RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 PROSER3Q2NL68 480 aa20.54■□□□□ 0.88
SSBP1-214ENST00000498107 LRP10Q7Z4F1 713 aa20.54■□□□□ 0.88
SSBP1-214ENST00000498107 ZNF428Q96B54 188 aa20.54■□□□□ 0.88
SSBP1-214ENST00000498107 MAP3K15Q6ZN16 1313 aa20.53■□□□□ 0.88
SSBP1-214ENST00000498107 ANXA1P04083 346 aa20.53■□□□□ 0.88
SSBP1-214ENST00000498107 MMP10P09238 476 aa20.53■□□□□ 0.88
SSBP1-214ENST00000498107 CT47B1P0C2W7 299 aaPredicted RBP20.53■□□□□ 0.88
SSBP1-214ENST00000498107 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
SSBP1-214ENST00000498107 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
SSBP1-214ENST00000498107 CACNA1FO60840 1977 aa20.53■□□□□ 0.88
SSBP1-214ENST00000498107 XAGE3Q8WTP9 111 aa20.52■□□□□ 0.88
SSBP1-214ENST00000498107 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.88
SSBP1-214ENST00000498107 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
SSBP1-214ENST00000498107 AIMP1Q12904 312 aaKnown RBP20.51■□□□□ 0.87
SSBP1-214ENST00000498107 TTLL7Q6ZT98 887 aa20.51■□□□□ 0.87
SSBP1-214ENST00000498107 DDX58O95786 925 aaKnown RBP20.5■□□□□ 0.87
SSBP1-214ENST00000498107 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
SSBP1-214ENST00000498107 TM4SF1P30408 202 aa20.5■□□□□ 0.87
SSBP1-214ENST00000498107 NFIXQ14938 502 aa20.49■□□□□ 0.87
SSBP1-214ENST00000498107 HSP90AB3PQ58FF7 597 aa20.49■□□□□ 0.87
SSBP1-214ENST00000498107 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
SSBP1-214ENST00000498107 ZBTB3Q9H5J0 574 aa20.49■□□□□ 0.87
SSBP1-214ENST00000498107 GIGYF2Q6Y7W6 1299 aaKnown RBP20.48■□□□□ 0.87
SSBP1-214ENST00000498107 ANKRD13DQ6ZTN6 518 aa20.48■□□□□ 0.87
SSBP1-214ENST00000498107 PLBD2Q8NHP8 589 aa20.48■□□□□ 0.87
SSBP1-214ENST00000498107 TBC1D9BQ66K14 1250 aa20.47■□□□□ 0.87
SSBP1-214ENST00000498107 BICDL1Q6ZP65 573 aa20.47■□□□□ 0.87
SSBP1-214ENST00000498107 PHAXQ9H814 394 aaKnown RBP20.47■□□□□ 0.87
SSBP1-214ENST00000498107 CARMIL3Q8ND23 1372 aa20.46■□□□□ 0.87
SSBP1-214ENST00000498107 NUP98P52948 1817 aa20.46■□□□□ 0.87
SSBP1-214ENST00000498107 POLRMTO00411 1230 aaKnown RBP20.46■□□□□ 0.87
SSBP1-214ENST00000498107 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
SSBP1-214ENST00000498107 HLFQ16534 295 aa20.46■□□□□ 0.87
SSBP1-214ENST00000498107 NIP7Q9Y221 180 aaKnown RBP eCLIP20.46■□□□□ 0.87
SSBP1-214ENST00000498107 ATP10DQ9P241 1426 aa20.45■□□□□ 0.86
SSBP1-214ENST00000498107 DDR1Q08345 913 aa20.45■□□□□ 0.86
SSBP1-214ENST00000498107 ALDH1L2Q3SY69 923 aa20.45■□□□□ 0.86
SSBP1-214ENST00000498107 RIC3Q7Z5B4 369 aa20.45■□□□□ 0.86
SSBP1-214ENST00000498107 SERPINB2P05120 415 aa20.44■□□□□ 0.86
SSBP1-214ENST00000498107 FLIIQ13045 1269 aa20.44■□□□□ 0.86
SSBP1-214ENST00000498107 CD2APQ9Y5K6 639 aa20.44■□□□□ 0.86
SSBP1-214ENST00000498107 NPHP1O15259 732 aa20.43■□□□□ 0.86
SSBP1-214ENST00000498107 PARP10Q53GL7 1025 aa20.43■□□□□ 0.86
SSBP1-214ENST00000498107 TCIRG1Q13488 830 aa20.42■□□□□ 0.86
SSBP1-214ENST00000498107 KSR2Q6VAB6 950 aa20.42■□□□□ 0.86
SSBP1-214ENST00000498107 ZNF34Q8IZ26 560 aa20.42■□□□□ 0.86
SSBP1-214ENST00000498107 KLHL34Q8N239 644 aa20.42■□□□□ 0.86
SSBP1-214ENST00000498107 NYXQ9GZU5 481 aa20.42■□□□□ 0.86
SSBP1-214ENST00000498107 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
SSBP1-214ENST00000498107 TPTE2Q6XPS3 522 aa20.41■□□□□ 0.86
SSBP1-214ENST00000498107 NBPF5PQ86XG9 351 aaPredicted RBP20.41■□□□□ 0.86
SSBP1-214ENST00000498107 FHDC1Q9C0D6 1143 aaPredicted RBP20.41■□□□□ 0.86
SSBP1-214ENST00000498107 ANKRD36CQ5JPF3 1778 aa20.4■□□□□ 0.86
SSBP1-214ENST00000498107 G2E3Q7L622 706 aa20.4■□□□□ 0.86
SSBP1-214ENST00000498107 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
SSBP1-214ENST00000498107 CNBD1Q8NA66 436 aa20.4■□□□□ 0.86
SSBP1-214ENST00000498107 SSH1Q8WYL5 1049 aa20.4■□□□□ 0.86
SSBP1-214ENST00000498107 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
SSBP1-214ENST00000498107 NRXN2Q9P2S2 1712 aa20.39■□□□□ 0.86
SSBP1-214ENST00000498107 C10orf71Q711Q0 1435 aa20.39■□□□□ 0.85
SSBP1-214ENST00000498107 IBTKQ9P2D0 1353 aaPredicted RBP20.39■□□□□ 0.85
SSBP1-214ENST00000498107 GPTP24298 496 aa20.39■□□□□ 0.85
SSBP1-214ENST00000498107 GTF2E1P29083 439 aaPredicted RBP20.39■□□□□ 0.85
SSBP1-214ENST00000498107 ST5P78524 1137 aa20.39■□□□□ 0.85
SSBP1-214ENST00000498107 NEXNQ0ZGT2 675 aa20.39■□□□□ 0.85
SSBP1-214ENST00000498107 MRPL50Q8N5N7 158 aaKnown RBP20.39■□□□□ 0.85
SSBP1-214ENST00000498107 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
SSBP1-214ENST00000498107 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
SSBP1-214ENST00000498107 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.85
SSBP1-214ENST00000498107 RNF123Q5XPI4 1314 aa20.38■□□□□ 0.85
SSBP1-214ENST00000498107 PI4KAP2A4QPH2 592 aa20.38■□□□□ 0.85
SSBP1-214ENST00000498107 PI4KAP1Q8N8J0 262 aa20.38■□□□□ 0.85
SSBP1-214ENST00000498107 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
SSBP1-214ENST00000498107 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
SSBP1-214ENST00000498107 MAP3K2Q9Y2U5 619 aa20.38■□□□□ 0.85
SSBP1-214ENST00000498107 PTPRCP08575 1304 aa20.37■□□□□ 0.85
SSBP1-214ENST00000498107 TGFB2P61812 414 aa20.37■□□□□ 0.85
SSBP1-214ENST00000498107 TRIM28Q13263 835 aaKnown RBP20.37■□□□□ 0.85
SSBP1-214ENST00000498107 PRR5LQ6MZQ0 368 aa20.37■□□□□ 0.85
SSBP1-214ENST00000498107 KIF13BQ9NQT8 1826 aa20.37■□□□□ 0.85
SSBP1-214ENST00000498107 UBN2Q6ZU65 1347 aa20.36■□□□□ 0.85
SSBP1-214ENST00000498107 RARSP54136 660 aaKnown RBP20.36■□□□□ 0.85
SSBP1-214ENST00000498107 BRPF1P55201 1214 aaPredicted RBP20.36■□□□□ 0.85
SSBP1-214ENST00000498107 NLRP10Q86W26 655 aa20.36■□□□□ 0.85
SSBP1-214ENST00000498107 DNAAF4Q8WXU2 420 aa20.36■□□□□ 0.85
SSBP1-214ENST00000498107 ISCA1Q9BUE6 129 aa20.36■□□□□ 0.85
SSBP1-214ENST00000498107 UTP14AQ9BVJ6 771 aaKnown RBP20.36■□□□□ 0.85
SSBP1-214ENST00000498107 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
SSBP1-214ENST00000498107 ADCY9O60503 1353 aa20.35■□□□□ 0.85
SSBP1-214ENST00000498107 FAM177BA6PVY3 158 aa20.35■□□□□ 0.85
SSBP1-214ENST00000498107 SUSD4Q5VX71 490 aa20.35■□□□□ 0.85
SSBP1-214ENST00000498107 MYD88Q99836 296 aa20.35■□□□□ 0.85
SSBP1-214ENST00000498107 BRIP1Q9BX63 1249 aa20.35■□□□□ 0.85
SSBP1-214ENST00000498107 KIF16BQ96L93 1317 aa20.34■□□□□ 0.85
SSBP1-214ENST00000498107 PDE6BP35913 854 aa20.34■□□□□ 0.85
SSBP1-214ENST00000498107 CCDC191Q8NCU4 936 aa20.34■□□□□ 0.85
SSBP1-214ENST00000498107 BCL2L13Q9BXK5 485 aa20.34■□□□□ 0.85
SSBP1-214ENST00000498107 ATP5J2-PTCD1G3V325 749 aa20.33■□□□□ 0.85
SSBP1-214ENST00000498107 TRMT112Q9UI30 125 aaKnown RBP20.33■□□□□ 0.85
SSBP1-214ENST00000498107 NTSR2O95665 410 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms