RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 NEURL1BA8MQ27 555 aa18.34■□□□□ 0.53
CHPF2-204ENST00000495645 GRM8O00222 908 aa18.34■□□□□ 0.53
CHPF2-204ENST00000495645 TTC22Q5TAA0 569 aa18.34■□□□□ 0.53
CHPF2-204ENST00000495645 LINS1Q8NG48 757 aa18.34■□□□□ 0.53
CHPF2-204ENST00000495645 LRRCC1Q9C099 1032 aa18.34■□□□□ 0.53
CHPF2-204ENST00000495645 KCNQ4P56696 695 aa18.34■□□□□ 0.53
CHPF2-204ENST00000495645 UBE2Q2Q8WVN8 375 aa18.34■□□□□ 0.53
CHPF2-204ENST00000495645 DDX58O95786 925 aaKnown RBP18.33■□□□□ 0.53
CHPF2-204ENST00000495645 PDE1AP54750 535 aa18.33■□□□□ 0.53
CHPF2-204ENST00000495645 UBE3BQ7Z3V4 1068 aa18.33■□□□□ 0.53
CHPF2-204ENST00000495645 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.53
CHPF2-204ENST00000495645 C22orf23Q9BZE7 217 aa18.33■□□□□ 0.53
CHPF2-204ENST00000495645 ABCC6O95255 1503 aa18.33■□□□□ 0.52
CHPF2-204ENST00000495645 MRC1P22897 1456 aa18.32■□□□□ 0.52
CHPF2-204ENST00000495645 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
CHPF2-204ENST00000495645 GCKRQ14397 625 aa18.32■□□□□ 0.52
CHPF2-204ENST00000495645 FAM98CQ17RN3 349 aaKnown RBP18.32■□□□□ 0.52
CHPF2-204ENST00000495645 PTF1AQ7RTS3 328 aa18.32■□□□□ 0.52
CHPF2-204ENST00000495645 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
CHPF2-204ENST00000495645 KCNQ2O43526 872 aa18.31■□□□□ 0.52
CHPF2-204ENST00000495645 METTL22Q9BUU2 404 aaPredicted RBP18.31■□□□□ 0.52
CHPF2-204ENST00000495645 OS9Q13438 667 aaPredicted RBP18.3■□□□□ 0.52
CHPF2-204ENST00000495645 POLA2Q14181 598 aa18.3■□□□□ 0.52
CHPF2-204ENST00000495645 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
CHPF2-204ENST00000495645 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
CHPF2-204ENST00000495645 NGLY1Q96IV0 654 aa18.3■□□□□ 0.52
CHPF2-204ENST00000495645 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
CHPF2-204ENST00000495645 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
CHPF2-204ENST00000495645 SHANK3Q9BYB0 1731 aa18.3■□□□□ 0.52
CHPF2-204ENST00000495645 SPATA31A1Q5TZJ5 1347 aa18.3■□□□□ 0.52
CHPF2-204ENST00000495645 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 RHPN1Q8TCX5 695 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 CCDC85AQ96PX6 553 aaPredicted RBP18.29■□□□□ 0.52
CHPF2-204ENST00000495645 PXDNLA1KZ92 1463 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 GLI3P10071 1580 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 A0A087WZG4 1122 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 NEXNQ0ZGT2 675 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 DDB1Q16531 1140 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 ALDH1L1O75891 902 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 RILPL2Q969X0 211 aa18.29■□□□□ 0.52
CHPF2-204ENST00000495645 TOGARAM1Q9Y4F4 1720 aa18.28■□□□□ 0.52
CHPF2-204ENST00000495645 MX1P20591 662 aa18.28■□□□□ 0.52
CHPF2-204ENST00000495645 CACNA1FO60840 1977 aa18.28■□□□□ 0.52
CHPF2-204ENST00000495645 COL22A1Q8NFW1 1626 aaPredicted RBP18.28■□□□□ 0.52
CHPF2-204ENST00000495645 DISP2A7MBM2 1401 aa18.28■□□□□ 0.52
CHPF2-204ENST00000495645 PARP4Q9UKK3 1724 aaKnown RBP18.28■□□□□ 0.52
CHPF2-204ENST00000495645 KCPQ6ZWJ8 1503 aa18.28■□□□□ 0.52
CHPF2-204ENST00000495645 TRIM6-TRIM34B2RNG4 842 aa18.27■□□□□ 0.51
CHPF2-204ENST00000495645 CHMP4AQ9BY43 222 aa18.27■□□□□ 0.51
CHPF2-204ENST00000495645 SALL3Q9BXA9 1300 aa18.27■□□□□ 0.51
CHPF2-204ENST00000495645 IL25Q9H293 177 aa18.26■□□□□ 0.51
CHPF2-204ENST00000495645 ZBTB1Q9Y2K1 713 aa18.26■□□□□ 0.51
CHPF2-204ENST00000495645 CHMP3Q9Y3E7 222 aa18.26■□□□□ 0.51
CHPF2-204ENST00000495645 GPTP24298 496 aa18.25■□□□□ 0.51
CHPF2-204ENST00000495645 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
CHPF2-204ENST00000495645 TLR7Q9NYK1 1049 aaKnown RBP18.25■□□□□ 0.51
CHPF2-204ENST00000495645 CDC45O75419 566 aa18.25■□□□□ 0.51
CHPF2-204ENST00000495645 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
CHPF2-204ENST00000495645 SASH1O94885 1247 aa18.24■□□□□ 0.51
CHPF2-204ENST00000495645 CD2BP2O95400 341 aaKnown RBP18.24■□□□□ 0.51
CHPF2-204ENST00000495645 HLFQ16534 295 aa18.24■□□□□ 0.51
CHPF2-204ENST00000495645 CCDC8Q9H0W5 538 aaPredicted RBP18.24■□□□□ 0.51
CHPF2-204ENST00000495645 TBC1D2BQ9UPU7 963 aa18.24■□□□□ 0.51
CHPF2-204ENST00000495645 NDUFB9Q9Y6M9 179 aa18.23■□□□□ 0.51
CHPF2-204ENST00000495645 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
CHPF2-204ENST00000495645 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
CHPF2-204ENST00000495645 KIF2CQ99661 725 aa18.23■□□□□ 0.51
CHPF2-204ENST00000495645 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
CHPF2-204ENST00000495645 BCL9O00512 1426 aa18.22■□□□□ 0.51
CHPF2-204ENST00000495645 LMBR1LQ6UX01 489 aa18.22■□□□□ 0.51
CHPF2-204ENST00000495645 FAM89AQ96GI7 184 aa18.22■□□□□ 0.51
CHPF2-204ENST00000495645 ZNF594Q96JF6 807 aaPredicted RBP18.22■□□□□ 0.51
CHPF2-204ENST00000495645 TNS2Q63HR2 1409 aa18.21■□□□□ 0.51
CHPF2-204ENST00000495645 FAM177BA6PVY3 158 aa18.21■□□□□ 0.51
CHPF2-204ENST00000495645 MTX1Q13505 466 aa18.21■□□□□ 0.5
CHPF2-204ENST00000495645 EAF2Q96CJ1 260 aaPredicted RBP18.21■□□□□ 0.5
CHPF2-204ENST00000495645 KIF1BPQ96EK5 621 aa18.21■□□□□ 0.5
CHPF2-204ENST00000495645 UTYO14607 1347 aa18.2■□□□□ 0.5
CHPF2-204ENST00000495645 HSPA1LP34931 641 aa18.2■□□□□ 0.5
CHPF2-204ENST00000495645 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
CHPF2-204ENST00000495645 CASP7P55210 303 aa18.2■□□□□ 0.5
CHPF2-204ENST00000495645 AACSQ86V21 672 aa18.2■□□□□ 0.5
CHPF2-204ENST00000495645 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
CHPF2-204ENST00000495645 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
CHPF2-204ENST00000495645 OSBPL3Q9H4L5 887 aa18.19■□□□□ 0.5
CHPF2-204ENST00000495645 EDC3Q96F86 508 aaKnown RBP18.18■□□□□ 0.5
CHPF2-204ENST00000495645 CHGBP05060 677 aa18.18■□□□□ 0.5
CHPF2-204ENST00000495645 BECN1Q14457 450 aa18.18■□□□□ 0.5
CHPF2-204ENST00000495645 PTPN12Q05209 780 aaKnown RBP18.17■□□□□ 0.5
CHPF2-204ENST00000495645 ITPK1Q13572 414 aa18.17■□□□□ 0.5
CHPF2-204ENST00000495645 STARD3NLO95772 234 aa18.17■□□□□ 0.5
CHPF2-204ENST00000495645 BCL9LQ86UU0 1499 aa18.17■□□□□ 0.5
CHPF2-204ENST00000495645 PLCH1Q4KWH8 1693 aa18.17■□□□□ 0.5
CHPF2-204ENST00000495645 ATP6V1AP38606 617 aa18.16■□□□□ 0.5
CHPF2-204ENST00000495645 FOXO4P98177 505 aa18.16■□□□□ 0.5
CHPF2-204ENST00000495645 G3BP1Q13283 466 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHPF2-204ENST00000495645 CWC25Q9NXE8 425 aaPredicted RBP18.16■□□□□ 0.5
CHPF2-204ENST00000495645 RAB11FIP3O75154 756 aa18.16■□□□□ 0.5
CHPF2-204ENST00000495645 RFX5P48382 616 aaPredicted RBP18.16■□□□□ 0.5
CHPF2-204ENST00000495645 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms