RNA–Protein interactions for RNA: ENST00000496152.1

NDUFAF3-206, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 3, humanhuman

TSL 2

Gene NDUFAF3, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3-206ENST00000496152 AFDNP55196 1824 aaKnown RBP16.23■□□□□ 0.19
NDUFAF3-206ENST00000496152 CCDC93Q567U6 631 aa16.22■□□□□ 0.19
NDUFAF3-206ENST00000496152 MAP1SQ66K74 1059 aaPredicted RBP16.22■□□□□ 0.19
NDUFAF3-206ENST00000496152 PANK3Q9H999 370 aa16.22■□□□□ 0.19
NDUFAF3-206ENST00000496152 ZNF541Q9H0D2 1346 aa16.21■□□□□ 0.19
NDUFAF3-206ENST00000496152 DLEC1Q9Y238 1755 aa16.21■□□□□ 0.19
NDUFAF3-206ENST00000496152 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
NDUFAF3-206ENST00000496152 ST5P78524 1137 aa16.21■□□□□ 0.19
NDUFAF3-206ENST00000496152 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
NDUFAF3-206ENST00000496152 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
NDUFAF3-206ENST00000496152 ABT1Q9ULW3 272 aaKnown RBP16.21■□□□□ 0.19
NDUFAF3-206ENST00000496152 NPHP1O15259 732 aa16.2■□□□□ 0.18
NDUFAF3-206ENST00000496152 CAMTA2O94983 1202 aa16.2■□□□□ 0.18
NDUFAF3-206ENST00000496152 MTHFSDQ2M296 383 aaKnown RBP16.2■□□□□ 0.18
NDUFAF3-206ENST00000496152 ZNF277Q9NRM2 450 aaPredicted RBP16.2■□□□□ 0.18
NDUFAF3-206ENST00000496152 FZD9O00144 591 aa16.19■□□□□ 0.18
NDUFAF3-206ENST00000496152 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
NDUFAF3-206ENST00000496152 ZNF496Q96IT1 587 aaPredicted RBP16.19■□□□□ 0.18
NDUFAF3-206ENST00000496152 BEGAINQ9BUH8 593 aa16.19■□□□□ 0.18
NDUFAF3-206ENST00000496152 DDX21Q9NR30 783 aaKnown RBP eCLIP16.19■□□□□ 0.18
NDUFAF3-206ENST00000496152 CCDC88AQ3V6T2 1871 aa16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 MRC1P22897 1456 aa16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 KLRG2A4D1S0 409 aaPredicted RBP16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 NPR1P16066 1061 aa16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 ECE1P42892 770 aa16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 RTKN2Q8IZC4 609 aa16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 GPR101Q96P66 508 aaPredicted RBP16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 ZNF330Q9Y3S2 320 aaPredicted RBP16.18■□□□□ 0.18
NDUFAF3-206ENST00000496152 FER1L6Q2WGJ9 1857 aa16.17■□□□□ 0.18
NDUFAF3-206ENST00000496152 GPC2Q8N158 579 aa16.17■□□□□ 0.18
NDUFAF3-206ENST00000496152 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
NDUFAF3-206ENST00000496152 A1BGP04217 495 aa16.16■□□□□ 0.18
NDUFAF3-206ENST00000496152 HMOX1P09601 288 aa16.16■□□□□ 0.18
NDUFAF3-206ENST00000496152 NPM2Q86SE8 214 aaKnown RBP16.16■□□□□ 0.18
NDUFAF3-206ENST00000496152 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
NDUFAF3-206ENST00000496152 HEG1Q9ULI3 1381 aa16.15■□□□□ 0.18
NDUFAF3-206ENST00000496152 IARSP41252 1262 aaKnown RBP16.15■□□□□ 0.18
NDUFAF3-206ENST00000496152 ZNF790Q6PG37 636 aa16.15■□□□□ 0.18
NDUFAF3-206ENST00000496152 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
NDUFAF3-206ENST00000496152 DICER1Q9UPY3 1922 aaKnown RBP16.15■□□□□ 0.18
NDUFAF3-206ENST00000496152 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
NDUFAF3-206ENST00000496152 MAP2K2P36507 400 aa16.14■□□□□ 0.17
NDUFAF3-206ENST00000496152 FMR1Q06787 632 aaKnown RBP eCLIP16.14■□□□□ 0.17
NDUFAF3-206ENST00000496152 CYP4F22Q6NT55 531 aa16.14■□□□□ 0.17
NDUFAF3-206ENST00000496152 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
NDUFAF3-206ENST00000496152 NBPF5PQ86XG9 351 aaPredicted RBP16.14■□□□□ 0.17
NDUFAF3-206ENST00000496152 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
NDUFAF3-206ENST00000496152 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
NDUFAF3-206ENST00000496152 SCN4AP35499 1836 aa16.13■□□□□ 0.17
NDUFAF3-206ENST00000496152 SLX4Q8IY92 1834 aa16.13■□□□□ 0.17
NDUFAF3-206ENST00000496152 CST9Q5W186 159 aa16.13■□□□□ 0.17
NDUFAF3-206ENST00000496152 PAXIP1Q6ZW49 1069 aaPredicted RBP16.13■□□□□ 0.17
NDUFAF3-206ENST00000496152 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
NDUFAF3-206ENST00000496152 ANKRD31Q8N7Z5 1873 aa16.13■□□□□ 0.17
NDUFAF3-206ENST00000496152 VIRMAQ69YN4 1812 aaKnown RBP16.12■□□□□ 0.17
NDUFAF3-206ENST00000496152 TEFQ10587 303 aa16.12■□□□□ 0.17
NDUFAF3-206ENST00000496152 GRM1Q13255 1194 aa16.12■□□□□ 0.17
NDUFAF3-206ENST00000496152 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
NDUFAF3-206ENST00000496152 JDP2Q8WYK2 163 aa16.12■□□□□ 0.17
NDUFAF3-206ENST00000496152 FMNL2Q96PY5 1086 aa16.12■□□□□ 0.17
NDUFAF3-206ENST00000496152 MCOLN1Q9GZU1 580 aa16.12■□□□□ 0.17
NDUFAF3-206ENST00000496152 ALDH1B1P30837 517 aa16.11■□□□□ 0.17
NDUFAF3-206ENST00000496152 CFAP44Q96MT7 982 aa16.11■□□□□ 0.17
NDUFAF3-206ENST00000496152 TSKSQ9UJT2 592 aa16.11■□□□□ 0.17
NDUFAF3-206ENST00000496152 GJA3Q9Y6H8 435 aa16.11■□□□□ 0.17
NDUFAF3-206ENST00000496152 TLL2Q9Y6L7 1015 aa16.11■□□□□ 0.17
NDUFAF3-206ENST00000496152 CA12O43570 354 aa16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 AOC2O75106 756 aa16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 LMOD1P29536 600 aaPredicted RBP16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 EPS15P42566 896 aa16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 EIF6P56537 245 aaKnown RBP16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 PSMD1Q99460 953 aa16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 KNSTRNQ9Y448 316 aa16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 COL11A2P13942 1736 aaPredicted RBP16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 ADAMTSL1Q8N6G6 1762 aa16.1■□□□□ 0.17
NDUFAF3-206ENST00000496152 TRAF5O00463 557 aa16.09■□□□□ 0.17
NDUFAF3-206ENST00000496152 USP50Q70EL3 339 aaPredicted RBP16.09■□□□□ 0.17
NDUFAF3-206ENST00000496152 USP16Q9Y5T5 823 aa16.09■□□□□ 0.17
NDUFAF3-206ENST00000496152 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.16
NDUFAF3-206ENST00000496152 SCNN1DP51172 638 aa16.08■□□□□ 0.16
NDUFAF3-206ENST00000496152 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.16
NDUFAF3-206ENST00000496152 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
NDUFAF3-206ENST00000496152 RGL2O15211 777 aa16.07■□□□□ 0.16
NDUFAF3-206ENST00000496152 KCNQ3O43525 872 aa16.07■□□□□ 0.16
NDUFAF3-206ENST00000496152 DIAPH1O60610 1272 aaKnown RBP16.07■□□□□ 0.16
NDUFAF3-206ENST00000496152 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
NDUFAF3-206ENST00000496152 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
NDUFAF3-206ENST00000496152 SAPCD2Q86UD0 394 aa16.06■□□□□ 0.16
NDUFAF3-206ENST00000496152 GAS2L2Q8NHY3 880 aa16.06■□□□□ 0.16
NDUFAF3-206ENST00000496152 PIP4K2AP48426 406 aaPredicted RBP16.05■□□□□ 0.16
NDUFAF3-206ENST00000496152 BRPF1P55201 1214 aaPredicted RBP16.05■□□□□ 0.16
NDUFAF3-206ENST00000496152 DGKZQ13574 1117 aa16.05■□□□□ 0.16
NDUFAF3-206ENST00000496152 HHIPL1Q96JK4 782 aa16.05■□□□□ 0.16
NDUFAF3-206ENST00000496152 FAM177BA6PVY3 158 aa16.04■□□□□ 0.16
NDUFAF3-206ENST00000496152 BTBD11A6QL63 1104 aa16.04■□□□□ 0.16
NDUFAF3-206ENST00000496152 CRY2Q49AN0 593 aa16.04■□□□□ 0.16
NDUFAF3-206ENST00000496152 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
NDUFAF3-206ENST00000496152 SNED1Q8TER0 1413 aa16.03■□□□□ 0.16
NDUFAF3-206ENST00000496152 SCN7AQ01118 1682 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms