RNA–Protein interactions for RNA: ENST00000497316.5

COL1A2-212, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 962 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-212ENST00000497316 DDX21Q9NR30 783 aaKnown RBP eCLIP20.84■□□□□ 0.93
COL1A2-212ENST00000497316 CARMIL3Q8ND23 1372 aa20.84■□□□□ 0.93
COL1A2-212ENST00000497316 MAP3K15Q6ZN16 1313 aa20.83■□□□□ 0.93
COL1A2-212ENST00000497316 PXDNLA1KZ92 1463 aa20.83■□□□□ 0.93
COL1A2-212ENST00000497316 SENP3-EIF4A1A0A087X0R7 540 aa20.83■□□□□ 0.93
COL1A2-212ENST00000497316 HDGFL1Q5TGJ6 251 aa20.83■□□□□ 0.93
COL1A2-212ENST00000497316 BICDL1Q6ZP65 573 aa20.83■□□□□ 0.93
COL1A2-212ENST00000497316 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
COL1A2-212ENST00000497316 KIF6Q6ZMV9 814 aa20.82■□□□□ 0.92
COL1A2-212ENST00000497316 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
COL1A2-212ENST00000497316 PROSER3Q2NL68 480 aa20.81■□□□□ 0.92
COL1A2-212ENST00000497316 TTLL7Q6ZT98 887 aa20.81■□□□□ 0.92
COL1A2-212ENST00000497316 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
COL1A2-212ENST00000497316 HLFQ16534 295 aa20.8■□□□□ 0.92
COL1A2-212ENST00000497316 C8orf58Q8NAV2 365 aa20.8■□□□□ 0.92
COL1A2-212ENST00000497316 NECTIN2Q92692 538 aa20.8■□□□□ 0.92
COL1A2-212ENST00000497316 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
COL1A2-212ENST00000497316 NUP98P52948 1817 aa20.79■□□□□ 0.92
COL1A2-212ENST00000497316 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
COL1A2-212ENST00000497316 ATP10DQ9P241 1426 aa20.78■□□□□ 0.92
COL1A2-212ENST00000497316 N4BP2Q86UW6 1770 aaPredicted RBP20.78■□□□□ 0.92
COL1A2-212ENST00000497316 A0A0G2JLW4 131 aa20.78■□□□□ 0.92
COL1A2-212ENST00000497316 ANXA1P04083 346 aa20.78■□□□□ 0.92
COL1A2-212ENST00000497316 DPEP1P16444 411 aa20.78■□□□□ 0.92
COL1A2-212ENST00000497316 PRR5LQ6MZQ0 368 aa20.78■□□□□ 0.92
COL1A2-212ENST00000497316 GIGYF2Q6Y7W6 1299 aaKnown RBP20.78■□□□□ 0.92
COL1A2-212ENST00000497316 TSR2Q969E8 191 aaKnown RBP20.78■□□□□ 0.92
COL1A2-212ENST00000497316 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.92
COL1A2-212ENST00000497316 ZNF521Q96K83 1311 aa20.78■□□□□ 0.92
COL1A2-212ENST00000497316 YBX3P16989 372 aaKnown RBP eCLIP20.77■□□□□ 0.92
COL1A2-212ENST00000497316 COPS6Q7L5N1 327 aa20.77■□□□□ 0.92
COL1A2-212ENST00000497316 HYPKQ9NX55 129 aa20.77■□□□□ 0.92
COL1A2-212ENST00000497316 PDZRN3Q9UPQ7 1066 aa20.77■□□□□ 0.92
COL1A2-212ENST00000497316 BRCA1P38398 1863 aaKnown RBP20.76■□□□□ 0.91
COL1A2-212ENST00000497316 ELL2O00472 640 aaPredicted RBP20.76■□□□□ 0.91
COL1A2-212ENST00000497316 KCNA3P22001 575 aa20.76■□□□□ 0.91
COL1A2-212ENST00000497316 CNBD1Q8NA66 436 aa20.76■□□□□ 0.91
COL1A2-212ENST00000497316 XAGE3Q8WTP9 111 aa20.76■□□□□ 0.91
COL1A2-212ENST00000497316 BRIP1Q9BX63 1249 aa20.76■□□□□ 0.91
COL1A2-212ENST00000497316 ZBTB3Q9H5J0 574 aa20.76■□□□□ 0.91
COL1A2-212ENST00000497316 FANCIQ9NVI1 1328 aa20.76■□□□□ 0.91
COL1A2-212ENST00000497316 CCDC30Q5VVM6 783 aa20.75■□□□□ 0.91
COL1A2-212ENST00000497316 TPTE2Q6XPS3 522 aa20.75■□□□□ 0.91
COL1A2-212ENST00000497316 NBPF5PQ86XG9 351 aaPredicted RBP20.75■□□□□ 0.91
COL1A2-212ENST00000497316 ZNF34Q8IZ26 560 aa20.75■□□□□ 0.91
COL1A2-212ENST00000497316 MIER1Q8N108 512 aa20.75■□□□□ 0.91
COL1A2-212ENST00000497316 TSPYL6Q8N831 410 aa20.75■□□□□ 0.91
COL1A2-212ENST00000497316 ST5P78524 1137 aa20.74■□□□□ 0.91
COL1A2-212ENST00000497316 GOLGA2Q08379 1002 aa20.74■□□□□ 0.91
COL1A2-212ENST00000497316 MYH16Q9H6N6 1097 aa20.74■□□□□ 0.91
COL1A2-212ENST00000497316 PIM2Q9P1W9 311 aa20.74■□□□□ 0.91
COL1A2-212ENST00000497316 IBTKQ9P2D0 1353 aaPredicted RBP20.73■□□□□ 0.91
COL1A2-212ENST00000497316 ANKRD31Q8N7Z5 1873 aa20.73■□□□□ 0.91
COL1A2-212ENST00000497316 PDE6BP35913 854 aa20.73■□□□□ 0.91
COL1A2-212ENST00000497316 AIMP1Q12904 312 aaKnown RBP20.73■□□□□ 0.91
COL1A2-212ENST00000497316 TWISTNBQ3B726 338 aaPredicted RBP20.73■□□□□ 0.91
COL1A2-212ENST00000497316 HSP90AB3PQ58FF7 597 aa20.73■□□□□ 0.91
COL1A2-212ENST00000497316 DLEC1Q9Y238 1755 aa20.72■□□□□ 0.91
COL1A2-212ENST00000497316 NPHP1O15259 732 aa20.72■□□□□ 0.91
COL1A2-212ENST00000497316 CHRNA5P30532 468 aa20.72■□□□□ 0.91
COL1A2-212ENST00000497316 PLBD2Q8NHP8 589 aa20.72■□□□□ 0.91
COL1A2-212ENST00000497316 NYXQ9GZU5 481 aa20.72■□□□□ 0.91
COL1A2-212ENST00000497316 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
COL1A2-212ENST00000497316 PARP10Q53GL7 1025 aa20.71■□□□□ 0.91
COL1A2-212ENST00000497316 ANKRD13DQ6ZTN6 518 aa20.71■□□□□ 0.91
COL1A2-212ENST00000497316 ANKRD36CQ5JPF3 1778 aa20.7■□□□□ 0.9
COL1A2-212ENST00000497316 H0YIN7 160 aa20.7■□□□□ 0.9
COL1A2-212ENST00000497316 TCIRG1Q13488 830 aa20.7■□□□□ 0.9
COL1A2-212ENST00000497316 C2CD5Q86YS7 1000 aa20.7■□□□□ 0.9
COL1A2-212ENST00000497316 UBN2Q6ZU65 1347 aa20.7■□□□□ 0.9
COL1A2-212ENST00000497316 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
COL1A2-212ENST00000497316 KLRG2A4D1S0 409 aaPredicted RBP20.69■□□□□ 0.9
COL1A2-212ENST00000497316 DALRD3Q5D0E6 543 aaKnown RBP20.69■□□□□ 0.9
COL1A2-212ENST00000497316 BCS1LQ9Y276 419 aa20.69■□□□□ 0.9
COL1A2-212ENST00000497316 VAMP4O75379 141 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 GPTP24298 496 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
COL1A2-212ENST00000497316 SUSD4Q5VX71 490 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 PPP1R42Q7Z4L9 355 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 CCDC24Q8N4L8 307 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 STK31Q9BXU1 1019 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 WWC3Q9ULE0 1092 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 RIC1Q4ADV7 1423 aa20.68■□□□□ 0.9
COL1A2-212ENST00000497316 GTF2E1P29083 439 aaPredicted RBP20.67■□□□□ 0.9
COL1A2-212ENST00000497316 PHAXQ9H814 394 aaKnown RBP20.67■□□□□ 0.9
COL1A2-212ENST00000497316 RNF123Q5XPI4 1314 aa20.67■□□□□ 0.9
COL1A2-212ENST00000497316 FAM177BA6PVY3 158 aa20.66■□□□□ 0.9
COL1A2-212ENST00000497316 E9PSI1 815 aa20.66■□□□□ 0.9
COL1A2-212ENST00000497316 NTSR2O95665 410 aa20.66■□□□□ 0.9
COL1A2-212ENST00000497316 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
COL1A2-212ENST00000497316 CACNA1FO60840 1977 aa20.66■□□□□ 0.9
COL1A2-212ENST00000497316 COL11A2P13942 1736 aaPredicted RBP20.65■□□□□ 0.9
COL1A2-212ENST00000497316 SRGNP10124 158 aa20.65■□□□□ 0.9
COL1A2-212ENST00000497316 STYK1Q6J9G0 422 aa20.65■□□□□ 0.9
COL1A2-212ENST00000497316 NLRP10Q86W26 655 aa20.65■□□□□ 0.9
COL1A2-212ENST00000497316 ARFGEF2Q9Y6D5 1785 aa20.64■□□□□ 0.9
COL1A2-212ENST00000497316 DDX58O95786 925 aaKnown RBP20.64■□□□□ 0.89
COL1A2-212ENST00000497316 C1QTNF8P60827 252 aa20.64■□□□□ 0.89
COL1A2-212ENST00000497316 TRIM28Q13263 835 aaKnown RBP20.64■□□□□ 0.89
COL1A2-212ENST00000497316 MASTLQ96GX5 879 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms