC055713.1-201ENST00000498967 SYNCQ9H7C4 482 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 GBP1P32455 592 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 JADE2Q9NQC1 790 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 SAMD15Q9P1V8 674 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC63Q8NA47 563 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC96Q2M329 555 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 IL27Q8NEV9 243 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 PLIN1O60240 522 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 CNNM1Q9NRU3 951 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
AC055713.1-201ENST00000498967 ZNF526Q8TF50 670 aaPredicted RBP12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 STX6O43752 255 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 NAA25Q14CX7 972 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 ZNF365Q70YC5 407 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 SPC25Q9HBM1 224 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 WHAMMP3Q1A5X7 153 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 CUL5Q93034 780 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 FANCD2Q9BXW9 1451 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 PLEKHH1Q9ULM0 1364 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 MSANTD4Q8NCY6 345 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 NEDD9Q14511 834 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 KLHL10Q6JEL2 608 aa12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 NAA16Q6N069 864 aaPredicted RBP12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 PSPC1Q8WXF1 523 aaKnown RBP12.8□□□□□ -0.36
AC055713.1-201ENST00000498967 RIPK4P57078 832 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 PIP4K2BP78356 416 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 PSME1Q06323 249 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 ATRIPQ8WXE1 791 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 SRRTQ9BXP5 876 aaKnown RBP12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC7Q96M83 1385 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 CPLX4Q7Z7G2 160 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC114Q96M63 670 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 GIMAP4Q9NUV9 329 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC12Q8WUD4 166 aaPredicted RBP12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
AC055713.1-201ENST00000498967 A0A087WZG4 1122 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 LMBR1Q8WVP7 490 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 SEC62Q99442 399 aaKnown RBP12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 K7ELQ4 463 aaPredicted RBP12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 PCK1P35558 622 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 SDCCAG8Q86SQ7 713 aaPredicted RBP12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 INPP1P49441 399 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 BICDL2A1A5D9 508 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 GNAI2P04899 355 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 CUL4BQ13620 913 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
AC055713.1-201ENST00000498967 FLIIQ13045 1269 aa12.77□□□□□ -0.36
AC055713.1-201ENST00000498967 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.36
AC055713.1-201ENST00000498967 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.36
AC055713.1-201ENST00000498967 PDCD2Q16342 344 aaPredicted RBP12.77□□□□□ -0.36
AC055713.1-201ENST00000498967 HDAC9Q9UKV0 1011 aa12.77□□□□□ -0.37
AC055713.1-201ENST00000498967 WDR46O15213 610 aaKnown RBP12.77□□□□□ -0.37
AC055713.1-201ENST00000498967 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.37
AC055713.1-201ENST00000498967 CRCPO75575 148 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 ANKRD24Q8TF21 1146 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 RNF8O76064 485 aa12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 PDE1CQ14123 709 aaPredicted RBP12.76□□□□□ -0.37
AC055713.1-201ENST00000498967 SRGAP1Q7Z6B7 1085 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms