RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 BRIP1Q9BX63 1249 aa18.84■□□□□ 0.61
VTI1A-209ENST00000496445 SLX4Q8IY92 1834 aa18.84■□□□□ 0.61
VTI1A-209ENST00000496445 TMPOP42166 694 aaKnown RBP18.83■□□□□ 0.6
VTI1A-209ENST00000496445 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
VTI1A-209ENST00000496445 PDE6BP35913 854 aa18.82■□□□□ 0.6
VTI1A-209ENST00000496445 PRELPP51888 382 aa18.82■□□□□ 0.6
VTI1A-209ENST00000496445 HLFQ16534 295 aa18.82■□□□□ 0.6
VTI1A-209ENST00000496445 RNF181Q9P0P0 153 aa18.82■□□□□ 0.6
VTI1A-209ENST00000496445 ZNF652Q9Y2D9 606 aa18.82■□□□□ 0.6
VTI1A-209ENST00000496445 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
VTI1A-209ENST00000496445 RGL2O15211 777 aa18.81■□□□□ 0.6
VTI1A-209ENST00000496445 ST5P78524 1137 aa18.81■□□□□ 0.6
VTI1A-209ENST00000496445 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
VTI1A-209ENST00000496445 TSPYL4Q9UJ04 414 aa18.81■□□□□ 0.6
VTI1A-209ENST00000496445 RRP7AQ9Y3A4 280 aaKnown RBP18.81■□□□□ 0.6
VTI1A-209ENST00000496445 PDZRN3Q9UPQ7 1066 aa18.8■□□□□ 0.6
VTI1A-209ENST00000496445 NFKBIEO00221 500 aa18.79■□□□□ 0.6
VTI1A-209ENST00000496445 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
VTI1A-209ENST00000496445 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
VTI1A-209ENST00000496445 ZNF622Q969S3 477 aaKnown RBP eCLIP18.79■□□□□ 0.6
VTI1A-209ENST00000496445 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
VTI1A-209ENST00000496445 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
VTI1A-209ENST00000496445 SRGNP10124 158 aa18.78■□□□□ 0.6
VTI1A-209ENST00000496445 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
VTI1A-209ENST00000496445 NGEFQ8N5V2 710 aa18.78■□□□□ 0.6
VTI1A-209ENST00000496445 ANKRD36CQ5JPF3 1778 aa18.78■□□□□ 0.6
VTI1A-209ENST00000496445 NPHP1O15259 732 aa18.77■□□□□ 0.6
VTI1A-209ENST00000496445 MYL6BP14649 208 aa18.77■□□□□ 0.6
VTI1A-209ENST00000496445 WDR43Q15061 677 aaKnown RBP eCLIP18.77■□□□□ 0.6
VTI1A-209ENST00000496445 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
VTI1A-209ENST00000496445 RUNDC1Q96C34 613 aa18.77■□□□□ 0.6
VTI1A-209ENST00000496445 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
VTI1A-209ENST00000496445 TRIM35Q9UPQ4 493 aa18.77■□□□□ 0.6
VTI1A-209ENST00000496445 ERBB4Q15303 1308 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 MAP3K15Q6ZN16 1313 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 LMNB1P20700 586 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 STYK1Q6J9G0 422 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 LRP10Q7Z4F1 713 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 ABCC12Q96J65 1359 aa18.76■□□□□ 0.59
VTI1A-209ENST00000496445 KLRG2A4D1S0 409 aaPredicted RBP18.75■□□□□ 0.59
VTI1A-209ENST00000496445 ERVV-1B6SEH8 477 aa18.75■□□□□ 0.59
VTI1A-209ENST00000496445 C21orf2O43822 256 aa18.75■□□□□ 0.59
VTI1A-209ENST00000496445 PDIA6Q15084 440 aa18.75■□□□□ 0.59
VTI1A-209ENST00000496445 PRPF40BQ6NWY9 871 aaKnown RBP18.75■□□□□ 0.59
VTI1A-209ENST00000496445 MASTLQ96GX5 879 aa18.75■□□□□ 0.59
VTI1A-209ENST00000496445 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
VTI1A-209ENST00000496445 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
VTI1A-209ENST00000496445 FAM177BA6PVY3 158 aa18.74■□□□□ 0.59
VTI1A-209ENST00000496445 KIF6Q6ZMV9 814 aa18.74■□□□□ 0.59
VTI1A-209ENST00000496445 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
VTI1A-209ENST00000496445 PROSER3Q2NL68 480 aa18.73■□□□□ 0.59
VTI1A-209ENST00000496445 TPTE2Q6XPS3 522 aa18.73■□□□□ 0.59
VTI1A-209ENST00000496445 CNKSR1Q969H4 720 aa18.73■□□□□ 0.59
VTI1A-209ENST00000496445 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
VTI1A-209ENST00000496445 IBTKQ9P2D0 1353 aaPredicted RBP18.72■□□□□ 0.59
VTI1A-209ENST00000496445 HSPA6P17066 643 aa18.72■□□□□ 0.59
VTI1A-209ENST00000496445 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
VTI1A-209ENST00000496445 RIC1Q4ADV7 1423 aa18.72■□□□□ 0.59
VTI1A-209ENST00000496445 KDM2BQ8NHM5 1336 aa18.72■□□□□ 0.59
VTI1A-209ENST00000496445 WDR90Q96KV7 1748 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 CHL1O00533 1208 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 TOMM70O94826 608 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 ANXA1P04083 346 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 NPR1P16066 1061 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 EIF2S2P20042 333 aaKnown RBP18.71■□□□□ 0.59
VTI1A-209ENST00000496445 KRT24Q2M2I5 525 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 NUTM1Q86Y26 1132 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 LTBP3Q9NS15 1303 aa18.71■□□□□ 0.59
VTI1A-209ENST00000496445 LAMB2P55268 1798 aa18.7■□□□□ 0.58
VTI1A-209ENST00000496445 GPTP24298 496 aa18.7■□□□□ 0.58
VTI1A-209ENST00000496445 C7orf43Q8WVR3 580 aa18.7■□□□□ 0.58
VTI1A-209ENST00000496445 GIGYF2Q6Y7W6 1299 aaKnown RBP18.69■□□□□ 0.58
VTI1A-209ENST00000496445 ZNF34Q8IZ26 560 aa18.69■□□□□ 0.58
VTI1A-209ENST00000496445 TAOK3Q9H2K8 898 aa18.69■□□□□ 0.58
VTI1A-209ENST00000496445 RRAGCQ9HB90 399 aa18.69■□□□□ 0.58
VTI1A-209ENST00000496445 SNED1Q8TER0 1413 aa18.68■□□□□ 0.58
VTI1A-209ENST00000496445 ERFEQ4G0M1 354 aa18.68■□□□□ 0.58
VTI1A-209ENST00000496445 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
VTI1A-209ENST00000496445 NECTIN2Q92692 538 aa18.68■□□□□ 0.58
VTI1A-209ENST00000496445 NYXQ9GZU5 481 aa18.68■□□□□ 0.58
VTI1A-209ENST00000496445 LAS1LQ9Y4W2 734 aaKnown RBP18.68■□□□□ 0.58
VTI1A-209ENST00000496445 GLTPD2A6NH11 291 aa18.67■□□□□ 0.58
VTI1A-209ENST00000496445 NTSR2O95665 410 aa18.67■□□□□ 0.58
VTI1A-209ENST00000496445 CRY2Q49AN0 593 aa18.67■□□□□ 0.58
VTI1A-209ENST00000496445 OLFM4Q6UX06 510 aa18.67■□□□□ 0.58
VTI1A-209ENST00000496445 RBM46Q8TBY0 533 aaKnown RBP18.67■□□□□ 0.58
VTI1A-209ENST00000496445 GTF2E1P29083 439 aaPredicted RBP18.66■□□□□ 0.58
VTI1A-209ENST00000496445 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
VTI1A-209ENST00000496445 CCDC93Q567U6 631 aa18.65■□□□□ 0.58
VTI1A-209ENST00000496445 XAGE3Q8WTP9 111 aa18.65■□□□□ 0.58
VTI1A-209ENST00000496445 DDX60Q8IY21 1712 aaKnown RBP18.64■□□□□ 0.57
VTI1A-209ENST00000496445 APAF1O14727 1248 aa18.64■□□□□ 0.57
VTI1A-209ENST00000496445 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.57
VTI1A-209ENST00000496445 CCDC184Q52MB2 194 aa18.64■□□□□ 0.57
VTI1A-209ENST00000496445 CFAP44Q96MT7 982 aa18.64■□□□□ 0.57
VTI1A-209ENST00000496445 HOXB7P09629 217 aa18.63■□□□□ 0.57
VTI1A-209ENST00000496445 ZNF853P0CG23 659 aa18.63■□□□□ 0.57
VTI1A-209ENST00000496445 C3orf67Q6ZVT6 689 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms